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MS018994 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018994
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionVacuolar protein sorting-associated protein 51 homolog
Genome locationscaffold20:529891..530100
RNA-Seq ExpressionMS018994
SyntenyMS018994
Gene Ontology termsGO:0006869 - lipid transport (biological process)
GO:0007030 - Golgi organization (biological process)
GO:0015031 - protein transport (biological process)
GO:0032456 - endocytic recycling (biological process)
GO:0042147 - retrograde transport, endosome to Golgi (biological process)
GO:0000938 - GARP complex (cellular component)
GO:0005829 - cytosol (cellular component)
InterPro domainsIPR014812 - Vacuolar protein sorting-associated protein 51


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606940.1 Vacuolar protein sorting-associated protein 51-like protein, partial [Cucurbita argyrosperma subsp. sororia]4.7e-2390.77Show/hide
Query:  MEIDDVPMDEKAKRMRDLLSSFYSPDASMSGSPTGSSNRYASPLDAINTTSFNPDQYMSILVHQA
        MEI+DVPMDEKAKRMRDLLSSFYSPDASMSGS TGSSNRYASPL+ INTTSFNPDQYMSILV +A
Subjt:  MEIDDVPMDEKAKRMRDLLSSFYSPDASMSGSPTGSSNRYASPLDAINTTSFNPDQYMSILVHQA
XP_004139639.1 vacuolar protein sorting-associated protein 51 homolog [Cucumis sativus]9.5e-2490.77Show/hide
Query:  MEIDDVPMDEKAKRMRDLLSSFYSPDASMSGSPTGSSNRYASPLDAINTTSFNPDQYMSILVHQA
        MEI+DVPMDEKAKRMRDLLSSFYSPDASMSGSPTGSSNRYASPL+AINTTSFNPDQYM+ILV ++
Subjt:  MEIDDVPMDEKAKRMRDLLSSFYSPDASMSGSPTGSSNRYASPLDAINTTSFNPDQYMSILVHQA
XP_008461504.1 PREDICTED: vacuolar protein sorting-associated protein 51 homolog [Cucumis melo]1.6e-2390.77Show/hide
Query:  MEIDDVPMDEKAKRMRDLLSSFYSPDASMSGSPTGSSNRYASPLDAINTTSFNPDQYMSILVHQA
        MEIDDVPMDEKAKRMRDLLSSFYSPDASMS SPTGSSNRYASPL+AINTTSFNPDQYM+ILV ++
Subjt:  MEIDDVPMDEKAKRMRDLLSSFYSPDASMSGSPTGSSNRYASPLDAINTTSFNPDQYMSILVHQA
XP_022155269.1 vacuolar protein sorting-associated protein 51 homolog [Momordica charantia]5.0e-2595.38Show/hide
Query:  MEIDDVPMDEKAKRMRDLLSSFYSPDASMSGSPTGSSNRYASPLDAINTTSFNPDQYMSILVHQA
        MEIDDVPMDEKAKRMRDLLSSFYSPDASMSGSPTGSSNRYASPLDAINTTSFNPDQYMSILV ++
Subjt:  MEIDDVPMDEKAKRMRDLLSSFYSPDASMSGSPTGSSNRYASPLDAINTTSFNPDQYMSILVHQA
XP_022949182.1 vacuolar protein sorting-associated protein 51 homolog [Cucurbita moschata]4.7e-2390.77Show/hide
Query:  MEIDDVPMDEKAKRMRDLLSSFYSPDASMSGSPTGSSNRYASPLDAINTTSFNPDQYMSILVHQA
        MEI+DVPMDEKAKRMRDLLSSFYSPDASMSGS TGSSNRYASPL+ INTTSFNPDQYMSILV +A
Subjt:  MEIDDVPMDEKAKRMRDLLSSFYSPDASMSGSPTGSSNRYASPLDAINTTSFNPDQYMSILVHQA
TrEMBL top hitse value%identityAlignment
A0A0A0K869 Vacuolar protein sorting-associated protein 51 homolog4.6e-2490.77Show/hide
Query:  MEIDDVPMDEKAKRMRDLLSSFYSPDASMSGSPTGSSNRYASPLDAINTTSFNPDQYMSILVHQA
        MEI+DVPMDEKAKRMRDLLSSFYSPDASMSGSPTGSSNRYASPL+AINTTSFNPDQYM+ILV ++
Subjt:  MEIDDVPMDEKAKRMRDLLSSFYSPDASMSGSPTGSSNRYASPLDAINTTSFNPDQYMSILVHQA
