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MS019009 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019009
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionF5K24.2-like protein
Genome locationscaffold20:671876..672331
RNA-Seq ExpressionMS019009
SyntenyMS019009
Gene Ontology termsGO:0005694 - chromosome (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649052.1 hypothetical protein Csa_015094 [Cucumis sativus]2.0e-4265.61Show/hide
Query:  MEEDGVLEREKWYQGLIRGHWKTRNYEKLNRPSRSRRRRARVELGSNRKRGGRFWRIKISPNLRFFRSIPSPKKLLLRLRDAYVRMMLGFANSRVFS---
        M+EDGV   EKWYQGL R +WK +NY+KLN  SR RRR A+VELGS R    RFWRIKISP  RF R IPSPKKLLLRLRDAYV MMLGFANSRVF+   
Subjt:  MEEDGVLEREKWYQGLIRGHWKTRNYEKLNRPSRSRRRRARVELGSNRKRGGRFWRIKISPNLRFFRSIPSPKKLLLRLRDAYVRMMLGFANSRVFS---

Query:  --AAPVPDGIAGFGRRPVKEYDDKMILEIYKSMVAAQRQFVNCTAAGGPETETAVSR
           A V DGI GFG+R  KEYD+KMILEIYKS+VA QR+ ++   A G   ETA  R
Subjt:  --AAPVPDGIAGFGRRPVKEYDDKMILEIYKSMVAAQRQFVNCTAAGGPETETAVSR

XP_004152233.1 uncharacterized protein LOC101222359 [Cucumis sativus]2.0e-4265.61Show/hide
Query:  MEEDGVLEREKWYQGLIRGHWKTRNYEKLNRPSRSRRRRARVELGSNRKRGGRFWRIKISPNLRFFRSIPSPKKLLLRLRDAYVRMMLGFANSRVFS---
        M+EDGV   EKWYQGL R +WK +NY+KLN  SR RRR A+VELGS R    RFWRIKISP  RF R IPSPKKLLLRLRDAYV MMLGFANSRVF+   
Subjt:  MEEDGVLEREKWYQGLIRGHWKTRNYEKLNRPSRSRRRRARVELGSNRKRGGRFWRIKISPNLRFFRSIPSPKKLLLRLRDAYVRMMLGFANSRVFS---

Query:  --AAPVPDGIAGFGRRPVKEYDDKMILEIYKSMVAAQRQFVNCTAAGGPETETAVSR
           A V DGI GFG+R  KEYD+KMILEIYKS+VA QR+ ++   A G   ETA  R
Subjt:  --AAPVPDGIAGFGRRPVKEYDDKMILEIYKSMVAAQRQFVNCTAAGGPETETAVSR

XP_022155311.1 uncharacterized protein LOC111022443 [Momordica charantia]3.8e-7899.34Show/hide
Query:  MEEDGVLEREKWYQGLIRGHWKTRNYEKLNRPSRSRRRRARVELGSNRKRGGRFWRIKISPNLRFFRSIPSPKKLLLRLRDAYVRMMLGFANSRVFSAAP
        MEEDGVLEREKWYQGLIRGHWKTRNYEKLNRPSRSRRRRARVELGSNRKRGGRFWRIKIS NLRFFRSIPSPKKLLLRLRDAYVRMMLGFANSRVFSAAP
Subjt:  MEEDGVLEREKWYQGLIRGHWKTRNYEKLNRPSRSRRRRARVELGSNRKRGGRFWRIKISPNLRFFRSIPSPKKLLLRLRDAYVRMMLGFANSRVFSAAP

Query:  VPDGIAGFGRRPVKEYDDKMILEIYKSMVAAQRQFVNCTAAGGPETETAVSR
        VPDGIAGFGRRPVKEYDDKMILEIYKSMVAAQRQFVNCTAAGGPETETAVSR
Subjt:  VPDGIAGFGRRPVKEYDDKMILEIYKSMVAAQRQFVNCTAAGGPETETAVSR

XP_023525311.1 uncharacterized protein LOC111788948 [Cucurbita pepo subsp. pepo]6.8e-4367.11Show/hide
Query:  MEEDGVLEREKWYQGLIRGHWKTRNYEKLNRPSRSRRRRARVELGSNRKRGGRFWRIKISPNLRFFRSIPSPKKLLLRLRDAYVRMMLGFANSRVFS---
        M+E+GV   EKW+QG IRG+WK R Y+KLNR SR RRR A++  GS +    RFWR KISP LRF R  PSPKKLL+RLRDAYV MMLG ANSRVFS   
Subjt:  MEEDGVLEREKWYQGLIRGHWKTRNYEKLNRPSRSRRRRARVELGSNRKRGGRFWRIKISPNLRFFRSIPSPKKLLLRLRDAYVRMMLGFANSRVFS---

