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MS019008 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019008
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein of unknown function (DUF3511)
Genome locationscaffold20:655170..655484
RNA-Seq ExpressionMS019008
SyntenyMS019008
Gene Ontology termsNA
InterPro domainsIPR021899 - Protein of unknown function DUF3511


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_021904436.1 uncharacterized protein LOC110819513 [Carica papaya]7.6e-2560.55Show/hide
Query:  MSGFESGRVSHGGGRRIEVVSGK----GNAQIYAARAGSPSLPAGADRVARENRGGSAAAKPWGLGDPEAKRRKRIAKYKVYTVEGKVKDSLRKGLRWIK
        M G+ SG+ S+GG RR+E+VSGK     + QIYA+R  SP  P    R  R ++G  A+  PWG  DPE KR+KRIAKYKVYTVEGKVKDS++KGLRWIK
Subjt:  MSGFESGRVSHGGGRRIEVVSGK----GNAQIYAARAGSPSLPAGADRVARENRGGSAAAKPWGLGDPEAKRRKRIAKYKVYTVEGKVKDSLRKGLRWIK

Query:  NKCSRIVHG
        NKCS+IV G
Subjt:  NKCSRIVHG

XP_022949041.1 uncharacterized protein LOC111452504 [Cucurbita moschata]2.9e-2463.64Show/hide
Query:  MSGFESGRVSHGGGRRIEVVSGK-----GNAQIYAARAGSPSLPAGADRVARENRGGSAAAKPWGLGDPEAKRRKRIAKYKVYTVEGKVKDSLRKGLRWI
        M+ F+S   +HGGGR +E+VSGK     G+ QIY    GSP+L    +RV       +AAAKPW  GDPE KRRKRIAKYKVYTVEGKVKDSLRKGL+WI
Subjt:  MSGFESGRVSHGGGRRIEVVSGK-----GNAQIYAARAGSPSLPAGADRVARENRGGSAAAKPWGLGDPEAKRRKRIAKYKVYTVEGKVKDSLRKGLRWI

Query:  KNKCSRIVHG
        K KCSRIVHG
Subjt:  KNKCSRIVHG

XP_022998630.1 uncharacterized protein LOC111493216 [Cucurbita maxima]5.2e-2666.36Show/hide
Query:  MSGFESGRVSHGGGRRIEVVSGK-----GNAQIYAARAGSPSLPAGADRVARENRGGSAAAKPWGLGDPEAKRRKRIAKYKVYTVEGKVKDSLRKGLRWI
        M+ F+S   +HGGGRR+E+VSGK     G+ QIY    GSP+L   A+RV       SAAAKPW  GDPE KRRKRIAKYKVYTVEGKVKDSLRKGL+WI
Subjt:  MSGFESGRVSHGGGRRIEVVSGK-----GNAQIYAARAGSPSLPAGADRVARENRGGSAAAKPWGLGDPEAKRRKRIAKYKVYTVEGKVKDSLRKGLRWI

Query:  KNKCSRIVHG
        K KCSRIVHG
Subjt:  KNKCSRIVHG

XP_023524599.1 uncharacterized protein LOC111788494 [Cucurbita pepo subsp. pepo]1.7e-2463.64Show/hide
Query:  MSGFESGRVSHGGGRRIEVVSGK-----GNAQIYAARAGSPSLPAGADRVARENRGGSAAAKPWGLGDPEAKRRKRIAKYKVYTVEGKVKDSLRKGLRWI
        M+ F+S   +HGGGR +E+VSGK     G+ QIY    GSP+L    +RV       +AAAKPW  GDPE KRRKRIAKYKVYTVEGKVKDSLRKGL+WI
Subjt:  MSGFESGRVSHGGGRRIEVVSGK-----GNAQIYAARAGSPSLPAGADRVARENRGGSAAAKPWGLGDPEAKRRKRIAKYKVYTVEGKVKDSLRKGLRWI

Query:  KNKCSRIVHG
        K KCSRIVHG
Subjt:  KNKCSRIVHG

XP_031288008.1 uncharacterized protein LOC116146726 [Pistacia vera]1.4e-2663.96Show/hide
Query:  MSGFESGRVSHGGGRRIEVVSGK------GNAQIYAARAGSPSLPAGADRVARENRGGSAAAKPWGLGDPEAKRRKRIAKYKVYTVEGKVKDSLRKGLRW
        M GF SG+ S+GG RR+E+VSGK      G  QIY  R+ SP LP    R  R N   SA+ KPWG  DPE KR+KRIAKYKVYTVEGKVK SLRKG RW
Subjt:  MSGFESGRVSHGGGRRIEVVSGK------GNAQIYAARAGSPSLPAGADRVARENRGGSAAAKPWGLGDPEAKRRKRIAKYKVYTVEGKVKDSLRKGLRW

Query:  IKNKCSRIVHG
        IKNKCS+IVHG
Subjt:  IKNKCSRIVHG

TrEMBL top hitse value%identityAlignment
A0A2N9HEJ4 Uncharacterized protein1.1e-2464.22Show/hide
Query:  MSGFESGRVSHGGG--RRIEVVSGKG--NAQIYAARAGSPSLPAGADRVARENRGGSAAAKPWGLGDPEAKRRKRIAKYKVYTVEGKVKDSLRKGLRWIK
        M GF SG    GGG  RR+E+VSGKG  + Q+YA R  SP LP     V R +    AA+KPWG  DPE KR+KRIAKYKVYTVEGKVK SLRKGLRWIK
Subjt:  MSGFESGRVSHGGG--RRIEVVSGKG--NAQIYAARAGSPSLPAGADRVARENRGGSAAAKPWGLGDPEAKRRKRIAKYKVYTVEGKVKDSLRKGLRWIK

Query:  NKCSRIVHG
        NKCS+IV G
Subjt:  NKCSRIVHG

A0A5A7TMP6 Uncharacterized protein2.0e-2362.73Show/hide
Query:  MSGFESGRVSHGGGRRIEVVSGKGNA-----QIYAARAGSPSLPAGADRVARENRGGSAAAKPWGLGDPEAKRRKRIAKYKVYTVEGKVKDSLRKGLRWI
        MS F+S        RRIE+VSGK N      QIY     SP+L    +RV     G +AA KPWG  DPEAKRRKRIAKYKVYTVEG+VKDSLRKGLRWI
Subjt:  MSGFESGRVSHGGGRRIEVVSGKGNA-----QIYAARAGSPSLPAGADRVARENRGGSAAAKPWGLGDPEAKRRKRIAKYKVYTVEGKVKDSLRKGLRWI

Query:  KNKCSRIVHG
        KN+CSRIVHG
Subjt:  KNKCSRIVHG

A0A6J1A329 uncharacterized protein LOC1104145021.5e-2359.63Show/hide
Query:  MSGFESGRVSHGGGRRIEVVSGK----GNAQIYAARAGSPSLPAGADRVARENRGGSAAAKPWGLGDPEAKRRKRIAKYKVYTVEGKVKDSLRKGLRWIK
        M  + SG+  +G  RR+E+VSGK    G  QI+++R+ SP L    +R A  ++G   A+KPWG  DPE KR+KRIAKYKVYTVEGKVK SLRKGLRWIK
Subjt:  MSGFESGRVSHGGGRRIEVVSGK----GNAQIYAARAGSPSLPAGADRVARENRGGSAAAKPWGLGDPEAKRRKRIAKYKVYTVEGKVKDSLRKGLRWIK

Query:  NKCSRIVHG
        NKCS+IVHG
Subjt:  NKCSRIVHG

A0A6J1GAV9 uncharacterized protein LOC1114525041.4e-2463.64Show/hide
Query:  MSGFESGRVSHGGGRRIEVVSGK-----GNAQIYAARAGSPSLPAGADRVARENRGGSAAAKPWGLGDPEAKRRKRIAKYKVYTVEGKVKDSLRKGLRWI
        M+ F+S   +HGGGR +E+VSGK     G+ QIY    GSP+L    +RV       +AAAKPW  GDPE KRRKRIAKYKVYTVEGKVKDSLRKGL+WI
Subjt:  MSGFESGRVSHGGGRRIEVVSGK-----GNAQIYAARAGSPSLPAGADRVARENRGGSAAAKPWGLGDPEAKRRKRIAKYKVYTVEGKVKDSLRKGLRWI

Query:  KNKCSRIVHG
        K KCSRIVHG
Subjt:  KNKCSRIVHG

A0A6J1KD11 uncharacterized protein LOC1114932162.5e-2666.36Show/hide
Query:  MSGFESGRVSHGGGRRIEVVSGK-----GNAQIYAARAGSPSLPAGADRVARENRGGSAAAKPWGLGDPEAKRRKRIAKYKVYTVEGKVKDSLRKGLRWI
        M+ F+S   +HGGGRR+E+VSGK     G+ QIY    GSP+L   A+RV       SAAAKPW  GDPE KRRKRIAKYKVYTVEGKVKDSLRKGL+WI
Subjt:  MSGFESGRVSHGGGRRIEVVSGK-----GNAQIYAARAGSPSLPAGADRVARENRGGSAAAKPWGLGDPEAKRRKRIAKYKVYTVEGKVKDSLRKGLRWI

Query:  KNKCSRIVHG
        K KCSRIVHG
Subjt:  KNKCSRIVHG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G19460.1 Protein of unknown function (DUF3511)6.6e-1134.52Show/hide
Query:  SGKGNAQIYAARAGSPSLPAGADRVARENRGGSAAAKPWGLGDPEAKRRKRIAKYKVYTVEGKVKDSLRKGLRWIKNKCSRIVH
        SG G   + +        P          +G S+++  WG  DP+ +R+KR+  Y+ YTVEGK+K S RK  +WIK+KC+++++
Subjt:  SGKGNAQIYAARAGSPSLPAGADRVARENRGGSAAAKPWGLGDPEAKRRKRIAKYKVYTVEGKVKDSLRKGLRWIKNKCSRIVH

