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MS018984 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018984
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein TIC 214
Genome locationscaffold20:476198..476467
RNA-Seq ExpressionMS018984
SyntenyMS018984
Gene Ontology termsGO:0015031 - protein transport (biological process)
GO:0009706 - chloroplast inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008896 - Protein TIC214


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QJS52310.1 hypothetical protein RF1 [Indofevillea khasiana]1.5e-2677.27Show/hide
Query:  SQTIGISLVHQNKYQINQRYQEKRYPRKKIFAETLQYIKKTN-NRVSNHYDLLVLKNLPYSPRGRREFKILICLNSRNRKDIHRNTAF
        SQTIGISLVH+NKYQINQRYQEK YP KK FAE++   +KTN NR SNHYDLLV +N+  SPRGRREF+ILIC NSRNR DIHRNTAF
Subjt:  SQTIGISLVHQNKYQINQRYQEKRYPRKKIFAETLQYIKKTN-NRVSNHYDLLVLKNLPYSPRGRREFKILICLNSRNRKDIHRNTAF

YP_009738261.1 Ycf1 [Siraitia siamensis]1.5e-2677.27Show/hide
Query:  SQTIGISLVHQNKYQINQRYQEKRYPRKKIFAETLQYIKKTN-NRVSNHYDLLVLKNLPYSPRGRREFKILICLNSRNRKDIHRNTAF
        SQTIGISLVH+NKYQINQRYQEK YP KK FAE++   +KTN NR SNHYDLLV +N+  SPRGRREF+ILIC NSRNR DIHRNTAF
Subjt:  SQTIGISLVHQNKYQINQRYQEKRYPRKKIFAETLQYIKKTN-NRVSNHYDLLVLKNLPYSPRGRREFKILICLNSRNRKDIHRNTAF

YP_009751879.1 Ycf1 protein [Indofevillea khasiana]1.5e-2677.27Show/hide
Query:  SQTIGISLVHQNKYQINQRYQEKRYPRKKIFAETLQYIKKTN-NRVSNHYDLLVLKNLPYSPRGRREFKILICLNSRNRKDIHRNTAF
        SQTIGISLVH+NKYQINQRYQEK YP KK FAE++   +KTN NR SNHYDLLV +N+  SPRGRREF+ILIC NSRNR DIHRNTAF
Subjt:  SQTIGISLVHQNKYQINQRYQEKRYPRKKIFAETLQYIKKTN-NRVSNHYDLLVLKNLPYSPRGRREFKILICLNSRNRKDIHRNTAF

YP_009752977.1 Ycf1 protein [Momordica sessilifolia]1.5e-2677.27Show/hide
Query:  SQTIGISLVHQNKYQINQRYQEKRYPRKKIFAETLQYIKKTN-NRVSNHYDLLVLKNLPYSPRGRREFKILICLNSRNRKDIHRNTAF
        SQTIGISLVH+NKYQINQRYQEK YP KK FAE++   +KTN NR SNHYDLLV +N+  SPRGRREF+ILIC NSRNR DIHRNTAF
Subjt:  SQTIGISLVHQNKYQINQRYQEKRYPRKKIFAETLQYIKKTN-NRVSNHYDLLVLKNLPYSPRGRREFKILICLNSRNRKDIHRNTAF

YP_009753666.1 Ycf1 protein [Trichosanthes wallichiana]1.5e-2677.27Show/hide
Query:  SQTIGISLVHQNKYQINQRYQEKRYPRKKIFAETLQYIKKTN-NRVSNHYDLLVLKNLPYSPRGRREFKILICLNSRNRKDIHRNTAF
        SQTIGISLVH+NKYQINQRYQEK YP KK FAE++   +KTN NR SNHYDLLV +N+  SPRGRREF+ILIC NSRNR DIHRNTAF
Subjt:  SQTIGISLVHQNKYQINQRYQEKRYPRKKIFAETLQYIKKTN-NRVSNHYDLLVLKNLPYSPRGRREFKILICLNSRNRKDIHRNTAF

TrEMBL top hitse value%identityAlignment
A0A515BLT2 Protein TIC 2147.3e-2777.27Show/hide
Query:  SQTIGISLVHQNKYQINQRYQEKRYPRKKIFAETLQYIKKTN-NRVSNHYDLLVLKNLPYSPRGRREFKILICLNSRNRKDIHRNTAF
        SQTIGISLVH+NKYQINQRYQEK YP KK FAE++   +KTN NR SNHYDLLV +N+  SPRGRREF+ILIC NSRNR DIHRNTAF
Subjt:  SQTIGISLVHQNKYQINQRYQEKRYPRKKIFAETLQYIKKTN-NRVSNHYDLLVLKNLPYSPRGRREFKILICLNSRNRKDIHRNTAF

A0A6C0U995 Protein TIC 2147.3e-2777.27Show/hide
Query:  SQTIGISLVHQNKYQINQRYQEKRYPRKKIFAETLQYIKKTN-NRVSNHYDLLVLKNLPYSPRGRREFKILICLNSRNRKDIHRNTAF
        SQTIGISLVH+NKYQINQRYQEK YP KK FAE++   +KTN NR SNHYDLLV +N+  SPRGRREF+ILIC NSRNR DIHRNTAF
Subjt:  SQTIGISLVHQNKYQINQRYQEKRYPRKKIFAETLQYIKKTN-NRVSNHYDLLVLKNLPYSPRGRREFKILICLNSRNRKDIHRNTAF

A0A6H0EQJ7 Protein TIC 2147.3e-2777.27Show/hide
Query:  SQTIGISLVHQNKYQINQRYQEKRYPRKKIFAETLQYIKKTN-NRVSNHYDLLVLKNLPYSPRGRREFKILICLNSRNRKDIHRNTAF
        SQTIGISLVH+NKYQINQRYQEK YP KK FAE++   +KTN NR SNHYDLLV +N+  SPRGRREF+ILIC NSRNR DIHRNTAF
Subjt:  SQTIGISLVHQNKYQINQRYQEKRYPRKKIFAETLQYIKKTN-NRVSNHYDLLVLKNLPYSPRGRREFKILICLNSRNRKDIHRNTAF

A0A6H0ESM5 Protein TIC 2147.3e-2777.27Show/hide
Query:  SQTIGISLVHQNKYQINQRYQEKRYPRKKIFAETLQYIKKTN-NRVSNHYDLLVLKNLPYSPRGRREFKILICLNSRNRKDIHRNTAF
        SQTIGISLVH+NKYQINQRYQEK YP KK FAE++   +KTN NR SNHYDLLV +N+  SPRGRREF+ILIC NSRNR DIHRNTAF
Subjt:  SQTIGISLVHQNKYQINQRYQEKRYPRKKIFAETLQYIKKTN-NRVSNHYDLLVLKNLPYSPRGRREFKILICLNSRNRKDIHRNTAF

A0A6M4SS32 Protein TIC 2147.3e-2777.27Show/hide
Query:  SQTIGISLVHQNKYQINQRYQEKRYPRKKIFAETLQYIKKTN-NRVSNHYDLLVLKNLPYSPRGRREFKILICLNSRNRKDIHRNTAF
        SQTIGISLVH+NKYQINQRYQEK YP KK FAE++   +KTN NR SNHYDLLV +N+  SPRGRREF+ILIC NSRNR DIHRNTAF
Subjt:  SQTIGISLVHQNKYQINQRYQEKRYPRKKIFAETLQYIKKTN-NRVSNHYDLLVLKNLPYSPRGRREFKILICLNSRNRKDIHRNTAF

SwissProt top hitse value%identityAlignment
A0ZZ93 Protein TIC 2143.6e-1552.87Show/hide
Query:  QTIGISLVHQNKYQINQRYQEKRYPRKKIFAETL-QYIKKTNNRVSNHYDLLVLKNLPYSPRGRREFKILICLNSRNRKDIHRNTAF
        QTI I LVH+NK+QINQRYQEK Y  K  F E + ++ K T N+  NHYDL V +N+  SP  RRE +I I  NSR++  +HRN  F
Subjt:  QTIGISLVHQNKYQINQRYQEKRYPRKKIFAETL-QYIKKTNNRVSNHYDLLVLKNLPYSPRGRREFKILICLNSRNRKDIHRNTAF

Q0ZIW0 Protein TIC 2141.2e-1554.02Show/hide
Query:  QTIGISLVHQNKYQINQRYQEKRY-PRKKIFAETLQYIKKTNNRVSNHYDLLVLKNLPYSPRGRREFKILICLNSRNRKDIHRNTAF
        QTIGISLVH++KYQ NQRY+E+RY   K     + +  K   N+  NHYDLLV +N+  SPR RR+F+ILIC N RNR  + RN  F
Subjt:  QTIGISLVHQNKYQINQRYQEKRY-PRKKIFAETLQYIKKTNNRVSNHYDLLVLKNLPYSPRGRREFKILICLNSRNRKDIHRNTAF

Q2L951 Protein TIC 2143.6e-1552.87Show/hide
Query:  QTIGISLVHQNKYQINQRYQEKRYPRKKIFAETL-QYIKKTNNRVSNHYDLLVLKNLPYSPRGRREFKILICLNSRNRKDIHRNTAF
        QTI I LVH+NK+QINQRYQEK Y  K  F E + ++ K T N+  NHYDL V +N+  SP  RRE +I I  NSR++  +HRN  F
Subjt:  QTIGISLVHQNKYQINQRYQEKRYPRKKIFAETL-QYIKKTNNRVSNHYDLLVLKNLPYSPRGRREFKILICLNSRNRKDIHRNTAF

Q4VZL0 Protein TIC 2141.6e-2670.45Show/hide
Query:  SQTIGISLVHQNKYQINQRYQEKRYPRKKIFAETLQ-YIKKTNNRVSNHYDLLVLKNLPYSPRGRREFKILICLNSRNRKDIHRNTAF
        SQTIGISLV +NKYQ+NQRYQEK YP K+ FAE++  + K+T NR SNHYDLLV +N+  SPRGRREF+ILIC NS N+ DIHRNTAF
Subjt:  SQTIGISLVHQNKYQINQRYQEKRYPRKKIFAETLQ-YIKKTNNRVSNHYDLLVLKNLPYSPRGRREFKILICLNSRNRKDIHRNTAF

Q68RU8 Protein TIC 2145.6e-1655.17Show/hide
Query:  QTIGISLVHQNKYQINQRYQEKRYPRKKIFAE-TLQYIKKTNNRVSNHYDLLVLKNLPYSPRGRREFKILICLNSRNRKDIHRNTAF
        QTIGISL+H++KYQ NQRY+E+RY  KK F E T +Y ++T NR  NHYD LV + +  S R RRE +ILI  NSR+RK +  N  F
Subjt:  QTIGISLVHQNKYQINQRYQEKRYPRKKIFAE-TLQYIKKTNNRVSNHYDLLVLKNLPYSPRGRREFKILICLNSRNRKDIHRNTAF

Arabidopsis top hitse value%identityAlignment
ATCG01130.1 Ycf1 protein1.2e-1344.83Show/hide
Query:  QTIGISLVHQNKYQINQRYQEKRYPRKKIFAETL-QYIKKTNNRVSNHYDLLVLKNLPYSPRGRREFKILICLNSRNRKDIHRNTAF
        +TIGISLVH+NK++I++RY++K Y  KK F +++ +Y  KT N+  N+YD  V + +  SP+ RREF+ILIC N + +     N+ F
Subjt:  QTIGISLVHQNKYQINQRYQEKRYPRKKIFAETL-QYIKKTNNRVSNHYDLLVLKNLPYSPRGRREFKILICLNSRNRKDIHRNTAF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CAAAGTCAAACCATAGGCATTTCATTGGTTCATCAGAATAAGTACCAAATTAATCAAAGATATCAAGAAAAACGCTATCCTCGTAAGAAGATTTTTGCTGAAACATTGCA
ATACATAAAAAAAACAAATAATAGAGTCAGCAATCATTATGATTTGCTTGTTCTAAAAAATCTCCCCTACTCCCCTAGAGGTCGTAGAGAGTTCAAAATTTTAATTTGTT
TAAATTCTCGGAATAGAAAAGATATCCATAGAAATACAGCATTT
mRNA sequenceShow/hide mRNA sequence
CAAAGTCAAACCATAGGCATTTCATTGGTTCATCAGAATAAGTACCAAATTAATCAAAGATATCAAGAAAAACGCTATCCTCGTAAGAAGATTTTTGCTGAAACATTGCA
ATACATAAAAAAAACAAATAATAGAGTCAGCAATCATTATGATTTGCTTGTTCTAAAAAATCTCCCCTACTCCCCTAGAGGTCGTAGAGAGTTCAAAATTTTAATTTGTT
TAAATTCTCGGAATAGAAAAGATATCCATAGAAATACAGCATTT
Protein sequenceShow/hide protein sequence
QSQTIGISLVHQNKYQINQRYQEKRYPRKKIFAETLQYIKKTNNRVSNHYDLLVLKNLPYSPRGRREFKILICLNSRNRKDIHRNTAF