Query:  AAPVPDGIAGFGRRPVKEYDDKMILEIYKSMVAAQRQFVNCTAA-GGPETET
        AA + DG+AGFG+RP KEYD+K+ILEIYKSMVAAQRQ V+  AA  GPE ET
Subjt:  AAPVPDGIAGFGRRPVKEYDDKMILEIYKSMVAAQRQFVNCTAA-GGPETET

XP_038905283.1 uncharacterized protein LOC120091357 [Benincasa hispida]3.5e-4770.06Show/hide
Query:  MEEDGVLEREKWYQGLIRGHWKTRNYEKLNRPSRSRRRRARVELGSNRKRGGRFWRIKISPNLRFFRSIPSPKKLLLRLRDAYVRMMLGFANSRVFS---
        M+ED V   EKWYQGL RG+WK +NYEKLN  SR RRR A+VELGS R    RFWRIKISP LRF R +PSPKKLLLRLRDAYV MMLGFANSRVF+   
Subjt:  MEEDGVLEREKWYQGLIRGHWKTRNYEKLNRPSRSRRRRARVELGSNRKRGGRFWRIKISPNLRFFRSIPSPKKLLLRLRDAYVRMMLGFANSRVFS---

Query:  --AAPVPDGIAGFGRRPVKEYDDKMILEIYKSMVAAQRQFVNCTAAGGPETETAVSR
          +A V DGI GFG+RP KEYD+KMIL+IYKSMVAAQRQ V+  AA G E ETA S+
Subjt:  --AAPVPDGIAGFGRRPVKEYDDKMILEIYKSMVAAQRQFVNCTAAGGPETETAVSR

TrEMBL top hitse value%identityAlignment
A0A0A0KTE2 Uncharacterized protein9.6e-4365.61Show/hide
Query:  MEEDGVLEREKWYQGLIRGHWKTRNYEKLNRPSRSRRRRARVELGSNRKRGGRFWRIKISPNLRFFRSIPSPKKLLLRLRDAYVRMMLGFANSRVFS---
        M+EDGV   EKWYQGL R +WK +NY+KLN  SR RRR A+VELGS R    RFWRIKISP  RF R IPSPKKLLLRLRDAYV MMLGFANSRVF+   
Subjt:  MEEDGVLEREKWYQGLIRGHWKTRNYEKLNRPSRSRRRRARVELGSNRKRGGRFWRIKISPNLRFFRSIPSPKKLLLRLRDAYVRMMLGFANSRVFS---

Query:  --AAPVPDGIAGFGRRPVKEYDDKMILEIYKSMVAAQRQFVNCTAAGGPETETAVSR
           A V DGI GFG+R  KEYD+KMILEIYKS+VA QR+ ++   A G   ETA  R
Subjt:  --AAPVPDGIAGFGRRPVKEYDDKMILEIYKSMVAAQRQFVNCTAAGGPETETAVSR

A0A1S3BZ24 uncharacterized protein LOC1034947421.3e-4265.61Show/hide
Query:  MEEDGVLEREKWYQGLIRGHWKTRNYEKLNRPSRSRRRRARVELGSNRKRGGRFWRIKISPNLRFFRSIPSPKKLLLRLRDAYVRMMLGFANSRVFS---
        M+EDG    EKWYQGL  G+WK  NYEKLN  SR RRR A+VELGS R    RFWRIKISP  RF R IPSPKKLLLRLRDAYV MMLGFANSRVF+   
Subjt:  MEEDGVLEREKWYQGLIRGHWKTRNYEKLNRPSRSRRRRARVELGSNRKRGGRFWRIKISPNLRFFRSIPSPKKLLLRLRDAYVRMMLGFANSRVFS---

Query:  --AAPVPDGIAGFGRRPVKEYDDKMILEIYKSMVAAQRQFVNCTAAGGPETETAVSR
           A V DGI GFG+RP KEYD+KMILEIYKS+VA QR+  +  A  G    TA  R
Subjt:  --AAPVPDGIAGFGRRPVKEYDDKMILEIYKSMVAAQRQFVNCTAAGGPETETAVSR

A0A5D3BW14 Putative carrier protein1.3e-4265.61Show/hide
Query:  MEEDGVLEREKWYQGLIRGHWKTRNYEKLNRPSRSRRRRARVELGSNRKRGGRFWRIKISPNLRFFRSIPSPKKLLLRLRDAYVRMMLGFANSRVFS---
        M+EDG    EKWYQGL  G+WK  NYEKLN  SR RRR A+VELGS R    RFWRIKISP  RF R IPSPKKLLLRLRDAYV MMLGFANSRVF+   
Subjt:  MEEDGVLEREKWYQGLIRGHWKTRNYEKLNRPSRSRRRRARVELGSNRKRGGRFWRIKISPNLRFFRSIPSPKKLLLRLRDAYVRMMLGFANSRVFS---

Query:  --AAPVPDGIAGFGRRPVKEYDDKMILEIYKSMVAAQRQFVNCTAAGGPETETAVSR
           A V DGI GFG+RP KEYD+KMILEIYKS+VA QR+  +  A  G    TA  R
Subjt:  --AAPVPDGIAGFGRRPVKEYDDKMILEIYKSMVAAQRQFVNCTAAGGPETETAVSR

A0A6J1DRC6 uncharacterized protein LOC1110224431.9e-7899.34Show/hide
Query:  MEEDGVLEREKWYQGLIRGHWKTRNYEKLNRPSRSRRRRARVELGSNRKRGGRFWRIKISPNLRFFRSIPSPKKLLLRLRDAYVRMMLGFANSRVFSAAP
        MEEDGVLEREKWYQGLIRGHWKTRNYEKLNRPSRSRRRRARVELGSNRKRGGRFWRIKIS NLRFFRSIPSPKKLLLRLRDAYVRMMLGFANSRVFSAAP
Subjt:  MEEDGVLEREKWYQGLIRGHWKTRNYEKLNRPSRSRRRRARVELGSNRKRGGRFWRIKISPNLRFFRSIPSPKKLLLRLRDAYVRMMLGFANSRVFSAAP

Query:  VPDGIAGFGRRPVKEYDDKMILEIYKSMVAAQRQFVNCTAAGGPETETAVSR
        VPDGIAGFGRRPVKEYDDKMILEIYKSMVAAQRQFVNCTAAGGPETETAVSR
Subjt:  VPDGIAGFGRRPVKEYDDKMILEIYKSMVAAQRQFVNCTAAGGPETETAVSR

A0A6J1GBM5 uncharacterized protein LOC1114524949.6e-4366.45Show/hide
Query:  MEEDGVLEREKWYQGLIRGHWKTRNYEKLNRPSRSRRRRARVELGSNRKRGGRFWRIKISPNLRFFRSIPSPKKLLLRLRDAYVRMMLGFANSRVFS---
        M+E+GV   EKW+QG IRG+WK R Y+KLNR SR RRR A++ LGS +    RFWR+KISP LRF R  PSPKKLL+RLRDAYV MMLG ANSRVFS   
Subjt:  MEEDGVLEREKWYQGLIRGHWKTRNYEKLNRPSRSRRRRARVELGSNRKRGGRFWRIKISPNLRFFRSIPSPKKLLLRLRDAYVRMMLGFANSRVFS---

Query:  AAPVPDGIAGFGRRPVKEYDDKMILEIYKSMVAAQRQFVNCTAA-GGPETET
        AA + DG+AGFG+RP KEYD+K+ILEIYKSMVAAQRQ  +  AA  G E ET
Subjt:  AAPVPDGIAGFGRRPVKEYDDKMILEIYKSMVAAQRQFVNCTAA-GGPETET

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G47485.1 unknown protein3.4e-1646.83Show/hide
Query:  IRGHWKTRNYEKLN----RPSRSRRRRARVELGSNRKRGGRFWRIKISPNLRFFRSIPSPKKLLLRLRDAYVRMMLGFANSRVFSAAPVPDGIAGFGR-R
        IR   + R Y++L+    + S  RR   RV++   RKR  RFWRIKI P LR  +   SPKKLL  LRDAYV MML  ANSRV  ++    G  G+G   
Subjt:  IRGHWKTRNYEKLN----RPSRSRRRRARVELGSNRKRGGRFWRIKISPNLRFFRSIPSPKKLLLRLRDAYVRMMLGFANSRVFSAAPVPDGIAGFGR-R

