CuGenDBv2

Gene ID	MS019047
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	phytochrome A-associated F-box protein
Genome location	scaffold20:950084..951070
RNA-Seq Expression	MS019047
Synteny	MS019047
Gene Ontology terms	GO:0009585 - red, far-red light phototransduction (biological process) GO:0010099 - regulation of photomorphogenesis (biological process) GO:0048366 - leaf development (biological process) GO:0048573 - photoperiodism, flowering (biological process) GO:0005634 - nucleus (cellular component) GO:0005515 - protein binding (molecular function)
InterPro domains	IPR001810 - F-box domain IPR036047 - F-box-like domain superfamily IPR040267 - F-box protein EID1-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0044375.1 phytochrome A-associated F-box protein [Cucumis melo var. makuwa]

3.6e-174

87.69

Show/hide

Query:  MAESAFSNLPEDVLLNIFFKLEDDPRNWARLACVSTKFSSTVRNVCWKTKCSTAIPSLLADLVVGDSVPAGGWASLHKLAVCCPGLLHSGVLLENSDFGL
        MA S FS LPED+LLNIFFKLEDDPRNWARLACVSTKFSST+RN+CWKTKCS AIPSL++DL+VGDS+PAGGWASLHKLAVCCPGL+HSGVLLENSDFGL
Subjt:  MAESAFSNLPEDVLLNIFFKLEDDPRNWARLACVSTKFSSTVRNVCWKTKCSTAIPSLLADLVVGDSVPAGGWASLHKLAVCCPGLLHSGVLLENSDFGL

Query:  ERELGPDENYLELAPSQHPKPDTGTDTDTQ-FQVNSDFSASAS---SDCAWSLYDDLYLDTVYNDSEAPDVPDPQIGATKVEKGVFMADREFSASKRRKI
        ERELGPDENY++L  SQH +P++   + T  F+VNSD SASAS   SDCAWSLYDDLYLDT+YNDSEAPDV DPQIG+TKVEKGVFMADREF  SKRRKI
Subjt:  ERELGPDENYLELAPSQHPKPDTGTDTDTQ-FQVNSDFSASAS---SDCAWSLYDDLYLDTVYNDSEAPDVPDPQIGATKVEKGVFMADREFSASKRRKI

Query:  YRSMRSHLASGVWNLSREQGNKLLRSRFRGDCLYICDWPGCVHIEEKRNYMLFRGIFKNFKASHVWRTIKDGNRNKIDLNCAFCSCQETWDLHSAFCLRR
         RSMRSHLASGVWNLSREQGNKLLRSRFRGD LYICDWPGCVHIEEKRNYMLFRGIFKNFK SHVWRTIKDGNRNKIDLNCAFCSC+ETWDLHSAFCLRR
Subjt:  YRSMRSHLASGVWNLSREQGNKLLRSRFRGDCLYICDWPGCVHIEEKRNYMLFRGIFKNFKASHVWRTIKDGNRNKIDLNCAFCSCQETWDLHSAFCLRR

Query:  VFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
        VFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
Subjt:  VFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT

XP_011652932.1 phytochrome A-associated F-box protein [Cucumis sativus]

2.3e-173

85.93

Show/hide

Query:  MAESAFSNLPEDVLLNIFFKLEDDPRNWARLACVSTKFSSTVRNVCWKTKCSTAIPSLLADLVVGDSVPAGGWASLHKLAVCCPGLLHSGVLLENSDFGL
        MA+S FS LP+D+LLNIFFKLEDDPRNWARLACVSTKFS T+RN+CWKTKCS AIPSL++DL+VGDS+PAGGWASLHKLAVCCPGL+HSGVLLENSDFGL
Subjt:  MAESAFSNLPEDVLLNIFFKLEDDPRNWARLACVSTKFSSTVRNVCWKTKCSTAIPSLLADLVVGDSVPAGGWASLHKLAVCCPGLLHSGVLLENSDFGL

