CuGenDBv2

Gene ID	MS019046
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like
Genome location	scaffold20:942080..945751
RNA-Seq Expression	MS019046
Synteny	MS019046
Gene Ontology terms	GO:0032981 - mitochondrial respiratory chain complex I assembly (biological process) GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domains	IPR019342 - NADH:ubiquinone oxidoreductase, iron-sulphur subunit 5

Homology

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GenBank top hits

e value

%identity

Alignment

XP_011652934.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B [Cucumis sativus]

1.9e-39

96.39

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Query:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAEREAKEGKHVDAAHA
        MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDC+LLREDYLECLHH KEFQRRNR+YKEEQRKLRAAEREAKEGKHVDAAHA
Subjt:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAEREAKEGKHVDAAHA

XP_022155272.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like [Momordica charantia]

1.3e-40

100

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Query:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAEREAKEGKHVDAAHA
        MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAEREAKEGKHVDAAHA
Subjt:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAEREAKEGKHVDAAHA

XP_022948762.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like [Cucurbita moschata]

3.3e-39

96.39

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Query:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAEREAKEGKHVDAAHA
        MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNR+YKEEQRKLRAA+ EAKEGKHVDAAHA
Subjt:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAEREAKEGKHVDAAHA

XP_023521877.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like [Cucurbita pepo subsp. pepo]

9.5e-39

95.18

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Query:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAEREAKEGKHVDAAHA
        MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNR+YKEEQRKLR A+ EAKEGKHVDAAHA
Subjt:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAEREAKEGKHVDAAHA

XP_038905985.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B [Benincasa hispida]

3.0e-40

98.8

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Query:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAEREAKEGKHVDAAHA
        MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAER+AKEGKHVDAAHA
Subjt:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAEREAKEGKHVDAAHA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KTA7 Fiber protein Fb14

9.3e-40

96.39

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Query:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAEREAKEGKHVDAAHA
        MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDC+LLREDYLECLHH KEFQRRNR+YKEEQRKLRAAEREAKEGKHVDAAHA
Subjt:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAEREAKEGKHVDAAHA

A0A6J1DNW8 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like

6.4e-41

100

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Query:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAEREAKEGKHVDAAHA
        MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAEREAKEGKHVDAAHA
Subjt:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAEREAKEGKHVDAAHA

A0A6J1F476 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like

1.7e-38

93.98

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Query:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAEREAKEGKHVDAAHA
        MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDC LLREDYLECLHHSKEFQRRNR+YKEE+RKLRAAEREAKEGK V+AAHA
Subjt:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAEREAKEGKHVDAAHA

A0A6J1GA50 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like

1.6e-39

96.39

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Query:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAEREAKEGKHVDAAHA
        MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNR+YKEEQRKLRAA+ EAKEGKHVDAAHA
Subjt:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAEREAKEGKHVDAAHA

A0A6J1KEK7 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like

1.6e-39

96.39

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Query:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAEREAKEGKHVDAAHA
        MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNR+YKEEQRKLRAA+ EAKEGKHVDAAHA
Subjt:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAEREAKEGKHVDAAHA

SwissProt top hits

e value

%identity

Alignment

O82238 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-A

3.3e-34

86.25

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Query:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAER---EAKEGKH
        MASGWGITGNKGRCYDFW+DFS+CMS CREPKDC LLREDYLECLHHSKEFQRRNRIYKEEQRKLRAA R   EA +G H
Subjt:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAER---EAKEGKH

Q9LZI6 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B

2.5e-34

89.19

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Query:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAEREAKE
        MASGWGITGNKGRCYDFW+DFS+CMS CREPKDC LLREDYLECLHHSKEFQRRNRIYKEEQRKLRAA R+ +E
Subjt:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAEREAKE

Arabidopsis top hits

e value

%identity

Alignment

AT2G47690.1 NADH-ubiquinone oxidoreductase-related

2.3e-35

86.25

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Query:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAER---EAKEGKH
        MASGWGITGNKGRCYDFW+DFS+CMS CREPKDC LLREDYLECLHHSKEFQRRNRIYKEEQRKLRAA R   EA +G H
Subjt:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAER---EAKEGKH

AT2G47690.2 NADH-ubiquinone oxidoreductase-related

2.9e-25

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Query:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKE
        MASGWGITGNKGRCYDFW+DFS+CMS CREPKDC LLREDYLECLHHSKE
Subjt:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKE

AT3G62790.1 NADH-ubiquinone oxidoreductase-related

1.8e-35

89.19

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Query:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAEREAKE
        MASGWGITGNKGRCYDFW+DFS+CMS CREPKDC LLREDYLECLHHSKEFQRRNRIYKEEQRKLRAA R+ +E
Subjt:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAEREAKE

Sequences

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CDS sequence

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ATGGCGTCAGGGTGGGGAATCACCGGAAACAAGGGCCGATGCTACGATTTCTGGATTGATTTCAGCGATTGTATGTCCCGCTGCCGAGAACCCAAGGACTGTGCTCTACT
CCGCGAAGATTACCTCGAGTGCCTCCACCATTCCAAGGAGTTCCAAAGAAGAAACCGAATTTATAAGGAGGAGCAGCGTAAACTAAGAGCAGCCGAACGGGAGGCCAAAG
AGGGTAAACATGTCGATGCTGCTCATGCA

mRNA sequence

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Protein sequence

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MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAEREAKEGKHVDAAHA

MS019046 (gene) of Bitter gourd (TR) v1 genome