; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS019006 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019006
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionneuronal acetylcholine receptor subunit alpha-2-like
Genome locationscaffold20:647765..648295
RNA-Seq ExpressionMS019006
SyntenyMS019006
Gene Ontology termsNA
InterPro domainsIPR008480 - Protein of unknown function DUF761, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581289.1 hypothetical protein SDJN03_21291, partial [Cucurbita argyrosperma subsp. sororia]1.0e-1842.46Show/hide
Query:  MSNIRWVAARRAWKMLSNLKIQAPHRRRRPFTMDLRLVRWFIKRLAHPISSIPTPTRPRPHYAAERQFSFQETPKFSRNLHRRPPSAAARLHLPRLPCIN
        MS  +W AARRA K L + KI    R R  F +D R V  FIKRL HP    PTP RP   Y+AERQFSF + P     LHRRPP        P  P   
Subjt:  MSNIRWVAARRAWKMLSNLKIQAPHRRRRPFTMDLRLVRWFIKRLAHPISSIPTPTRPRPHYAAERQFSFQETPKFSRNLHRRPPSAAARLHLPRLPCIN

Query:  PKVVEFDRALERRVVVVDEEEAGGEGRWRLGGGACDYEEEEGDIE--IDLRAEKFISMFYEEMKMQNQISYLPYHEFSD
                                          CDYE EE + E  ID +AEKFI MFYEEM++Q+Q+SYLP   FSD
Subjt:  PKVVEFDRALERRVVVVDEEEAGGEGRWRLGGGACDYEEEEGDIE--IDLRAEKFISMFYEEMKMQNQISYLPYHEFSD

XP_008454304.1 PREDICTED: neuronal acetylcholine receptor subunit alpha-2-like [Cucumis melo]4.1e-2348.82Show/hide
Query:  RRAWKMLSNLKIQAPHRRRRPFTMDLRLVRWFIKRLAHPISSIPTPTRPRPHYAAERQFSFQETPKFSRNLHRRPPSAAA--RLHLPRLPCINPKVVEFD
        R+ WK+L           RR F +D R +R FIKR+ H      TPT P PH+ AERQFSF +TP F    HRRPPSA+A     +PR  CINPK VEF+
Subjt:  RRAWKMLSNLKIQAPHRRRRPFTMDLRLVRWFIKRLAHPISSIPTPTRPRPHYAAERQFSFQETPKFSRNLHRRPPSAAA--RLHLPRLPCINPKVVEFD

Query:  RALERRVVVVDEEEAGGEGRWRLGGGACDYEEEEGDIEIDLRAEKFISMFYEEMKMQNQISYLPYHEFSD
        R  +      +EEE   E            EEEE +  IDL+AEKFI MFYEEMKMQ+Q+SYL + EFSD
Subjt:  RALERRVVVVDEEEAGGEGRWRLGGGACDYEEEEGDIEIDLRAEKFISMFYEEMKMQNQISYLPYHEFSD

XP_011652950.1 uncharacterized protein LOC105435158 [Cucumis sativus]2.3e-2650Show/hide
Query:  SNIRWVAARRAWKMLSNLKIQAPHRRRRPFTMDLRLVRWFIKRLAHPISSIPTPTRPRPHYAAERQFSFQETPKFSRNLH-RRPPSAAARLHL-PRLPCI
        +N R+   R+AWK++  L+    H  RR F +D R +R FIKR+ H     PTPT   PHY AERQFSF +TP F    H RR PSA+A L L PR  CI
Subjt:  SNIRWVAARRAWKMLSNLKIQAPHRRRRPFTMDLRLVRWFIKRLAHPISSIPTPTRPRPHYAAERQFSFQETPKFSRNLH-RRPPSAAARLHL-PRLPCI

Query:  NPKVVEFDR----ALERRVVVVDEEEAGGEGRWRLGGGACDYEEEEGDIEIDLRAEKFISMFYEEMKMQNQISYLPYHEFSD
        NPK VEF+R      ERR    +EEE                EEEE +  IDL+AEKFI MFYEEMKMQ+Q+SYL + EFSD
Subjt:  NPKVVEFDR----ALERRVVVVDEEEAGGEGRWRLGGGACDYEEEEGDIEIDLRAEKFISMFYEEMKMQNQISYLPYHEFSD