Query:  ERELGPDENYLELAPSQHPKPDTGTDTDTQFQVNSDFSASAS-----SDCAWSLYDDLYLDTVYNDSEAPDVPDPQIGATKVEKGVFMADREFSASKRRK
        ERELGPDENY++L  SQ+ +P++   +   F+VNSD SASAS     SDCAWSLYDDLYLDT+YNDSEAPDV DPQIG+TKVEKGVFM DREF  SKRRK
Subjt:  ERELGPDENYLELAPSQHPKPDTGTDTDTQFQVNSDFSASAS-----SDCAWSLYDDLYLDTVYNDSEAPDVPDPQIGATKVEKGVFMADREFSASKRRK

Query:  IYRSMRSHLASGVWNLSREQGNKLLRSRFRGDCLYICDWPGCVHIEEKRNYMLFRGIFKNFKASHVWRTIKDGNRNKIDLNCAFCSCQETWDLHSAFCLR
        I RSMRSHLASGVWNLSREQGNKLLRSRFRGD LYICDWPGCVHIEEKRNYMLFRGIFKNFK SHVWRTIKDGNRNKIDLNCAFCSC+ETWDLHSAFCLR
Subjt:  IYRSMRSHLASGVWNLSREQGNKLLRSRFRGDCLYICDWPGCVHIEEKRNYMLFRGIFKNFKASHVWRTIKDGNRNKIDLNCAFCSCQETWDLHSAFCLR

Query:  RVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
        RVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
Subjt:  RVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT

XP_016901491.1 PREDICTED: phytochrome A-associated F-box protein [Cucumis melo]

1.2e-174

87.69

Show/hide

Query:  MAESAFSNLPEDVLLNIFFKLEDDPRNWARLACVSTKFSSTVRNVCWKTKCSTAIPSLLADLVVGDSVPAGGWASLHKLAVCCPGLLHSGVLLENSDFGL
        MA+S FS LPED+LLNIFFKLEDDPRNWARLACVSTKFSST+RN+CWKTKCS AIPSL++DL+VGDS+PAGGWASLHKLAVCCPGL+HSGVLLENSDFGL
Subjt:  MAESAFSNLPEDVLLNIFFKLEDDPRNWARLACVSTKFSSTVRNVCWKTKCSTAIPSLLADLVVGDSVPAGGWASLHKLAVCCPGLLHSGVLLENSDFGL

Query:  ERELGPDENYLELAPSQHPKPDTGTDTDTQ-FQVNSDFSASAS---SDCAWSLYDDLYLDTVYNDSEAPDVPDPQIGATKVEKGVFMADREFSASKRRKI
        ERELGPDENY++L  SQH +P++   + T  F+VNSD SASAS   SDCAWSLYDDLYLDT+YNDSEAPDV DPQIG+TKVEKGVFMADREF  SKRRKI
Subjt:  ERELGPDENYLELAPSQHPKPDTGTDTDTQ-FQVNSDFSASAS---SDCAWSLYDDLYLDTVYNDSEAPDVPDPQIGATKVEKGVFMADREFSASKRRKI

Query:  YRSMRSHLASGVWNLSREQGNKLLRSRFRGDCLYICDWPGCVHIEEKRNYMLFRGIFKNFKASHVWRTIKDGNRNKIDLNCAFCSCQETWDLHSAFCLRR
         RSMRSHLASGVWNLSREQGNKLLRSRFRGD LYICDWPGCVHIEEKRNYMLFRGIFKNFK SHVWRTIKDGNRNKIDLNCAFCSC+ETWDLHSAFCLRR
Subjt:  YRSMRSHLASGVWNLSREQGNKLLRSRFRGDCLYICDWPGCVHIEEKRNYMLFRGIFKNFKASHVWRTIKDGNRNKIDLNCAFCSCQETWDLHSAFCLRR

Query:  VFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
        VFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
Subjt:  VFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT

XP_022155270.1 phytochrome A-associated F-box protein isoform X1 [Momordica charantia]

2.0e-193

98.78

Show/hide

Query:  MAESAFSNLPEDVLLNIFFKLEDDPRNWARLACVSTKFSSTVRNVCWKTKCSTAIPSLLADLVVGDSVPAGGWASLHKLAVCCPGLLHSGVLLENSDFGL
        MAESAFSNLPEDVLLNIFFKLEDDPRNWARLACVSTKFSSTVRNVCWKTKCSTAIPSLLADLVVGDSVPAGGWASLHKLAVCCPGLLHSGVLLENSDFGL
Subjt:  MAESAFSNLPEDVLLNIFFKLEDDPRNWARLACVSTKFSSTVRNVCWKTKCSTAIPSLLADLVVGDSVPAGGWASLHKLAVCCPGLLHSGVLLENSDFGL

Query:  ERELGPDENYLELAPSQHPKPDTGTDTDTQFQVNSDFSASASSDCAWSLYDDLYLDTVYNDSEAPDVPDPQIGATKVEKGVFMADREFSASKRRKIYRSM
        ERELGPDENYLELAPSQHPKP    DTDTQFQVNSDFSASASSDCAWSLYDDLYLDTVYNDSEAPDVPDPQIGATKVEKGVFMADREFSASKRRKIYRSM
Subjt:  ERELGPDENYLELAPSQHPKPDTGTDTDTQFQVNSDFSASASSDCAWSLYDDLYLDTVYNDSEAPDVPDPQIGATKVEKGVFMADREFSASKRRKIYRSM

Query:  RSHLASGVWNLSREQGNKLLRSRFRGDCLYICDWPGCVHIEEKRNYMLFRGIFKNFKASHVWRTIKDGNRNKIDLNCAFCSCQETWDLHSAFCLRRVFGY
        RSHLASGVWNLSREQGNKLLRSRFRGDCLYICDWPGCVHIEEKRNYMLFRGIFKNFKASHVWRTIKDGNRNKIDLNCAFCSCQETWDLHSAFCLRRVFGY
Subjt:  RSHLASGVWNLSREQGNKLLRSRFRGDCLYICDWPGCVHIEEKRNYMLFRGIFKNFKASHVWRTIKDGNRNKIDLNCAFCSCQETWDLHSAFCLRRVFGY

Query:  HDDGEPVVRAYVCENGHVSGAWTDLPLYT
        HDDGEPVVRAYVCENGHVSGAWTDLPLYT
Subjt:  HDDGEPVVRAYVCENGHVSGAWTDLPLYT

XP_022155271.1 phytochrome A-associated F-box protein isoform X2 [Momordica charantia]

1.5e-191

98.77

Show/hide

Query:  MAESAFSNLPEDVLLNIFFKLEDDPRNWARLACVSTKFSSTVRNVCWKTKCSTAIPSLLADLVVGDSVPAGGWASLHKLAVCCPGLLHSGVLLENSDFGL
        MAESAFSNLPEDVLLNIFFKLEDDPRNWARLACVSTKFSSTVRNVCWKTKCSTAIPSLLADLVVGDSVPAGGWASLHKLAVCCPGLLHSGVLLENSDFGL
Subjt:  MAESAFSNLPEDVLLNIFFKLEDDPRNWARLACVSTKFSSTVRNVCWKTKCSTAIPSLLADLVVGDSVPAGGWASLHKLAVCCPGLLHSGVLLENSDFGL

Query:  ERELGPDENYLELAPSQHPKPDTGTDTDTQFQVNSDFSASASSDCAWSLYDDLYLDTVYNDSEAPDVPDPQIGATKVEKGVFMADREFSASKRRKIYRSM
        ERELGPDENYLELAPSQHPKP    DTDTQFQVNSDFSASASSDCAWSLYDDLYLDTVYNDSEAPDVPDPQIGATKVEKGVFMADREFSASKRRKIYRSM
Subjt:  ERELGPDENYLELAPSQHPKPDTGTDTDTQFQVNSDFSASASSDCAWSLYDDLYLDTVYNDSEAPDVPDPQIGATKVEKGVFMADREFSASKRRKIYRSM

