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MS019028 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019028
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like
Genome locationscaffold20:825756..825968
RNA-Seq ExpressionMS019028
SyntenyMS019028
Gene Ontology termsNA
InterPro domainsIPR004926 - Late embryogenesis abundant protein, LEA_3 subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606955.1 Protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]5.3e-1460.24Show/hide
Query:  RRGYAA------------VAADRVVAKSGSKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRRKIVN
        RRGY A             AA+ V A+SG   KKEE ERST E  AWVPDPVTGYYRPEN  D ID VDLRAMLLKP R ++N
Subjt:  RRGYAA------------VAADRVVAKSGSKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRRKIVN

KAG7036659.1 Protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]6.9e-1467.16Show/hide
Query:  AAVAADRVVAKSGSKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRRKIVN
        +  AA+ V A+SG   KKEE ERST E  AWVPDPVTGYYRPEN  D ID VDLRAMLLKP R ++N
Subjt:  AAVAADRVVAKSGSKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRRKIVN

XP_022155319.1 protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like [Momordica charantia]1.9e-1667.16Show/hide
Query:  AAVAADRVVAKSGSKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRRKIVN
        ++ AA R  A+ G   KKEEA RS+ EK+AWVPDPVTG+YRPENC+DEID  DLRA+LLKPRR I+N
Subjt:  AAVAADRVVAKSGSKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRRKIVN

XP_022155320.1 late embryogenis abundant protein 2-like [Momordica charantia]1.1e-30100Show/hide
Query:  RRGYAAVAADRVVAKSGSKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRRKIVN
        RRGYAAVAADRVVAKSGSKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRRKIVN
Subjt:  RRGYAAVAADRVVAKSGSKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRRKIVN

XP_023528769.1 protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like [Cucurbita pepo subsp. pepo]5.3e-1463.01Show/hide
Query:  RRGYAA---VAADRVVAKSGSKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRRKIV
        RRGY A    A+ R     G   K+E+AERS  EK+AWVPDPVTGYYRPEN +DEID VDLRAM+L+PRRK +
Subjt:  RRGYAA---VAADRVVAKSGSKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRRKIV

TrEMBL top hitse value%identityAlignment
A0A6J1DM52 late embryogenis abundant protein 2-like5.2e-31100Show/hide
Query:  RRGYAAVAADRVVAKSGSKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRRKIVN
        RRGYAAVAADRVVAKSGSKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRRKIVN
Subjt:  RRGYAAVAADRVVAKSGSKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRRKIVN

A0A6J1DPX0 protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like9.4e-1767.16Show/hide
Query:  AAVAADRVVAKSGSKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRRKIVN
        ++ AA R  A+ G   KKEEA RS+ EK+AWVPDPVTG+YRPENC+DEID  DLRA+LLKPRR I+N
Subjt:  AAVAADRVVAKSGSKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRRKIVN

A0A6J1F2C1 protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like7.5e-1463.01Show/hide
Query:  RRGYAA---VAADRVVAKSGSKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRRKIV
        RRGY A    A+ R     G   K E+AERS  EK+AWVPDPVTGYYRPEN +DEID VDLRAM+L+PRRK +
Subjt:  RRGYAA---VAADRVVAKSGSKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRRKIV

A0A6J1GAX2 protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like2.8e-1356.63Show/hide
Query:  RRGYAA------------VAADRVVAKSGSKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRRKIVN
        RRGY A             AA+ V A+SG   KKEE ER T E  AW+PDPVTGYYRPEN  + ID VDLRAMLLKP+R ++N
Subjt:  RRGYAA------------VAADRVVAKSGSKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRRKIVN

A0A6J1GC45 protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like4.8e-1364.71Show/hide
Query:  RRGYAAVAADRVVAKSGSKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRRK
        RRGYAA A   V A+ G+KT K      + EK +WVPDPVTGYYRPENCA EID  DLRAMLLK  RK
Subjt:  RRGYAAVAADRVVAKSGSKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRRK

SwissProt top hitse value%identityAlignment
P46521 Late embryogenesis abundant protein Lea5-A4.5e-0845.45Show/hide
Query:  RRGYAAVAADRVVAKSGSKTKKEEAER--------STEEK---MAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPR
        RRGY+      V A  G      + ER        S+E +    AW PDPVTGYYRPENC  EID  DLR M+L  R
Subjt:  RRGYAAVAADRVVAKSGSKTKKEEAER--------STEEK---MAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPR

P46522 Late embryogenesis abundant protein Lea5-D3.5e-0846.75Show/hide
Query:  RRGYAAVAADRVVAKSG-----SKTKKEEA--ERSTEE----KMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPR
        RRGY+      V A  G      K ++ +A  E S+ E      AW PDPVTGYYRPENC  EID  +LR MLL  R
Subjt:  RRGYAAVAADRVVAKSG-----SKTKKEEA--ERSTEE----KMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPR

Q39644 Late embryogenesis abundant protein Lea54.1e-0950Show/hide
Query:  RRGYAAVAADRVVAKSGSKTKKEEAERSTEE---KMAWVPDPVTGYYRPENCADEIDPVDLRAMLL
        RRGYAA A    ++++G   K +      E+     AW PDP+TGYYRPEN A EIDP +LR MLL
Subjt:  RRGYAAVAADRVVAKSGSKTKKEEAERSTEE---KMAWVPDPVTGYYRPENCADEIDPVDLRAMLL

Q93WF6 Protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial3.1e-0948.65Show/hide
Query:  RRGYAAVAADRVVAKSG-------SKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRR
        RRGYAA AA   V+  G       +  KK+  E ST +K++WVPDP TGYYRPE  ++EID  +LRA LL  ++
Subjt:  RRGYAAVAADRVVAKSG-------SKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRR

Q9SRX6 Late embryogenis abundant protein 24.8e-1046.27Show/hide
Query:  RRGYAAVAADRVVAKSGSKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRR
        RRG+AA A   +     +   K+ A  ++ EK  WVPDP TGYYRPE  ++EIDP +LRA+LL  ++
Subjt:  RRGYAAVAADRVVAKSGSKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRR

Arabidopsis top hitse value%identityAlignment
AT1G02820.1 Late embryogenesis abundant 3 (LEA3) family protein3.4e-1146.27Show/hide
Query:  RRGYAAVAADRVVAKSGSKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRR
        RRG+AA A   +     +   K+ A  ++ EK  WVPDP TGYYRPE  ++EIDP +LRA+LL  ++
Subjt:  RRGYAAVAADRVVAKSGSKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRR

AT3G53770.2 late embryogenesis abundant 3 (LEA3) family protein5.1e-0740.74Show/hide
Query:  SKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRRKIVN
        +KT + + +    E++ W+PDP TGYYRP+N A E+D V+LR++     +K  N
Subjt:  SKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRRKIVN

AT4G02380.1 senescence-associated gene 212.2e-1048.65Show/hide
Query:  RRGYAAVAADRVVAKSG-------SKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRR
        RRGYAA AA   V+  G       +  KK+  E ST +K++WVPDP TGYYRPE  ++EID  +LRA LL  ++
Subjt:  RRGYAAVAADRVVAKSG-------SKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRR

AT4G02380.2 senescence-associated gene 215.0e-1047.3Show/hide
Query:  RRGYAAVAADRVVAKSG-------SKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRR
        +RGYAA AA   V+  G       +  KK+  E ST +K++WVPDP TGYYRPE  ++EID  +LRA LL  ++
Subjt:  RRGYAAVAADRVVAKSG-------SKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRR

AT4G15910.1 drought-induced 217.2e-0946.67Show/hide
Query:  RRGYAAVAADRVVA---KSGSKT----KKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRRK
        RR Y A + +   A   K GS      K E+     E + AW PDPVTGYYRP N A EIDP +LR +LLK + K
Subjt:  RRGYAAVAADRVVA---KSGSKT----KKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGGCGAGGATATGCGGCGGTGGCGGCGGATAGAGTTGTGGCAAAAAGTGGCAGCAAAACGAAGAAGGAAGAAGCAGAAAGAAGTACAGAAGAGAAGATGGCGTGGGTCCC
TGATCCGGTGACCGGTTACTACCGGCCGGAGAACTGCGCCGACGAGATCGATCCCGTCGACCTCCGTGCTATGCTTCTGAAGCCGAGAAGAAAAATAGTCAAT
mRNA sequenceShow/hide mRNA sequence
AGGCGAGGATATGCGGCGGTGGCGGCGGATAGAGTTGTGGCAAAAAGTGGCAGCAAAACGAAGAAGGAAGAAGCAGAAAGAAGTACAGAAGAGAAGATGGCGTGGGTCCC
TGATCCGGTGACCGGTTACTACCGGCCGGAGAACTGCGCCGACGAGATCGATCCCGTCGACCTCCGTGCTATGCTTCTGAAGCCGAGAAGAAAAATAGTCAAT
Protein sequenceShow/hide protein sequence
RRGYAAVAADRVVAKSGSKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRRKIVN