; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS018980 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018980
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionATP-dependent Clp protease proteolytic subunit
Genome locationscaffold20:451298..455130
RNA-Seq ExpressionMS018980
SyntenyMS018980
Gene Ontology termsGO:0006515 - protein quality control for misfolded or incompletely synthesized proteins (biological process)
GO:0009368 - endopeptidase Clp complex (cellular component)
GO:0009526 - plastid envelope (cellular component)
GO:0009570 - chloroplast stroma (cellular component)
GO:0004176 - ATP-dependent peptidase activity (molecular function)
GO:0004252 - serine-type endopeptidase activity (molecular function)
GO:0051117 - ATPase binding (molecular function)
InterPro domainsIPR001907 - ATP-dependent Clp protease proteolytic subunit
IPR018215 - ClpP, Ser active site
IPR023562 - Clp protease proteolytic subunit /Translocation-enhancing protein TepA
IPR029045 - ClpP/crotonase-like domain superfamily
IPR033135 - ClpP, histidine active site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7036637.1 ATP-dependent Clp protease proteolytic subunit 5, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]9.5e-16194.44Show/hide
Query:  MAHTFAYTSASSFRLNSLVSVPNSSSSSESQKLFLPLDPFQSRKLGKLVGGGRNLKNTPVKAIYSGEFSSLDRSSRQGLWSIRDDVQIPSSPYFPTYAQG
        MAHTF YTSASSFRLNSLVSVPNSSSSSESQKLFLPL+ F SRKLGKLVGGGRNLKN+PVKAIYSGEFSSLD+SSRQGLWSIRDDVQIPSSPYFPTYAQG
Subjt:  MAHTFAYTSASSFRLNSLVSVPNSSSSSESQKLFLPLDPFQSRKLGKLVGGGRNLKNTPVKAIYSGEFSSLDRSSRQGLWSIRDDVQIPSSPYFPTYAQG

Query:  QGPPPMVQERFHSVISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSA
        QGPPPMVQERF SVISQLFQ+RI+RCGGAVDDDMANIIVAQLLYLDAVDPNKDI++YVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSA
Subjt:  QGPPPMVQERFHSVISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSA

Query:  GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAAAAT
        GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEML+HKANLNGYLSYHTGQSLEKIN+DTDRDFFMSAKEA+EYGLIDGVIMNPLKA QPLAAAA+T
Subjt:  GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAAAAT

Query:  EAEPGA
        E EPGA
Subjt:  EAEPGA

XP_008454281.1 PREDICTED: ATP-dependent Clp protease proteolytic subunit 5, chloroplastic [Cucumis melo]1.9e-16194.44Show/hide
Query:  MAHTFAYTSASSFRLNSLVSVPNSSSSSESQKLFLPLDPFQSRKLGKLVGGGRNLKNTPVKAIYSGEFSSLDRSSRQGLWSIRDDVQIPSSPYFPTYAQG
        MAHTFAYTSASSFRLNSLVSVPNSSSSS+SQK FLPL+PF SRKLGKLVGGGRNLKN+PVKA+YSGEFSS+DR+SRQG+WSIRDDVQ+PSSPYFP YAQG
Subjt:  MAHTFAYTSASSFRLNSLVSVPNSSSSSESQKLFLPLDPFQSRKLGKLVGGGRNLKNTPVKAIYSGEFSSLDRSSRQGLWSIRDDVQIPSSPYFPTYAQG

Query:  QGPPPMVQERFHSVISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSA
        QGPPPMVQERF SVISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSA
Subjt:  QGPPPMVQERFHSVISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSA

Query:  GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAAAAT
        GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAK+YGLIDGVIMNPLKALQPLAAAA+T
Subjt:  GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAAAAT

Query:  EAEPGA
        E +P A
Subjt:  EAEPGA

XP_022155316.1 ATP-dependent Clp protease proteolytic subunit 5, chloroplastic [Momordica charantia]1.6e-16899.67Show/hide
Query:  MAHTFAYTSASSFRLNSLVSVPNSSSSSESQKLFLPLDPFQSRKLGKLVGGGRNLKNTPVKAIYSGEFSSLDRSSRQGLWSIRDDVQIPSSPYFPTYAQG
        MAHTFAYTSASSFRLNSLVSVPNSSSSSESQKLFLPLDPFQSRKLGKLVGGGRNLKNTPVKAIYS EFSSLDRSSRQGLWSIRDDVQIPSSPYFPTYAQG
Subjt:  MAHTFAYTSASSFRLNSLVSVPNSSSSSESQKLFLPLDPFQSRKLGKLVGGGRNLKNTPVKAIYSGEFSSLDRSSRQGLWSIRDDVQIPSSPYFPTYAQG

Query:  QGPPPMVQERFHSVISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSA
        QGPPPMVQERFHSVISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSA
Subjt:  QGPPPMVQERFHSVISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSA

Query:  GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAAAAT
        GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAAAAT
Subjt:  GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAAAAT

Query:  EAEPGA
        EAEPGA
Subjt:  EAEPGA

XP_022948813.1 ATP-dependent Clp protease proteolytic subunit 5, chloroplastic [Cucurbita moschata]1.8e-15993.46Show/hide
Query:  MAHTFAYTSASSFRLNSLVSVPNSSSSSESQKLFLPLDPFQSRKLGKLVGGGRNLKNTPVKAIYSGEFSSLDRSSRQGLWSIRDDVQIPSSPYFPTYAQG
        MAHTF YTSASSFRLNSLVSVPNSSSSSESQKLFLPL+ F SRKLGK VGGGRNLKN+PVKAIYSGEFSSLD+SSR+GLWSIRDDVQIPSSPYFPTYAQG
Subjt:  MAHTFAYTSASSFRLNSLVSVPNSSSSSESQKLFLPLDPFQSRKLGKLVGGGRNLKNTPVKAIYSGEFSSLDRSSRQGLWSIRDDVQIPSSPYFPTYAQG

Query:  QGPPPMVQERFHSVISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSA
        QGPPPMVQERF SVISQLFQ+RI+RCGGAVDDDMANIIVAQLLYLDAVDPNKDI++YVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSA
Subjt:  QGPPPMVQERFHSVISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSA

Query:  GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAAAAT
        GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEML+HKANLNGYLSYHTGQSLEKIN+DTDRDFFMSAKEA+EYGLIDGVIMNPLKA QPLAAAA+T
Subjt:  GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAAAAT

Query:  EAEPGA
        E EPG+
Subjt:  EAEPGA

XP_038906134.1 ATP-dependent Clp protease proteolytic subunit 5, chloroplastic [Benincasa hispida]1.6e-16096.01Show/hide
Query:  MAHTFAYTSASSFRLNSLVSVPNSSSSSESQKLFLPLDPFQSRKLGKLVGGGRNLKNTPVKAIYSGEFSSLDRSSRQGLWSIRDDVQIPSSPYFPTYAQG
        MAHTFAYTSASSFRLNSLVSVPNSSSSSES KLFLPL+PF SRKLGKLVGGGRNLKN+PVK++YSGE SSLDR+SRQG+WSIRDDVQIPSSPYFP YAQG
Subjt:  MAHTFAYTSASSFRLNSLVSVPNSSSSSESQKLFLPLDPFQSRKLGKLVGGGRNLKNTPVKAIYSGEFSSLDRSSRQGLWSIRDDVQIPSSPYFPTYAQG

Query:  QGPPPMVQERFHSVISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSA
        QGPPPMVQERF SVISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSA
Subjt:  QGPPPMVQERFHSVISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSA

Query:  GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAAAAT
        GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAAA T
Subjt:  GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAAAAT

Query:  E
        E
Subjt:  E

TrEMBL top hitse value%identityAlignment
A0A1S3BY88 ATP-dependent Clp protease proteolytic subunit9.3e-16294.44Show/hide
Query:  MAHTFAYTSASSFRLNSLVSVPNSSSSSESQKLFLPLDPFQSRKLGKLVGGGRNLKNTPVKAIYSGEFSSLDRSSRQGLWSIRDDVQIPSSPYFPTYAQG
        MAHTFAYTSASSFRLNSLVSVPNSSSSS+SQK FLPL+PF SRKLGKLVGGGRNLKN+PVKA+YSGEFSS+DR+SRQG+WSIRDDVQ+PSSPYFP YAQG
Subjt:  MAHTFAYTSASSFRLNSLVSVPNSSSSSESQKLFLPLDPFQSRKLGKLVGGGRNLKNTPVKAIYSGEFSSLDRSSRQGLWSIRDDVQIPSSPYFPTYAQG

Query:  QGPPPMVQERFHSVISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSA
        QGPPPMVQERF SVISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSA
Subjt:  QGPPPMVQERFHSVISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSA

Query:  GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAAAAT
        GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAK+YGLIDGVIMNPLKALQPLAAAA+T
Subjt:  GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAAAAT

Query:  EAEPGA
        E +P A
Subjt:  EAEPGA

A0A5A7TNH0 ATP-dependent Clp protease proteolytic subunit9.3e-16294.44Show/hide
Query:  MAHTFAYTSASSFRLNSLVSVPNSSSSSESQKLFLPLDPFQSRKLGKLVGGGRNLKNTPVKAIYSGEFSSLDRSSRQGLWSIRDDVQIPSSPYFPTYAQG
        MAHTFAYTSASSFRLNSLVSVPNSSSSS+SQK FLPL+PF SRKLGKLVGGGRNLKN+PVKA+YSGEFSS+DR+SRQG+WSIRDDVQ+PSSPYFP YAQG
Subjt:  MAHTFAYTSASSFRLNSLVSVPNSSSSSESQKLFLPLDPFQSRKLGKLVGGGRNLKNTPVKAIYSGEFSSLDRSSRQGLWSIRDDVQIPSSPYFPTYAQG

Query:  QGPPPMVQERFHSVISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSA
        QGPPPMVQERF SVISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSA
Subjt:  QGPPPMVQERFHSVISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSA

Query:  GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAAAAT
        GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAK+YGLIDGVIMNPLKALQPLAAAA+T
Subjt:  GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAAAAT

Query:  EAEPGA
        E +P A
Subjt:  EAEPGA

A0A6J1DRD0 ATP-dependent Clp protease proteolytic subunit7.8e-16999.67Show/hide
Query:  MAHTFAYTSASSFRLNSLVSVPNSSSSSESQKLFLPLDPFQSRKLGKLVGGGRNLKNTPVKAIYSGEFSSLDRSSRQGLWSIRDDVQIPSSPYFPTYAQG
        MAHTFAYTSASSFRLNSLVSVPNSSSSSESQKLFLPLDPFQSRKLGKLVGGGRNLKNTPVKAIYS EFSSLDRSSRQGLWSIRDDVQIPSSPYFPTYAQG
Subjt:  MAHTFAYTSASSFRLNSLVSVPNSSSSSESQKLFLPLDPFQSRKLGKLVGGGRNLKNTPVKAIYSGEFSSLDRSSRQGLWSIRDDVQIPSSPYFPTYAQG

Query:  QGPPPMVQERFHSVISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSA
        QGPPPMVQERFHSVISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSA
Subjt:  QGPPPMVQERFHSVISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSA

Query:  GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAAAAT
        GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAAAAT
Subjt:  GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAAAAT

Query:  EAEPGA
        EAEPGA
Subjt:  EAEPGA

A0A6J1GAD0 ATP-dependent Clp protease proteolytic subunit8.7e-16093.46Show/hide
Query:  MAHTFAYTSASSFRLNSLVSVPNSSSSSESQKLFLPLDPFQSRKLGKLVGGGRNLKNTPVKAIYSGEFSSLDRSSRQGLWSIRDDVQIPSSPYFPTYAQG
        MAHTF YTSASSFRLNSLVSVPNSSSSSESQKLFLPL+ F SRKLGK VGGGRNLKN+PVKAIYSGEFSSLD+SSR+GLWSIRDDVQIPSSPYFPTYAQG
Subjt:  MAHTFAYTSASSFRLNSLVSVPNSSSSSESQKLFLPLDPFQSRKLGKLVGGGRNLKNTPVKAIYSGEFSSLDRSSRQGLWSIRDDVQIPSSPYFPTYAQG

Query:  QGPPPMVQERFHSVISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSA
        QGPPPMVQERF SVISQLFQ+RI+RCGGAVDDDMANIIVAQLLYLDAVDPNKDI++YVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSA
Subjt:  QGPPPMVQERFHSVISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSA

Query:  GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAAAAT
        GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEML+HKANLNGYLSYHTGQSLEKIN+DTDRDFFMSAKEA+EYGLIDGVIMNPLKA QPLAAAA+T
Subjt:  GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAAAAT

Query:  EAEPGA
        E EPG+
Subjt:  EAEPGA

A0A6J1K7I3 ATP-dependent Clp protease proteolytic subunit1.9e-15993.46Show/hide
Query:  MAHTFAYTSASSFRLNSLVSVPNSSSSSESQKLFLPLDPFQSRKLGKLVGGGRNLKNTPVKAIYSGEFSSLDRSSRQGLWSIRDDVQIPSSPYFPTYAQG
        MAHTF YTSASSFRLNSLVSVPNSSSSS+SQKLFLPL+ F SRKLGKLVGGGRNLKN+PVKAIYSGEFSSLD+SSRQGLWSIRDDVQIPSSPYFPTYAQG
Subjt:  MAHTFAYTSASSFRLNSLVSVPNSSSSSESQKLFLPLDPFQSRKLGKLVGGGRNLKNTPVKAIYSGEFSSLDRSSRQGLWSIRDDVQIPSSPYFPTYAQG

Query:  QGPPPMVQERFHSVISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSA
        QGPPPMVQERF SVISQLFQ+RI+RCGGAVDDDMANIIVAQLLYLDAVDPNKDI++YVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSA
Subjt:  QGPPPMVQERFHSVISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSA

Query:  GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAAAAT
        GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEML+HKANLNGYLSYHTGQSLEKIN+DTDRDFFMSAKEA+EYGLIDGVIMNPLKA QPLAAAA+T
Subjt:  GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAAAAT

Query:  EAEPGA
        E +P A
Subjt:  EAEPGA

SwissProt top hitse value%identityAlignment
P54416 ATP-dependent Clp protease proteolytic subunit 15.6e-6365.05Show/hide
Query:  ERFHSVISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYS
        +R   + S+L + RI+  G  V D+ AN++VAQLL+L+A DP KDI +Y+NSPGGSV+AG+ IFDTM  IRPDV T+C+GLAASMGAFLLSAG KGKR S
Subjt:  ERFHSVISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYS

Query:  LPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPL
        LPNSRIMIHQPLGGAQG  TDI+IQA E+L+ KA LN +L+ HTG+SLE+I  DT+RDFFMSA+E+KEYGLID VI     A  P+
Subjt:  LPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPL

Q2JIP1 ATP-dependent Clp protease proteolytic subunit 21.5e-6364.92Show/hide
Query:  ERFHSVISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYS
        ER   + S+L + RII  G  VDDD+AN+IVAQ+LYL++ DP KDI +Y+NSPGGSV AGMAI+DTM+HI+PDVST+C+GLAASMGAFLL+ GTKGKR +
Subjt:  ERFHSVISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYS

Query:  LPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAAAA
        LP++RIMIHQPLGGAQG  TDI+IQA E+L  K +LN  L+YHTGQ LE+I +DTDRD FM+ ++AKEYGLID VI    K  QP  AA +
Subjt:  LPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAAAA

Q3MFR5 ATP-dependent Clp protease proteolytic subunit 11.1e-6667.38Show/hide
Query:  ERFHSVISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYS
        ER   + S+L + RII  G  VD ++AN+IVAQLL+LDA DP KDI +Y+NSPGGSVTAGM IFDTM+HIRPDV T+C GLAASMGAFLLSAGTKGKR S
Subjt:  ERFHSVISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYS

Query:  LPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLA
        LP+SRIMIHQPLGGAQG  TDI+IQA E+L+HK  LN YL+ HTGQ +E+I +DT+RDFFMS  EA++YGLID VI       +P+A
Subjt:  LPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLA

Q8YXH5 ATP-dependent Clp protease proteolytic subunit 12.4e-6666.84Show/hide
Query:  ERFHSVISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYS
        ER   + S+L + RI+  G  VD ++AN+IVAQLL+LDA DP KDI +Y+NSPGGSVTAGM IFDTM+HIRPDV T+C GLAASMGAFLLSAG KGKR S
Subjt:  ERFHSVISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYS

Query:  LPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLA
        LP+SRIMIHQPLGGAQG  TDI+IQA E+L+HK  LN YL+ HTGQ +E+I +DT+RDFFMS  EAK+YGLID VI       +P+A
Subjt:  LPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLA

Q9S834 ATP-dependent Clp protease proteolytic subunit 5, chloroplastic4.9e-13682.89Show/hide
Query:  MAHTFAYTSASSFRLNS-LVSVPNSSSSSESQKLFLPLDPFQSRKLGKLVGGGRNLKNTPVKAIYSGEFSSLDRSSRQGLWSIRDDVQIPSSPYFPTYAQ
        MAH    TSASS R  +  VS   + SS +S KL LP +P +SRK  KLV   +N KN+  KA+YSG   + +  S QG+WSIRDD+Q+PSSPYFP YAQ
Subjt:  MAHTFAYTSASSFRLNS-LVSVPNSSSSSESQKLFLPLDPFQSRKLGKLVGGGRNLKNTPVKAIYSGEFSSLDRSSRQGLWSIRDDVQIPSSPYFPTYAQ

Query:  GQGPPPMVQERFHSVISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLS
        GQGPPPMVQERF S+ISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDP KDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLS
Subjt:  GQGPPPMVQERFHSVISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLS

Query:  AGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAA
        AGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYL+YHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAA
Subjt:  AGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAA

Arabidopsis top hitse value%identityAlignment
AT1G02560.1 nuclear encoded CLP protease 53.5e-13782.89Show/hide
Query:  MAHTFAYTSASSFRLNS-LVSVPNSSSSSESQKLFLPLDPFQSRKLGKLVGGGRNLKNTPVKAIYSGEFSSLDRSSRQGLWSIRDDVQIPSSPYFPTYAQ
        MAH    TSASS R  +  VS   + SS +S KL LP +P +SRK  KLV   +N KN+  KA+YSG   + +  S QG+WSIRDD+Q+PSSPYFP YAQ
Subjt:  MAHTFAYTSASSFRLNS-LVSVPNSSSSSESQKLFLPLDPFQSRKLGKLVGGGRNLKNTPVKAIYSGEFSSLDRSSRQGLWSIRDDVQIPSSPYFPTYAQ

Query:  GQGPPPMVQERFHSVISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLS
        GQGPPPMVQERF S+ISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDP KDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLS
Subjt:  GQGPPPMVQERFHSVISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLS

Query:  AGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAA
        AGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYL+YHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAA
Subjt:  AGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAA

AT1G11750.1 CLP protease proteolytic subunit 62.0e-3938.82Show/hide
Query:  KNTPVKAIYSGEFSSLDRSSRQGLWSIRDDVQIP---SSPYFPTYAQGQGPPPMVQERFH-----SVISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDA
        +  P++ I S   S    S + GL S      I     +P F      +G PP++           + S LF+ RII  G  ++  +A  +++QL+ L +
Subjt:  KNTPVKAIYSGEFSSLDRSSRQGLWSIRDDVQIP---SSPYFPTYAQGQGPPPMVQERFH-----SVISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDA

Query:  VDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGY
        +D   DI+MY+N PGGS  + +AI+D M  I+P V TV  G+AAS GA LL+ G KG RY++PN+R+MIHQP  G  G   D+  Q NE +  +  ++  
Subjt:  VDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGY

Query:  LSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVI
         +  TGQ LEK+ Q T+RD F+SA EA E+GLIDG++
Subjt:  LSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVI

AT1G66670.1 CLP protease proteolytic subunit 36.6e-5149.77Show/hide
Query:  SLDRSSRQGLWSIRDDVQIPSSPYFPTYAQGQGPPPMVQERFHSVISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGM
        SL +  RQ L S  D     SS    + AQ     P  +E      + L + RI+  G  VDD  A+++++QLL LDA D  +DI +++NSPGGS+TAGM
Subjt:  SLDRSSRQGLWSIRDDVQIPSSPYFPTYAQGQGPPPMVQERFHSVISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGM

Query:  AIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFM
         I+D M+  + DVSTVC+GLAASMGAFLL++G+KGKRY +PNS++MIHQPLG A G  T++ I+  EM++HK  LN   S  TG+   +I  DTDRD F+
Subjt:  AIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFM

Query:  SAKEAKEYGLIDGVI
        +  EAKEYGLID VI
Subjt:  SAKEAKEYGLIDGVI

AT5G23140.1 nuclear-encoded CLP protease P71.4e-4550Show/hide
Query:  ERFHSVISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYS
        ER + + S+L + RII   G ++DD ++++VAQLLYL++ +P+K I MY+NSPGG VTAG+AI+DTM++IR  +ST+C+G AASM + LL+AG KG+R S
Subjt:  ERFHSVISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYS

Query:  LPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVI
        LPN+ +MIHQP GG  G   DI I   +++     LN     HTGQ L+ +  + DRD FM+ +EAK +G+ID VI
Subjt:  LPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVI

AT5G45390.1 CLP protease P45.2e-4852.63Show/hide
Query:  VISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSR
        V+  L + RI+  G ++DD +A+ I++QLL LDA DP KDI +++NSPGGS++A MAI+D ++ +R DVST+ +G+AAS  + +L AGTKGKR+++PN+R
Subjt:  VISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSR

Query:  IMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVI
        IMIHQPLGGA G   D++IQA E++H+K N+   ++  T +S E++ +D DRD +MS  EA EYGLIDGVI
Subjt:  IMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCATACTTTCGCCTACACGTCTGCCTCGTCTTTCAGATTAAACTCCCTCGTTTCTGTTCCCAATTCTAGCTCTTCTTCCGAGTCCCAGAAGCTCTTTCTCCCCCT
GGACCCTTTTCAGTCGAGGAAACTAGGAAAATTAGTTGGAGGTGGAAGAAACCTCAAGAATACTCCAGTCAAAGCCATCTACTCAGGCGAGTTTTCATCTCTGGATAGGA
GTTCTCGCCAGGGCCTTTGGTCTATAAGGGATGATGTGCAAATTCCATCTTCACCATACTTCCCCACTTATGCGCAAGGGCAAGGTCCTCCCCCGATGGTGCAGGAACGC
TTCCACAGTGTTATAAGCCAGCTTTTCCAATATAGAATTATTCGTTGTGGTGGAGCGGTTGATGATGATATGGCAAATATCATTGTTGCTCAACTTCTATACCTTGATGC
TGTTGATCCCAATAAGGATATCGTCATGTATGTAAATTCCCCTGGTGGATCAGTTACAGCTGGTATGGCCATTTTTGACACTATGAGGCATATTCGACCTGATGTCTCTA
CTGTCTGCGTAGGACTAGCAGCCAGTATGGGCGCCTTCCTGCTTAGTGCTGGAACTAAAGGAAAAAGATACAGCTTGCCAAATTCAAGGATAATGATCCATCAGCCTCTT
GGTGGTGCTCAAGGTGGACAAACTGACATTGATATTCAGGCAAATGAAATGTTGCATCATAAGGCAAATCTTAATGGGTATCTTTCCTACCACACCGGTCAAAGTCTCGA
GAAGATTAACCAGGATACAGATCGTGATTTCTTCATGAGTGCCAAAGAAGCCAAAGAATATGGACTCATAGATGGAGTTATCATGAATCCTCTCAAAGCCCTCCAACCTT
TAGCAGCTGCAGCTGCCACAGAAGCCGAGCCGGGTGCG
mRNA sequenceShow/hide mRNA sequence
ATGGCTCATACTTTCGCCTACACGTCTGCCTCGTCTTTCAGATTAAACTCCCTCGTTTCTGTTCCCAATTCTAGCTCTTCTTCCGAGTCCCAGAAGCTCTTTCTCCCCCT
GGACCCTTTTCAGTCGAGGAAACTAGGAAAATTAGTTGGAGGTGGAAGAAACCTCAAGAATACTCCAGTCAAAGCCATCTACTCAGGCGAGTTTTCATCTCTGGATAGGA
GTTCTCGCCAGGGCCTTTGGTCTATAAGGGATGATGTGCAAATTCCATCTTCACCATACTTCCCCACTTATGCGCAAGGGCAAGGTCCTCCCCCGATGGTGCAGGAACGC
TTCCACAGTGTTATAAGCCAGCTTTTCCAATATAGAATTATTCGTTGTGGTGGAGCGGTTGATGATGATATGGCAAATATCATTGTTGCTCAACTTCTATACCTTGATGC
TGTTGATCCCAATAAGGATATCGTCATGTATGTAAATTCCCCTGGTGGATCAGTTACAGCTGGTATGGCCATTTTTGACACTATGAGGCATATTCGACCTGATGTCTCTA
CTGTCTGCGTAGGACTAGCAGCCAGTATGGGCGCCTTCCTGCTTAGTGCTGGAACTAAAGGAAAAAGATACAGCTTGCCAAATTCAAGGATAATGATCCATCAGCCTCTT
GGTGGTGCTCAAGGTGGACAAACTGACATTGATATTCAGGCAAATGAAATGTTGCATCATAAGGCAAATCTTAATGGGTATCTTTCCTACCACACCGGTCAAAGTCTCGA
GAAGATTAACCAGGATACAGATCGTGATTTCTTCATGAGTGCCAAAGAAGCCAAAGAATATGGACTCATAGATGGAGTTATCATGAATCCTCTCAAAGCCCTCCAACCTT
TAGCAGCTGCAGCTGCCACAGAAGCCGAGCCGGGTGCG
Protein sequenceShow/hide protein sequence
MAHTFAYTSASSFRLNSLVSVPNSSSSSESQKLFLPLDPFQSRKLGKLVGGGRNLKNTPVKAIYSGEFSSLDRSSRQGLWSIRDDVQIPSSPYFPTYAQGQGPPPMVQER
FHSVISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPL
GGAQGGQTDIDIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAAAATEAEPGA