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MS019042 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019042
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein RBL
Genome locationscaffold20:925108..925218
RNA-Seq ExpressionMS019042
SyntenyMS019042
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601247.1 Protein RBL, partial [Cucurbita argyrosperma subsp. sororia]8.9e-0580.65Show/hide
Query:  DPLGGDFPKV-GEFLKHGVMKCIAFNRRGTI
        DPL GDFP+V  EFL+HGVMKCIAFNRRGT+
Subjt:  DPLGGDFPKV-GEFLKHGVMKCIAFNRRGTI
KZV47305.1 retinoblastoma-binding protein 5 [Dorcoceras hygrometricum]5.2e-0575.76Show/hide
Query:  FQDPLGGDFPKV-GEFLKHGVMKCIAFNRRGTI
        F DPL GDFP+V  E+L+HGVMKCIAFNRRGT+
Subjt:  FQDPLGGDFPKV-GEFLKHGVMKCIAFNRRGTI
OVA01004.1 WD40 repeat [Macleaya cordata]8.9e-0580.65Show/hide
Query:  DPLGGDFPKV-GEFLKHGVMKCIAFNRRGTI
        DPL GDFP+V  EFL+HGVMKCIAFNRRGT+
Subjt:  DPLGGDFPKV-GEFLKHGVMKCIAFNRRGTI
XP_010277147.1 PREDICTED: protein RBL-like [Nelumbo nucifera]8.9e-0580.65Show/hide
Query:  DPLGGDFPKV-GEFLKHGVMKCIAFNRRGTI
        DPL GDFP+V  EFL+HGVMKCIAFNRRGT+
Subjt:  DPLGGDFPKV-GEFLKHGVMKCIAFNRRGTI
XP_022150682.1 protein RBL [Momordica charantia]8.9e-0580.65Show/hide
Query:  DPLGGDFPKV-GEFLKHGVMKCIAFNRRGTI
        DPL GDFP+V  EFL+HGVMKCIAFNRRGT+
Subjt:  DPLGGDFPKV-GEFLKHGVMKCIAFNRRGTI
TrEMBL top hitse value%identityAlignment
A0A2Z7CLT8 Retinoblastoma-binding protein 52.5e-0575.76Show/hide
Query:  FQDPLGGDFPKV-GEFLKHGVMKCIAFNRRGTI
        F DPL GDFP+V  E+L+HGVMKCIAFNRRGT+
Subjt:  FQDPLGGDFPKV-GEFLKHGVMKCIAFNRRGTI
A0A5D3CD07 Protein RBL4.3e-0580.65Show/hide
Query:  DPLGGDFPKV-GEFLKHGVMKCIAFNRRGTI
        DPL GDFP+V  EFL+HGVMKCIAFNRRGT+
Subjt:  DPLGGDFPKV-GEFLKHGVMKCIAFNRRGTI
A0A6J1HSX2 protein RBL-like isoform X14.3e-0580.65Show/hide
Query:  DPLGGDFPKV-GEFLKHGVMKCIAFNRRGTI
        DPL GDFP+V  EFL+HGVMKCIAFNRRGT+
Subjt:  DPLGGDFPKV-GEFLKHGVMKCIAFNRRGTI
A0A6J1HX91 protein RBL-like isoform X24.3e-0580.65Show/hide
Query:  DPLGGDFPKV-GEFLKHGVMKCIAFNRRGTI
        DPL GDFP+V  EFL+HGVMKCIAFNRRGT+
Subjt:  DPLGGDFPKV-GEFLKHGVMKCIAFNRRGTI
A0A6P6TUH4 protein RBL-like4.3e-0580.65Show/hide
Query:  DPLGGDFPKV-GEFLKHGVMKCIAFNRRGTI
        DPL GDFP+V  EFL+HGVMKCIAFNRRGT+
Subjt:  DPLGGDFPKV-GEFLKHGVMKCIAFNRRGTI
SwissProt top hitse value%identityAlignment
Q5E915 Protein RBL1.1e-0564.52Show/hide
Query:  DPLGGDFPKV-GEFLKHGVMKCIAFNRRGTI
        DPL GDFP+V  E+L+HGV+KC+AFN RG++
Subjt:  DPLGGDFPKV-GEFLKHGVMKCIAFNRRGTI
Arabidopsis top hitse value%identityAlignment
AT3G21060.1 Transducin/WD40 repeat-like superfamily protein7.8e-0764.52Show/hide
Query:  DPLGGDFPKV-GEFLKHGVMKCIAFNRRGTI
        DPL GDFP+V  E+L+HGV+KC+AFN RG++
Subjt:  DPLGGDFPKV-GEFLKHGVMKCIAFNRRGTI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTATCTTCTCTTATTTTCCAAGATCCTCTGGGGGGAGACTTTCCAAAAGTTGGGGAGTTTCTGAAACATGGAGTGATGAAATGCATCGCCTTTAATCGTCGTGGTACCAT
T
mRNA sequenceShow/hide mRNA sequence
TTATCTTCTCTTATTTTCCAAGATCCTCTGGGGGGAGACTTTCCAAAAGTTGGGGAGTTTCTGAAACATGGAGTGATGAAATGCATCGCCTTTAATCGTCGTGGTACCAT
T
Protein sequenceShow/hide protein sequence
LSSLIFQDPLGGDFPKVGEFLKHGVMKCIAFNRRGTI