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MS019029 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019029
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionindole-3-acetic acid-induced protein ARG2-like
Genome locationscaffold20:830551..830796
RNA-Seq ExpressionMS019029
SyntenyMS019029
Gene Ontology termsNA
InterPro domainsIPR004926 - Late embryogenesis abundant protein, LEA_3 subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606955.1 Protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]8.6e-1663.41Show/hide
Query:  REYSAAAAAASQGVASSAAAGRFPARGGGVMKKEEAVRSSREKVAWVPDPVTGFYRPENCSDEIDAADLRALLLKPRRNIIN
        R Y A A AASQ VAS  AA    AR GG++KKEE  RS+ E  AWVPDPVTG+YRPEN +D ID  DLRA+LLKP RN++N
Subjt:  REYSAAAAAASQGVASSAAAGRFPARGGGVMKKEEAVRSSREKVAWVPDPVTGFYRPENCSDEIDAADLRALLLKPRRNIIN

KAG7036659.1 Protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]4.2e-1560.98Show/hide
Query:  REYSAAAAAASQGVASSAAAGRFPARGGGVMKKEEAVRSSREKVAWVPDPVTGFYRPENCSDEIDAADLRALLLKPRRNIIN
        R Y A A AA++ VAS  AA    AR GG++KKEE  RS+ E  AWVPDPVTG+YRPEN +D ID  DLRA+LLKP RN++N
Subjt:  REYSAAAAAASQGVASSAAAGRFPARGGGVMKKEEAVRSSREKVAWVPDPVTGFYRPENCSDEIDAADLRALLLKPRRNIIN

XP_022155319.1 protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like [Momordica charantia]3.5e-3398.78Show/hide
Query:  REYSAAAAAASQGVASSAAAGRFPARGGGVMKKEEAVRSSREKVAWVPDPVTGFYRPENCSDEIDAADLRALLLKPRRNIIN
        REYS AAAAASQGVASSAAAGRFPARGGGVMKKEEAVRSSREKVAWVPDPVTGFYRPENCSDEIDAADLRALLLKPRRNIIN
Subjt:  REYSAAAAAASQGVASSAAAGRFPARGGGVMKKEEAVRSSREKVAWVPDPVTGFYRPENCSDEIDAADLRALLLKPRRNIIN

XP_022155320.1 late embryogenis abundant protein 2-like [Momordica charantia]1.0e-1667.16Show/hide
Query:  SSAAAGRFPARGGGVMKKEEAVRSSREKVAWVPDPVTGFYRPENCSDEIDAADLRALLLKPRRNIIN
        ++ AA R  A+ G   KKEEA RS+ EK+AWVPDPVTG+YRPENC+DEID  DLRA+LLKPRR I+N
Subjt:  SSAAAGRFPARGGGVMKKEEAVRSSREKVAWVPDPVTGFYRPENCSDEIDAADLRALLLKPRRNIIN

XP_038903721.1 protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like [Benincasa hispida]2.4e-1869.51Show/hide
Query:  REYSAAAAAASQGVASSAAAGRFPARGGGVMKKEEAVRSSREKVAWVPDPVTGFYRPENCSDEIDAADLRALLLKPRRNIIN
        R Y+A A AASQ VAS++AA   PAR  G+MKKEE+  +S EK AWVPDPVTG+YRPEN +D IDA DLRA LLKPRRNIIN
Subjt:  REYSAAAAAASQGVASSAAAGRFPARGGGVMKKEEAVRSSREKVAWVPDPVTGFYRPENCSDEIDAADLRALLLKPRRNIIN

TrEMBL top hitse value%identityAlignment
A0A6J1DM52 late embryogenis abundant protein 2-like4.9e-1767.16Show/hide
Query:  SSAAAGRFPARGGGVMKKEEAVRSSREKVAWVPDPVTGFYRPENCSDEIDAADLRALLLKPRRNIIN
        ++ AA R  A+ G   KKEEA RS+ EK+AWVPDPVTG+YRPENC+DEID  DLRA+LLKPRR I+N
Subjt:  SSAAAGRFPARGGGVMKKEEAVRSSREKVAWVPDPVTGFYRPENCSDEIDAADLRALLLKPRRNIIN

A0A6J1DPX0 protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like1.7e-3398.78Show/hide
Query:  REYSAAAAAASQGVASSAAAGRFPARGGGVMKKEEAVRSSREKVAWVPDPVTGFYRPENCSDEIDAADLRALLLKPRRNIIN
        REYS AAAAASQGVASSAAAGRFPARGGGVMKKEEAVRSSREKVAWVPDPVTGFYRPENCSDEIDAADLRALLLKPRRNIIN
Subjt:  REYSAAAAAASQGVASSAAAGRFPARGGGVMKKEEAVRSSREKVAWVPDPVTGFYRPENCSDEIDAADLRALLLKPRRNIIN