Query:  PVKEYDDKMILEIYKSMVAAQRQFVN
          KEYD+K ++EIYKS++ AQ   V+
Subjt:  PVKEYDDKMILEIYKSMVAAQRQFVN

AT3G62650.1 unknown protein4.3e-1947.9Show/hide
Query:  HWKT-RNYEKLNRPSRS---RRRRARVELGSNRKRGGRFWRIKISPNLRFFRSIPSPKKLLLRLRDAYVRMMLGFANSRVFSAAPVPDGIAGFGRRPVKE
        +W+  R YEKL+  S +   RR+  RV++   RK+  RFWRIKI P LR  ++  SPKK L+ LRD+YV+MM+  ANSRV  ++    G +GFG   +KE
Subjt:  HWKT-RNYEKLNRPSRS---RRRRARVELGSNRKRGGRFWRIKISPNLRFFRSIPSPKKLLLRLRDAYVRMMLGFANSRVFSAAPVPDGIAGFGRRPVKE

Query:  YDDKMILEIYKSMVAAQRQ
        YD+KM++EIYKS++  Q Q
Subjt:  YDDKMILEIYKSMVAAQRQ

AT3G62650.2 unknown protein4.3e-1947.9Show/hide
Query:  HWKT-RNYEKLNRPSRS---RRRRARVELGSNRKRGGRFWRIKISPNLRFFRSIPSPKKLLLRLRDAYVRMMLGFANSRVFSAAPVPDGIAGFGRRPVKE
        +W+  R YEKL+  S +   RR+  RV++   RK+  RFWRIKI P LR  ++  SPKK L+ LRD+YV+MM+  ANSRV  ++    G +GFG   +KE
Subjt:  HWKT-RNYEKLNRPSRS---RRRRARVELGSNRKRGGRFWRIKISPNLRFFRSIPSPKKLLLRLRDAYVRMMLGFANSRVFSAAPVPDGIAGFGRRPVKE

Query:  YDDKMILEIYKSMVAAQRQ
        YD+KM++EIYKS++  Q Q
Subjt:  YDDKMILEIYKSMVAAQRQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAAGATGGAGTTCTAGAGAGAGAGAAGTGGTACCAGGGGCTAATAAGAGGCCACTGGAAAACAAGAAACTACGAGAAGCTGAACCGGCCGTCGAGAAGCAGGAG
GCGCCGGGCCCGGGTGGAGCTCGGTTCGAACCGGAAGAGGGGCGGCCGGTTCTGGCGGATCAAGATCTCCCCAAATCTCCGGTTCTTCCGGTCCATACCTTCCCCCAAAA
AACTCCTCCTCCGCCTCCGCGATGCCTACGTCAGAATGATGCTCGGATTCGCCAACTCCCGGGTCTTCTCCGCCGCCCCCGTCCCCGACGGCATTGCCGGCTTCGGACGC
CGGCCGGTCAAGGAATACGACGACAAGATGATCCTCGAGATCTACAAATCGATGGTGGCGGCCCAGCGGCAGTTCGTGAACTGCACCGCCGCCGGAGGACCGGAGACGGA
AACCGCTGTCTCCAGG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAAGATGGAGTTCTAGAGAGAGAGAAGTGGTACCAGGGGCTAATAAGAGGCCACTGGAAAACAAGAAACTACGAGAAGCTGAACCGGCCGTCGAGAAGCAGGAG
GCGCCGGGCCCGGGTGGAGCTCGGTTCGAACCGGAAGAGGGGCGGCCGGTTCTGGCGGATCAAGATCTCCCCAAATCTCCGGTTCTTCCGGTCCATACCTTCCCCCAAAA
AACTCCTCCTCCGCCTCCGCGATGCCTACGTCAGAATGATGCTCGGATTCGCCAACTCCCGGGTCTTCTCCGCCGCCCCCGTCCCCGACGGCATTGCCGGCTTCGGACGC
CGGCCGGTCAAGGAATACGACGACAAGATGATCCTCGAGATCTACAAATCGATGGTGGCGGCCCAGCGGCAGTTCGTGAACTGCACCGCCGCCGGAGGACCGGAGACGGA
AACCGCTGTCTCCAGG
Protein sequenceShow/hide protein sequence
MEEDGVLEREKWYQGLIRGHWKTRNYEKLNRPSRSRRRRARVELGSNRKRGGRFWRIKISPNLRFFRSIPSPKKLLLRLRDAYVRMMLGFANSRVFSAAPVPDGIAGFGR
RPVKEYDDKMILEIYKSMVAAQRQFVNCTAAGGPETETAVSR