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MS018988 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018988
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptioncytochrome c oxidase subunit 5C-like
Genome locationscaffold20:505352..505543
RNA-Seq ExpressionMS018988
SyntenyMS018988
Gene Ontology termsGO:0005746 - mitochondrial respirasome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008432 - Cytochrome c oxidase subunit 5c


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7025590.1 Cytochrome c oxidase subunit 5C, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-1870.97Show/hide
Query:  AGKIVHATLKGPSIVKEICAASALALFAGSFWKIHQWNEQKRVKSFYDLLEKGEIAVIAQEE
        AGK+ H TLKGPS+VKEI  A  +ALFAGSFWK+HQWNEQ++V++FYDLLEKGEI V+ QE+
Subjt:  AGKIVHATLKGPSIVKEICAASALALFAGSFWKIHQWNEQKRVKSFYDLLEKGEIAVIAQEE

PON72390.1 Cytochrome c oxidase subunit 5c [Trema orientale]3.8e-1973.44Show/hide
Query:  MAG-KIVHATLKGPSIVKEICAASALALFAGSFWKIHQWNEQKRVKSFYDLLEKGEIAVIAQEE
        MAG KI HATLKGPS+VKE+C  +ALALFAGSFWK+H WNEQ++V++FYDLLEKGEI V+ +EE
Subjt:  MAG-KIVHATLKGPSIVKEICAASALALFAGSFWKIHQWNEQKRVKSFYDLLEKGEIAVIAQEE

XP_015968791.2 cytochrome c oxidase subunit 5C [Arachis duranensis]1.9e-1873.85Show/hide
Query:  EMAG-KIVHATLKGPSIVKEICAASALALFAGSFWKIHQWNEQKRVKSFYDLLEKGEIAVIAQEE
        EMAG +I HATLKGPS+VKEIC A+ L L AGS WK+H WNEQ++V++FYDLLEKGEI+VIAQEE
Subjt:  EMAG-KIVHATLKGPSIVKEICAASALALFAGSFWKIHQWNEQKRVKSFYDLLEKGEIAVIAQEE

XP_016207559.2 cytochrome c oxidase subunit 5C [Arachis ipaensis]1.9e-1873.85Show/hide
Query:  EMAG-KIVHATLKGPSIVKEICAASALALFAGSFWKIHQWNEQKRVKSFYDLLEKGEIAVIAQEE
        EMAG +I HATLKGPS+VKEIC A+ L L AGS WK+H WNEQ++V++FYDLLEKGEI+VIAQEE
Subjt:  EMAG-KIVHATLKGPSIVKEICAASALALFAGSFWKIHQWNEQKRVKSFYDLLEKGEIAVIAQEE

XP_022155327.1 cytochrome c oxidase subunit 5C-like [Momordica charantia]1.9e-26100Show/hide
Query:  MAGKIVHATLKGPSIVKEICAASALALFAGSFWKIHQWNEQKRVKSFYDLLEKGEIAVIAQEE
        MAGKIVHATLKGPSIVKEICAASALALFAGSFWKIHQWNEQKRVKSFYDLLEKGEIAVIAQEE
Subjt:  MAGKIVHATLKGPSIVKEICAASALALFAGSFWKIHQWNEQKRVKSFYDLLEKGEIAVIAQEE

TrEMBL top hitse value%identityAlignment
A0A2P5CKY2 Cytochrome c oxidase subunit 5c9.1e-1971.88Show/hide
Query:  MAG-KIVHATLKGPSIVKEICAASALALFAGSFWKIHQWNEQKRVKSFYDLLEKGEIAVIAQEE
        MAG KI HATLKGPS+VKE+C  +ALALFAGS WK+H WNEQ++V++FYDLLEKGEI V+ +EE
Subjt:  MAG-KIVHATLKGPSIVKEICAASALALFAGSFWKIHQWNEQKRVKSFYDLLEKGEIAVIAQEE

A0A2P5DGG9 Cytochrome c oxidase subunit 5c1.8e-1973.44Show/hide
Query:  MAG-KIVHATLKGPSIVKEICAASALALFAGSFWKIHQWNEQKRVKSFYDLLEKGEIAVIAQEE
        MAG KI HATLKGPS+VKE+C  +ALALFAGSFWK+H WNEQ++V++FYDLLEKGEI V+ +EE
Subjt:  MAG-KIVHATLKGPSIVKEICAASALALFAGSFWKIHQWNEQKRVKSFYDLLEKGEIAVIAQEE

A0A444YIS0 Uncharacterized protein9.1e-1973.85Show/hide
Query:  EMAG-KIVHATLKGPSIVKEICAASALALFAGSFWKIHQWNEQKRVKSFYDLLEKGEIAVIAQEE
        EMAG +I HATLKGPS+VKEIC A+ L L AGS WK+H WNEQ++V++FYDLLEKGEI+VIAQEE
Subjt:  EMAG-KIVHATLKGPSIVKEICAASALALFAGSFWKIHQWNEQKRVKSFYDLLEKGEIAVIAQEE

A0A445CMQ1 Uncharacterized protein9.1e-1973.85Show/hide
Query:  EMAG-KIVHATLKGPSIVKEICAASALALFAGSFWKIHQWNEQKRVKSFYDLLEKGEIAVIAQEE
        EMAG +I HATLKGPS+VKEIC A+ L L AGS WK+H WNEQ++V++FYDLLEKGEI+VIAQEE
Subjt:  EMAG-KIVHATLKGPSIVKEICAASALALFAGSFWKIHQWNEQKRVKSFYDLLEKGEIAVIAQEE

A0A6J1DP17 cytochrome c oxidase subunit 5C-like9.1e-27100Show/hide
Query:  MAGKIVHATLKGPSIVKEICAASALALFAGSFWKIHQWNEQKRVKSFYDLLEKGEIAVIAQEE
        MAGKIVHATLKGPSIVKEICAASALALFAGSFWKIHQWNEQKRVKSFYDLLEKGEIAVIAQEE
Subjt:  MAGKIVHATLKGPSIVKEICAASALALFAGSFWKIHQWNEQKRVKSFYDLLEKGEIAVIAQEE

SwissProt top hitse value%identityAlignment
O22912 Probable cytochrome c oxidase subunit 5C-13.7e-1762.5Show/hide
Query:  MAG-KIVHATLKGPSIVKEICAASALALFAGSFWKIHQWNEQKRVKSFYDLLEKGEIAVIAQEE
        MAG K+ HATLKGPS+VKE+    AL L AG  WK+H WNEQ++ ++FYDLLE+GEI+V+A EE
Subjt:  MAG-KIVHATLKGPSIVKEICAASALALFAGSFWKIHQWNEQKRVKSFYDLLEKGEIAVIAQEE

Q42841 Cytochrome c oxidase subunit 5C1.8e-1658.33Show/hide
Query:  GKIVHATLKGPSIVKEICAASALALFAGSFWKIHQWNEQKRVKSFYDLLEKGEIAVIAQE
        G++ HATLKGPS+VKEI     L L AG  WK+H WNEQ++ +SFYD+LEKG+I+V+ +E
Subjt:  GKIVHATLKGPSIVKEICAASALALFAGSFWKIHQWNEQKRVKSFYDLLEKGEIAVIAQE

Q8VY39 Cytochrome c oxidase subunit 5C-25.3e-1655.74Show/hide
Query:  GKIVHATLKGPSIVKEICAASALALFAGSFWKIHQWNEQKRVKSFYDLLEKGEIAVIAQEE
        G++ H  LKGPS+VKE+   + L L AG  WK+H WNEQ++ ++FYDLLEKGEI+V+  EE
Subjt:  GKIVHATLKGPSIVKEICAASALALFAGSFWKIHQWNEQKRVKSFYDLLEKGEIAVIAQEE

Q9LZQ0 Cytochrome c oxidase subunit 5C-28.2e-1760.94Show/hide
Query:  MAG-KIVHATLKGPSIVKEICAASALALFAGSFWKIHQWNEQKRVKSFYDLLEKGEIAVIAQEE
        MAG K+ HATLKGPS+VKE+     L L AG  WK+H WNEQ++ ++FYDLLE+GEI V+A EE
Subjt:  MAG-KIVHATLKGPSIVKEICAASALALFAGSFWKIHQWNEQKRVKSFYDLLEKGEIAVIAQEE