AT2G47480.1 Protein of unknown function (DUF3511)1.9e-2153.92Show/hide
Query:  GFESGRVSHGGGRRIEVVSGKGNAQIYAARAGSPSLPAGADRVARENRGGSAAAKPWGLGDPEAKRRKRIAKYKVYTVEGKVKDSLRKGLRWIKNKCSRI
        G+ SG+ ++G  RR E+VSGK N QIY  R   PSLP    +VA      S++ +  GL D E KR+KRIA+YK YTVEGKVK +L+ G RWIKNKC +I
Subjt:  GFESGRVSHGGGRRIEVVSGKGNAQIYAARAGSPSLPAGADRVARENRGGSAAAKPWGLGDPEAKRRKRIAKYKVYTVEGKVKDSLRKGLRWIKNKCSRI

Query:  VH
        VH
Subjt:  VH

AT3G05725.1 Protein of unknown function (DUF3511)5.1e-1150.85Show/hide
Query:  RENRGGSAAAKPWGLGDPEAKRRKRIAKYKVYTVEGKVKDSLRKGLRWIKNKCSRIVHG
        R +   S   K W   DPE KR++R+AKYK+Y+ EGK+K +LRK  +WIK +CS+I+HG
Subjt:  RENRGGSAAAKPWGLGDPEAKRRKRIAKYKVYTVEGKVKDSLRKGLRWIKNKCSRIVHG

AT3G62640.1 Protein of unknown function (DUF3511)3.2e-1338.18Show/hide
Query:  MSGFESGRVSHGGGRRIEVVSGK-----GNAQIYAARAGSPSLPAGADRVARENRGGSAAAKPWGLGDPEAKRRKRIAKYKVYTVEGKVKDSLRKGLRWI
        M GF S   +    + +++V+GK     G  Q+Y+ R  SP                   A PW L D E KR+KRIA YK Y +EGKVK +++KG  WI
Subjt:  MSGFESGRVSHGGGRRIEVVSGK-----GNAQIYAARAGSPSLPAGADRVARENRGGSAAAKPWGLGDPEAKRRKRIAKYKVYTVEGKVKDSLRKGLRWI

Query:  KNKCSRIVHG
        K++ S I+HG
Subjt:  KNKCSRIVHG

AT5G11970.1 Protein of unknown function (DUF3511)3.3e-1035.96Show/hide
Query:  MSGFESGRVSHGGGRRIEVVSGK--GNAQIYAARAGSPSLPAGADRVAREN-------RGGSAAAKPWGLGDPEAKRRKRIAKYKVYTVEGKVKDSLRKG
        M  F   R    GG +I+   G   G+ + Y+A  G+           REN           A +K WG+ DPE +R+KR+A YK+Y VEGKVK S R  
Subjt:  MSGFESGRVSHGGGRRIEVVSGK--GNAQIYAARAGSPSLPAGADRVAREN-------RGGSAAAKPWGLGDPEAKRRKRIAKYKVYTVEGKVKDSLRKG

Query:  LRWIKNKCSRIVHG
         RW+K + +++V+G
Subjt:  LRWIKNKCSRIVHG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCGGGTTCGAATCGGGTCGGGTCTCTCACGGCGGCGGCCGGAGGATCGAGGTCGTGAGCGGCAAAGGGAACGCCCAGATCTACGCGGCGCGGGCCGGGTCCCCGAG
TCTGCCGGCGGGTGCGGACCGGGTCGCCCGGGAGAACCGGGGCGGGTCTGCGGCGGCGAAGCCTTGGGGGTTGGGCGACCCGGAGGCGAAGCGGAGGAAGAGGATTGCCA
AGTATAAAGTTTATACGGTTGAAGGGAAGGTGAAAGATTCGCTGCGGAAGGGACTACGGTGGATTAAGAACAAGTGCTCTCGGATTGTCCATGGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCGGGTTCGAATCGGGTCGGGTCTCTCACGGCGGCGGCCGGAGGATCGAGGTCGTGAGCGGCAAAGGGAACGCCCAGATCTACGCGGCGCGGGCCGGGTCCCCGAG
TCTGCCGGCGGGTGCGGACCGGGTCGCCCGGGAGAACCGGGGCGGGTCTGCGGCGGCGAAGCCTTGGGGGTTGGGCGACCCGGAGGCGAAGCGGAGGAAGAGGATTGCCA
AGTATAAAGTTTATACGGTTGAAGGGAAGGTGAAAGATTCGCTGCGGAAGGGACTACGGTGGATTAAGAACAAGTGCTCTCGGATTGTCCATGGA
Protein sequenceShow/hide protein sequence
MSGFESGRVSHGGGRRIEVVSGKGNAQIYAARAGSPSLPAGADRVARENRGGSAAAKPWGLGDPEAKRRKRIAKYKVYTVEGKVKDSLRKGLRWIKNKCSRIVHG