A0A1S3CES5 Vacuolar protein sorting-associated protein 51 homolog7.9e-2490.77Show/hide
Query:  MEIDDVPMDEKAKRMRDLLSSFYSPDASMSGSPTGSSNRYASPLDAINTTSFNPDQYMSILVHQA
        MEIDDVPMDEKAKRMRDLLSSFYSPDASMS SPTGSSNRYASPL+AINTTSFNPDQYM+ILV ++
Subjt:  MEIDDVPMDEKAKRMRDLLSSFYSPDASMSGSPTGSSNRYASPLDAINTTSFNPDQYMSILVHQA
A0A6J1DPR9 Vacuolar protein sorting-associated protein 51 homolog2.4e-2595.38Show/hide
Query:  MEIDDVPMDEKAKRMRDLLSSFYSPDASMSGSPTGSSNRYASPLDAINTTSFNPDQYMSILVHQA
        MEIDDVPMDEKAKRMRDLLSSFYSPDASMSGSPTGSSNRYASPLDAINTTSFNPDQYMSILV ++
Subjt:  MEIDDVPMDEKAKRMRDLLSSFYSPDASMSGSPTGSSNRYASPLDAINTTSFNPDQYMSILVHQA
A0A6J1GBC0 Vacuolar protein sorting-associated protein 51 homolog2.3e-2390.77Show/hide
Query:  MEIDDVPMDEKAKRMRDLLSSFYSPDASMSGSPTGSSNRYASPLDAINTTSFNPDQYMSILVHQA
        MEI+DVPMDEKAKRMRDLLSSFYSPDASMSGS TGSSNRYASPL+ INTTSFNPDQYMSILV +A
Subjt:  MEIDDVPMDEKAKRMRDLLSSFYSPDASMSGSPTGSSNRYASPLDAINTTSFNPDQYMSILVHQA
A0A6J1K9H7 Vacuolar protein sorting-associated protein 51 homolog2.3e-2390.77Show/hide
Query:  MEIDDVPMDEKAKRMRDLLSSFYSPDASMSGSPTGSSNRYASPLDAINTTSFNPDQYMSILVHQA
        MEI+DVPMDEKAKRMRDLLSSFYSPDASMSGS TGSSNRYASPL+ INTTSFNPDQYMSILV +A
Subjt:  MEIDDVPMDEKAKRMRDLLSSFYSPDASMSGSPTGSSNRYASPLDAINTTSFNPDQYMSILVHQA
SwissProt top hitse value%identityAlignment
Q0WQ75 Vacuolar protein sorting-associated protein 51 homolog1.1e-0955.38Show/hide
Query:  MEIDDVPMDEKAKRMRDLLSSFYSPDASMSGSPTGSSNRYASPLDAINTTSFNPDQYMSILVHQA
        M  +  PMDEKAKRMRDLLSSFY+PD S+S S  GSS    +  D IN+TSF+ DQYM +++ ++
Subjt:  MEIDDVPMDEKAKRMRDLLSSFYSPDASMSGSPTGSSNRYASPLDAINTTSFNPDQYMSILVHQA
Arabidopsis top hitse value%identityAlignment
AT4G02030.1 Vps51/Vps67 family (components of vesicular transport) protein7.5e-1155.38Show/hide
Query:  MEIDDVPMDEKAKRMRDLLSSFYSPDASMSGSPTGSSNRYASPLDAINTTSFNPDQYMSILVHQA
        M  +  PMDEKAKRMRDLLSSFY+PD S+S S  GSS    +  D IN+TSF+ DQYM +++ ++
Subjt:  MEIDDVPMDEKAKRMRDLLSSFYSPDASMSGSPTGSSNRYASPLDAINTTSFNPDQYMSILVHQA
AT4G02030.2 Vps51/Vps67 family (components of vesicular transport) protein1.3e-1058.06Show/hide
Query:  MEIDDVPMDEKAKRMRDLLSSFYSPDASMSGSPTGSSNRYASPLDAINTTSFNPDQYMSILV
        M  +  PMDEKAKRMRDLLSSFY+PD S+S S  GSS    +  D IN+TSF+ DQYM +++
Subjt:  MEIDDVPMDEKAKRMRDLLSSFYSPDASMSGSPTGSSNRYASPLDAINTTSFNPDQYMSILV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATTGATGATGTTCCAATGGATGAAAAAGCTAAGAGGATGAGGGATCTGCTATCTAGCTTCTACTCCCCTGATGCTTCAATGTCTGGCTCACCCACGGGTTCATC
TAATAGATATGCCTCTCCATTAGATGCCATCAACACTACCTCATTTAATCCTGATCAGTATATGAGCATTCTGGTACATCAAGCCCCATCTCATTTTTAT
mRNA sequenceShow/hide mRNA sequence
ATGGAGATTGATGATGTTCCAATGGATGAAAAAGCTAAGAGGATGAGGGATCTGCTATCTAGCTTCTACTCCCCTGATGCTTCAATGTCTGGCTCACCCACGGGTTCATC
TAATAGATATGCCTCTCCATTAGATGCCATCAACACTACCTCATTTAATCCTGATCAGTATATGAGCATTCTGGTACATCAAGCCCCATCTCATTTTTAT
Protein sequenceShow/hide protein sequence
MEIDDVPMDEKAKRMRDLLSSFYSPDASMSGSPTGSSNRYASPLDAINTTSFNPDQYMSILVHQAPSHFY