A0A6J1F2C1 protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like1.0e-1465.67Show/hide
Query:  ASSAAAGRFPARGGGVMKKEEAVRSSREKVAWVPDPVTGFYRPENCSDEIDAADLRALLLKPRRNII
        A + AA +  AR  G+MKK E    SREKVAWVPDPVTG+YRPEN SDEIDA DLRA++L+PRR  I
Subjt:  ASSAAAGRFPARGGGVMKKEEAVRSSREKVAWVPDPVTGFYRPENCSDEIDAADLRALLLKPRRNII

A0A6J1GAX2 protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like4.6e-1559.76Show/hide
Query:  REYSAAAAAASQGVASSAAAGRFPARGGGVMKKEEAVRSSREKVAWVPDPVTGFYRPENCSDEIDAADLRALLLKPRRNIIN
        R Y A A AASQ VAS  AA    AR GG++KKEE  R + E  AW+PDPVTG+YRPEN ++ ID  DLRA+LLKP+RN++N
Subjt:  REYSAAAAAASQGVASSAAAGRFPARGGGVMKKEEAVRSSREKVAWVPDPVTGFYRPENCSDEIDAADLRALLLKPRRNIIN

A0A6J1J9I8 protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like3.3e-1360.26Show/hide
Query:  REYSAAAAAASQGVASSAAAGRFPARGGGVMKKEEAVRSSREKVAWVPDPVTGFYRPENCSDEIDAADLRALLLKPRR
        R Y+A A AASQ            AR  G+MKKEE    SREKVAWVPDPVTG+YRPEN SDEIDA DLRA+++  RR
Subjt:  REYSAAAAAASQGVASSAAAGRFPARGGGVMKKEEAVRSSREKVAWVPDPVTGFYRPENCSDEIDAADLRALLLKPRR

SwissProt top hitse value%identityAlignment
P32292 Indole-3-acetic acid-induced protein ARG24.0e-0851.95Show/hide
Query:  AAAAAASQGVASSAAAGRFPARGGGVMKK--EEAVRSSREKVAWVPDPVTGFYRPENCSDEIDAADLRALLLKPRRN
        AAAAAA+Q      A     + GG ++ K  EE VR   EKV+WVPDPVTG+YRPEN ++EID AD+RA +L  + N
Subjt:  AAAAAASQGVASSAAAGRFPARGGGVMKK--EEAVRSSREKVAWVPDPVTGFYRPENCSDEIDAADLRALLLKPRRN

P46521 Late embryogenesis abundant protein Lea5-A2.0e-0744.87Show/hide
Query:  REYSAA-AAAASQGVASSAAAGRFPARGGGVMKKEEAVRSSREKVAWVPDPVTGFYRPENCSDEIDAADLRALLLKPR
        R YS A  AA +       A G+   R    MK+  +  +     AW PDPVTG+YRPENC  EIDAADLR ++L  R
Subjt:  REYSAA-AAAASQGVASSAAAGRFPARGGGVMKKEEAVRSSREKVAWVPDPVTGFYRPENCSDEIDAADLRALLLKPR

P46522 Late embryogenesis abundant protein Lea5-D2.0e-0744.87Show/hide
Query:  REYSAA-AAAASQGVASSAAAGRFPARGGGVMKKEEAVRSSREKVAWVPDPVTGFYRPENCSDEIDAADLRALLLKPR
        R YS A  AA +       A G+   R    MK+  +  +     AW PDPVTG+YRPENC  EIDAA+LR +LL  R
Subjt:  REYSAA-AAAASQGVASSAAAGRFPARGGGVMKKEEAVRSSREKVAWVPDPVTGFYRPENCSDEIDAADLRALLLKPR

Q93WF6 Protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial3.3e-1054.17Show/hide
Query:  AAAASQGVASSAAAGRFPARGGGVMKKEEAVRSSREKVAWVPDPVTGFYRPENCSDEIDAADLRALLLKPRR
        AA A+QG  SS   GR  A    VMKK + V  S +K++WVPDP TG+YRPE  S+EIDAA+LRA LL  ++
Subjt:  AAAASQGVASSAAAGRFPARGGGVMKKEEAVRSSREKVAWVPDPVTGFYRPENCSDEIDAADLRALLLKPRR

Q9SRX6 Late embryogenis abundant protein 21.2e-0743.59Show/hide
Query:  REYSAAAAAASQGVASSAAAGRFPARGGGVMKKEEAVRSSREKVAWVPDPVTGFYRPENCSDEIDAADLRALLLKPRR
        R ++AAA  A  G  S+A              K+ A  +S EK  WVPDP TG+YRPE  S+EID A+LRA+LL  ++
Subjt:  REYSAAAAAASQGVASSAAAGRFPARGGGVMKKEEAVRSSREKVAWVPDPVTGFYRPENCSDEIDAADLRALLLKPRR

Arabidopsis top hitse value%identityAlignment
AT1G02820.1 Late embryogenesis abundant 3 (LEA3) family protein8.3e-0943.59Show/hide
Query:  REYSAAAAAASQGVASSAAAGRFPARGGGVMKKEEAVRSSREKVAWVPDPVTGFYRPENCSDEIDAADLRALLLKPRR
        R ++AAA  A  G  S+A              K+ A  +S EK  WVPDP TG+YRPE  S+EID A+LRA+LL  ++
Subjt:  REYSAAAAAASQGVASSAAAGRFPARGGGVMKKEEAVRSSREKVAWVPDPVTGFYRPENCSDEIDAADLRALLLKPRR

AT3G53770.1 late embryogenesis abundant 3 (LEA3) family protein1.5e-0554.84Show/hide
Query:  EKVAWVPDPVTGFYRPENCSDEIDAADLRAL
        E++ W+PDP TG+YRP+N + E+DA +LR+L
Subjt:  EKVAWVPDPVTGFYRPENCSDEIDAADLRAL

AT3G53770.2 late embryogenesis abundant 3 (LEA3) family protein1.5e-0554.84Show/hide
Query:  EKVAWVPDPVTGFYRPENCSDEIDAADLRAL
        E++ W+PDP TG+YRP+N + E+DA +LR+L
Subjt:  EKVAWVPDPVTGFYRPENCSDEIDAADLRAL

AT4G02380.1 senescence-associated gene 212.3e-1154.17Show/hide
Query:  AAAASQGVASSAAAGRFPARGGGVMKKEEAVRSSREKVAWVPDPVTGFYRPENCSDEIDAADLRALLLKPRR
        AA A+QG  SS   GR  A    VMKK + V  S +K++WVPDP TG+YRPE  S+EIDAA+LRA LL  ++
Subjt:  AAAASQGVASSAAAGRFPARGGGVMKKEEAVRSSREKVAWVPDPVTGFYRPENCSDEIDAADLRALLLKPRR

AT4G02380.2 senescence-associated gene 212.3e-1154.17Show/hide
Query:  AAAASQGVASSAAAGRFPARGGGVMKKEEAVRSSREKVAWVPDPVTGFYRPENCSDEIDAADLRALLLKPRR
        AA A+QG  SS   GR  A    VMKK + V  S +K++WVPDP TG+YRPE  S+EIDAA+LRA LL  ++
Subjt:  AAAASQGVASSAAAGRFPARGGGVMKKEEAVRSSREKVAWVPDPVTGFYRPENCSDEIDAADLRALLLKPRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CGTGAATATTCAGCGGCGGCGGCGGCGGCGTCACAAGGAGTGGCGTCCAGCGCGGCGGCGGGAAGATTTCCGGCAAGAGGCGGCGGCGTGATGAAGAAGGAAGAAGCAGT
AAGAAGTAGTAGAGAGAAGGTGGCGTGGGTCCCTGACCCGGTCACCGGCTTCTACCGGCCGGAGAACTGCTCCGACGAGATAGATGCCGCCGACCTCCGGGCTTTGCTCC
TCAAGCCCAGAAGAAACATAATCAAT
mRNA sequenceShow/hide mRNA sequence
CGTGAATATTCAGCGGCGGCGGCGGCGGCGTCACAAGGAGTGGCGTCCAGCGCGGCGGCGGGAAGATTTCCGGCAAGAGGCGGCGGCGTGATGAAGAAGGAAGAAGCAGT
AAGAAGTAGTAGAGAGAAGGTGGCGTGGGTCCCTGACCCGGTCACCGGCTTCTACCGGCCGGAGAACTGCTCCGACGAGATAGATGCCGCCGACCTCCGGGCTTTGCTCC
TCAAGCCCAGAAGAAACATAATCAAT
Protein sequenceShow/hide protein sequence
REYSAAAAAASQGVASSAAAGRFPARGGGVMKKEEAVRSSREKVAWVPDPVTGFYRPENCSDEIDAADLRALLLKPRRNIIN