XP_022934217.1 uncharacterized protein LOC111441455 [Cucurbita moschata]2.8e-1943.02Show/hide
Query:  MSNIRWVAARRAWKMLSNLKIQAPHRRRRPFTMDLRLVRWFIKRLAHPISSIPTPTRPRPHYAAERQFSFQETPKFSRNLHRRPPSAAARLHLPRLPCIN
        MS  +W AARRA K L + KI    R RR F +D R V  FIKRL HP    PTP RP   Y+AERQFSF + P     LHRRPP        P  P   
Subjt:  MSNIRWVAARRAWKMLSNLKIQAPHRRRRPFTMDLRLVRWFIKRLAHPISSIPTPTRPRPHYAAERQFSFQETPKFSRNLHRRPPSAAARLHLPRLPCIN

Query:  PKVVEFDRALERRVVVVDEEEAGGEGRWRLGGGACDYEEEEGDIE--IDLRAEKFISMFYEEMKMQNQISYLPYHEFSD
                                          CDYE EE + E  ID +AEKFI MFYEEM++Q+Q+SYLP   FSD
Subjt:  PKVVEFDRALERRVVVVDEEEAGGEGRWRLGGGACDYEEEEGDIE--IDLRAEKFISMFYEEMKMQNQISYLPYHEFSD

XP_038906165.1 uncharacterized protein LOC120092045 [Benincasa hispida]7.7e-3857.07Show/hide
Query:  MSNIRWVAARRAWKMLSNLKIQAPHRRRRPFTMDLRLVRWFIKRLAHPISSIPTPTRPRPHYAAERQFSFQETPKFSRNLHRRPPSAAARL-HLPRLPCI
        MSN +  AARR WK+L   K    H  RRPF +D R +R FIKRL H IS+ PTP    PHY  ERQFSF +TP F    HR PPSA+A L H PR  CI
Subjt:  MSNIRWVAARRAWKMLSNLKIQAPHRRRRPFTMDLRLVRWFIKRLAHPISSIPTPTRPRPHYAAERQFSFQETPKFSRNLHRRPPSAAARL-HLPRLPCI

Query:  NPKVVEFDRALERRVVVVDEEEAGGEGRWRLGGGACDYEEEEGDIE------IDLRAEKFISMFYEEMKMQNQISYLPYHEFSD
        NPK VEFD   E RVV   +++ GG  RWRL GG C YEEEE + E      IDL+AEKFI MFYEEMKMQ+Q+SYL   EF D
Subjt:  NPKVVEFDRALERRVVVVDEEEAGGEGRWRLGGGACDYEEEEGDIE------IDLRAEKFISMFYEEMKMQNQISYLPYHEFSD

TrEMBL top hitse value%identityAlignment
A0A0A0KYA9 Uncharacterized protein1.1e-2650Show/hide
Query:  SNIRWVAARRAWKMLSNLKIQAPHRRRRPFTMDLRLVRWFIKRLAHPISSIPTPTRPRPHYAAERQFSFQETPKFSRNLH-RRPPSAAARLHL-PRLPCI
        +N R+   R+AWK++  L+    H  RR F +D R +R FIKR+ H     PTPT   PHY AERQFSF +TP F    H RR PSA+A L L PR  CI
Subjt:  SNIRWVAARRAWKMLSNLKIQAPHRRRRPFTMDLRLVRWFIKRLAHPISSIPTPTRPRPHYAAERQFSFQETPKFSRNLH-RRPPSAAARLHL-PRLPCI

Query:  NPKVVEFDR----ALERRVVVVDEEEAGGEGRWRLGGGACDYEEEEGDIEIDLRAEKFISMFYEEMKMQNQISYLPYHEFSD
        NPK VEF+R      ERR    +EEE                EEEE +  IDL+AEKFI MFYEEMKMQ+Q+SYL + EFSD
Subjt:  NPKVVEFDR----ALERRVVVVDEEEAGGEGRWRLGGGACDYEEEEGDIEIDLRAEKFISMFYEEMKMQNQISYLPYHEFSD

A0A1S3BZI3 neuronal acetylcholine receptor subunit alpha-2-like2.0e-2348.82Show/hide
Query:  RRAWKMLSNLKIQAPHRRRRPFTMDLRLVRWFIKRLAHPISSIPTPTRPRPHYAAERQFSFQETPKFSRNLHRRPPSAAA--RLHLPRLPCINPKVVEFD
        R+ WK+L           RR F +D R +R FIKR+ H      TPT P PH+ AERQFSF +TP F    HRRPPSA+A     +PR  CINPK VEF+
Subjt:  RRAWKMLSNLKIQAPHRRRRPFTMDLRLVRWFIKRLAHPISSIPTPTRPRPHYAAERQFSFQETPKFSRNLHRRPPSAAA--RLHLPRLPCINPKVVEFD

Query:  RALERRVVVVDEEEAGGEGRWRLGGGACDYEEEEGDIEIDLRAEKFISMFYEEMKMQNQISYLPYHEFSD
        R  +      +EEE   E            EEEE +  IDL+AEKFI MFYEEMKMQ+Q+SYL + EFSD
Subjt:  RALERRVVVVDEEEAGGEGRWRLGGGACDYEEEEGDIEIDLRAEKFISMFYEEMKMQNQISYLPYHEFSD

A0A444XGX3 Uncharacterized protein4.9e-1441.32Show/hide
Query:  ARRAWKML--SNLKIQAPHRRRRPFTMDLRLVRWFIKRLAHPISSIPTPTRPRPHYAAERQFSFQETPKFSRNLHRRPPSAAARLHLPRLPCINPKVVEF
        + RAWK+L  S L  +     +R   M+LRLV  ++KRL H  +S  +    + HY  ER+ SF +TP F   ++ RP S+   LHLP +PCINP  V+F
Subjt:  ARRAWKML--SNLKIQAPHRRRRPFTMDLRLVRWFIKRLAHPISSIPTPTRPRPHYAAERQFSFQETPKFSRNLHRRPPSAAARLHLPRLPCINPKVVEF

Query:  DRALERRVVVVDEEEAGGEGRWRLGGGACDYEEEEGDIEIDLRAEKFISMFYEEMKMQNQISYLPYH
        D   E      + +    E  W+  G     E+EEG   ID RAE+FI+ FYE+MK+Q QISYL Y+
Subjt:  DRALERRVVVVDEEEAGGEGRWRLGGGACDYEEEEGDIEIDLRAEKFISMFYEEMKMQNQISYLPYH

A0A5D3E0E5 Neuronal acetylcholine receptor subunit alpha-2-like2.0e-2348.82Show/hide
Query:  RRAWKMLSNLKIQAPHRRRRPFTMDLRLVRWFIKRLAHPISSIPTPTRPRPHYAAERQFSFQETPKFSRNLHRRPPSAAA--RLHLPRLPCINPKVVEFD
        R+ WK+L           RR F +D R +R FIKR+ H      TPT P PH+ AERQFSF +TP F    HRRPPSA+A     +PR  CINPK VEF+
Subjt:  RRAWKMLSNLKIQAPHRRRRPFTMDLRLVRWFIKRLAHPISSIPTPTRPRPHYAAERQFSFQETPKFSRNLHRRPPSAAA--RLHLPRLPCINPKVVEFD

Query:  RALERRVVVVDEEEAGGEGRWRLGGGACDYEEEEGDIEIDLRAEKFISMFYEEMKMQNQISYLPYHEFSD
        R  +      +EEE   E            EEEE +  IDL+AEKFI MFYEEMKMQ+Q+SYL + EFSD
Subjt:  RALERRVVVVDEEEAGGEGRWRLGGGACDYEEEEGDIEIDLRAEKFISMFYEEMKMQNQISYLPYHEFSD

A0A6J1F231 uncharacterized protein LOC1114414551.3e-1943.02Show/hide
Query:  MSNIRWVAARRAWKMLSNLKIQAPHRRRRPFTMDLRLVRWFIKRLAHPISSIPTPTRPRPHYAAERQFSFQETPKFSRNLHRRPPSAAARLHLPRLPCIN
        MS  +W AARRA K L + KI    R RR F +D R V  FIKRL HP    PTP RP   Y+AERQFSF + P     LHRRPP        P  P   
Subjt:  MSNIRWVAARRAWKMLSNLKIQAPHRRRRPFTMDLRLVRWFIKRLAHPISSIPTPTRPRPHYAAERQFSFQETPKFSRNLHRRPPSAAARLHLPRLPCIN

Query:  PKVVEFDRALERRVVVVDEEEAGGEGRWRLGGGACDYEEEEGDIE--IDLRAEKFISMFYEEMKMQNQISYLPYHEFSD
                                          CDYE EE + E  ID +AEKFI MFYEEM++Q+Q+SYLP   FSD
Subjt:  PKVVEFDRALERRVVVVDEEEAGGEGRWRLGGGACDYEEEEGDIE--IDLRAEKFISMFYEEMKMQNQISYLPYHEFSD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G02170.1 unknown protein3.3e-1036.76Show/hide
Query:  IKRLAHPISSIPTPTRPRPHYAAERQFSFQETPKFSRNLHRRPPSAAARLHLPRLPCINPKVVEFDRALERRVVVVDEEEAGGEGRWRLGGGACDYEEEE
        +K LAH  S+          Y  ERQ SF ETP F+       P+++ R  L  LPC  P  V+FD   E     +D ++   E +      +C  EEE+
Subjt:  IKRLAHPISSIPTPTRPRPHYAAERQFSFQETPKFSRNLHRRPPSAAARLHLPRLPCINPKVVEFDRALERRVVVVDEEEAGGEGRWRLGGGACDYEEEE

Query:  GDIEIDLRAEKFISMFYEEMKMQNQISYLPYHEFSD
        G   +D+RAE+FI+ FYE++K+Q Q+SYL Y + +D
Subjt:  GDIEIDLRAEKFISMFYEEMKMQNQISYLPYHEFSD

AT5G38700.1 unknown protein6.6e-1138.66Show/hide
Query:  ERQFSFQETPKFSRNLHRRPPSAAARLHLPRLPCINPKVVEFDRALERRVVVVDEEEAGGEGRW------RLGGGACDYEEEEGDIEIDLRAEKFISMFY
        E+Q SF ETP F+  +HR  P++   L    LPCI  +  +FD   E      D ++    G +      +    A D +EEE +  +D+RAE+FI+ FY
Subjt:  ERQFSFQETPKFSRNLHRRPPSAAARLHLPRLPCINPKVVEFDRALERRVVVVDEEEAGGEGRW------RLGGGACDYEEEEGDIEIDLRAEKFISMFY

Query:  EEMKMQNQISYLPYHEFSD
        E+MK+Q QISYL Y E +D
Subjt:  EEMKMQNQISYLPYHEFSD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCAACATTAGATGGGTCGCCGCTCGCAGAGCATGGAAAATGCTGAGCAATTTGAAGATTCAGGCCCCCCATCGCCGGCGCCGCCCCTTCACGATGGATCTCCGCCT
TGTGCGGTGGTTCATCAAGAGACTGGCCCACCCAATTAGCTCGATCCCGACCCCAACTCGTCCCCGCCCACATTATGCAGCAGAGCGGCAATTCTCATTCCAGGAGACCC
CAAAATTCAGCCGGAATTTGCACCGCCGGCCGCCGTCAGCCGCGGCGCGTCTCCACCTGCCGCGGCTCCCGTGCATAAACCCGAAGGTTGTTGAATTTGATCGCGCGTTG
GAGAGGCGTGTTGTGGTTGTTGATGAGGAGGAGGCCGGAGGGGAGGGGCGGTGGAGATTGGGCGGCGGCGCGTGTGATTATGAGGAGGAAGAAGGTGATATTGAGATTGA
TTTGAGAGCGGAGAAGTTTATAAGTATGTTTTATGAGGAGATGAAGATGCAGAATCAGATCTCGTATTTGCCGTATCATGAGTTTTCTGAT
mRNA sequenceShow/hide mRNA sequence
ATGTCCAACATTAGATGGGTCGCCGCTCGCAGAGCATGGAAAATGCTGAGCAATTTGAAGATTCAGGCCCCCCATCGCCGGCGCCGCCCCTTCACGATGGATCTCCGCCT
TGTGCGGTGGTTCATCAAGAGACTGGCCCACCCAATTAGCTCGATCCCGACCCCAACTCGTCCCCGCCCACATTATGCAGCAGAGCGGCAATTCTCATTCCAGGAGACCC
CAAAATTCAGCCGGAATTTGCACCGCCGGCCGCCGTCAGCCGCGGCGCGTCTCCACCTGCCGCGGCTCCCGTGCATAAACCCGAAGGTTGTTGAATTTGATCGCGCGTTG
GAGAGGCGTGTTGTGGTTGTTGATGAGGAGGAGGCCGGAGGGGAGGGGCGGTGGAGATTGGGCGGCGGCGCGTGTGATTATGAGGAGGAAGAAGGTGATATTGAGATTGA
TTTGAGAGCGGAGAAGTTTATAAGTATGTTTTATGAGGAGATGAAGATGCAGAATCAGATCTCGTATTTGCCGTATCATGAGTTTTCTGAT
Protein sequenceShow/hide protein sequence
MSNIRWVAARRAWKMLSNLKIQAPHRRRRPFTMDLRLVRWFIKRLAHPISSIPTPTRPRPHYAAERQFSFQETPKFSRNLHRRPPSAAARLHLPRLPCINPKVVEFDRAL
ERRVVVVDEEEAGGEGRWRLGGGACDYEEEEGDIEIDLRAEKFISMFYEEMKMQNQISYLPYHEFSD