Q9SXX7 Cytochrome c oxidase subunit 5C7.4e-1861.67Show/hide
Query:  GKIVHATLKGPSIVKEICAASALALFAGSFWKIHQWNEQKRVKSFYDLLEKGEIAVIAQE
        G+I HATLKGPS+VKEIC    L L AG  WK+H WNEQ++ +SFYD+LEKG+I+V+ +E
Subjt:  GKIVHATLKGPSIVKEICAASALALFAGSFWKIHQWNEQKRVKSFYDLLEKGEIAVIAQE

Arabidopsis top hitse value%identityAlignment
AT2G47380.1 Cytochrome c oxidase subunit Vc family protein2.6e-1862.5Show/hide
Query:  MAG-KIVHATLKGPSIVKEICAASALALFAGSFWKIHQWNEQKRVKSFYDLLEKGEIAVIAQEE
        MAG K+ HATLKGPS+VKE+    AL L AG  WK+H WNEQ++ ++FYDLLE+GEI+V+A EE
Subjt:  MAG-KIVHATLKGPSIVKEICAASALALFAGSFWKIHQWNEQKRVKSFYDLLEKGEIAVIAQEE

AT5G61310.1 Cytochrome c oxidase subunit Vc family protein3.8e-1760.94Show/hide
Query:  MAG-KIVHATLKGPSIVKEICAASALALFAGSFWKIHQWNEQKRVKSFYDLLEKGEIAVIAQEE
        MAG KI HATLKGPS+VKE+     L L AG  WK+H WNEQ++ + FYDLLE+GEI V+  EE
Subjt:  MAG-KIVHATLKGPSIVKEICAASALALFAGSFWKIHQWNEQKRVKSFYDLLEKGEIAVIAQEE

AT5G61310.2 Cytochrome c oxidase subunit Vc family protein3.8e-1760.94Show/hide
Query:  MAG-KIVHATLKGPSIVKEICAASALALFAGSFWKIHQWNEQKRVKSFYDLLEKGEIAVIAQEE
        MAG KI HATLKGPS+VKE+     L L AG  WK+H WNEQ++ + FYDLLE+GEI V+  EE
Subjt:  MAG-KIVHATLKGPSIVKEICAASALALFAGSFWKIHQWNEQKRVKSFYDLLEKGEIAVIAQEE

AT5G61310.3 Cytochrome c oxidase subunit Vc family protein3.8e-1760.94Show/hide
Query:  MAG-KIVHATLKGPSIVKEICAASALALFAGSFWKIHQWNEQKRVKSFYDLLEKGEIAVIAQEE
        MAG KI HATLKGPS+VKE+     L L AG  WK+H WNEQ++ + FYDLLE+GEI V+  EE
Subjt:  MAG-KIVHATLKGPSIVKEICAASALALFAGSFWKIHQWNEQKRVKSFYDLLEKGEIAVIAQEE

AT5G61310.4 Cytochrome c oxidase subunit Vc family protein3.8e-1760.94Show/hide
Query:  MAG-KIVHATLKGPSIVKEICAASALALFAGSFWKIHQWNEQKRVKSFYDLLEKGEIAVIAQEE
        MAG KI HATLKGPS+VKE+     L L AG  WK+H WNEQ++ + FYDLLE+GEI V+  EE
Subjt:  MAG-KIVHATLKGPSIVKEICAASALALFAGSFWKIHQWNEQKRVKSFYDLLEKGEIAVIAQEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAAATGGCTGGAAAAATTGTTCACGCCACCCTGAAAGGACCTAGCATTGTTAAGGAGATATGTGCGGCATCAGCTCTTGCTCTGTTTGCTGGTAGCTTCTGGAAAATTCA
TCAGTGGAATGAACAGAAGAGAGTAAAATCCTTCTATGACTTGCTGGAGAAAGGCGAAATTGCTGTTATCGCGCAGGAAGAG
mRNA sequenceShow/hide mRNA sequence
GAAATGGCTGGAAAAATTGTTCACGCCACCCTGAAAGGACCTAGCATTGTTAAGGAGATATGTGCGGCATCAGCTCTTGCTCTGTTTGCTGGTAGCTTCTGGAAAATTCA
TCAGTGGAATGAACAGAAGAGAGTAAAATCCTTCTATGACTTGCTGGAGAAAGGCGAAATTGCTGTTATCGCGCAGGAAGAG
Protein sequenceShow/hide protein sequence
EMAGKIVHATLKGPSIVKEICAASALALFAGSFWKIHQWNEQKRVKSFYDLLEKGEIAVIAQEE