Query:  RSHLASGVWNLSREQGNKLLRSRFRGDCLYICDWPGCVHIEEKRNYMLFRGIFKNFKASHVWRTIKDGNRNKIDLNCAFCSCQETWDLHSAFCLRRVFGY
        RSHLASGVWNLSREQGNKLLRSRFRGDCLYICDWPGCVHIEEKRNYMLFRGIFKNFKASHVWRTIKDGNRNKIDLNCAFCSCQETWDLHSAFCLRRVFGY
Subjt:  RSHLASGVWNLSREQGNKLLRSRFRGDCLYICDWPGCVHIEEKRNYMLFRGIFKNFKASHVWRTIKDGNRNKIDLNCAFCSCQETWDLHSAFCLRRVFGY

Query:  HDDGEPVVRAYVCENGHVSGAWTDLP
        HDDGEPVVRAYVCENGHVSGAWTDLP
Subjt:  HDDGEPVVRAYVCENGHVSGAWTDLP

TrEMBL top hits

e value

%identity

Alignment

A0A1S4DZU2 phytochrome A-associated F-box protein

6.0e-175

87.69

Show/hide

Query:  MAESAFSNLPEDVLLNIFFKLEDDPRNWARLACVSTKFSSTVRNVCWKTKCSTAIPSLLADLVVGDSVPAGGWASLHKLAVCCPGLLHSGVLLENSDFGL
        MA+S FS LPED+LLNIFFKLEDDPRNWARLACVSTKFSST+RN+CWKTKCS AIPSL++DL+VGDS+PAGGWASLHKLAVCCPGL+HSGVLLENSDFGL
Subjt:  MAESAFSNLPEDVLLNIFFKLEDDPRNWARLACVSTKFSSTVRNVCWKTKCSTAIPSLLADLVVGDSVPAGGWASLHKLAVCCPGLLHSGVLLENSDFGL

Query:  ERELGPDENYLELAPSQHPKPDTGTDTDTQ-FQVNSDFSASAS---SDCAWSLYDDLYLDTVYNDSEAPDVPDPQIGATKVEKGVFMADREFSASKRRKI
        ERELGPDENY++L  SQH +P++   + T  F+VNSD SASAS   SDCAWSLYDDLYLDT+YNDSEAPDV DPQIG+TKVEKGVFMADREF  SKRRKI
Subjt:  ERELGPDENYLELAPSQHPKPDTGTDTDTQ-FQVNSDFSASAS---SDCAWSLYDDLYLDTVYNDSEAPDVPDPQIGATKVEKGVFMADREFSASKRRKI

Query:  YRSMRSHLASGVWNLSREQGNKLLRSRFRGDCLYICDWPGCVHIEEKRNYMLFRGIFKNFKASHVWRTIKDGNRNKIDLNCAFCSCQETWDLHSAFCLRR
         RSMRSHLASGVWNLSREQGNKLLRSRFRGD LYICDWPGCVHIEEKRNYMLFRGIFKNFK SHVWRTIKDGNRNKIDLNCAFCSC+ETWDLHSAFCLRR
Subjt:  YRSMRSHLASGVWNLSREQGNKLLRSRFRGDCLYICDWPGCVHIEEKRNYMLFRGIFKNFKASHVWRTIKDGNRNKIDLNCAFCSCQETWDLHSAFCLRR

Query:  VFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
        VFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
Subjt:  VFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT

A0A5A7TSM0 Phytochrome A-associated F-box protein

1.8e-174

87.69

Show/hide

Query:  MAESAFSNLPEDVLLNIFFKLEDDPRNWARLACVSTKFSSTVRNVCWKTKCSTAIPSLLADLVVGDSVPAGGWASLHKLAVCCPGLLHSGVLLENSDFGL
        MA S FS LPED+LLNIFFKLEDDPRNWARLACVSTKFSST+RN+CWKTKCS AIPSL++DL+VGDS+PAGGWASLHKLAVCCPGL+HSGVLLENSDFGL
Subjt:  MAESAFSNLPEDVLLNIFFKLEDDPRNWARLACVSTKFSSTVRNVCWKTKCSTAIPSLLADLVVGDSVPAGGWASLHKLAVCCPGLLHSGVLLENSDFGL

Query:  ERELGPDENYLELAPSQHPKPDTGTDTDTQ-FQVNSDFSASAS---SDCAWSLYDDLYLDTVYNDSEAPDVPDPQIGATKVEKGVFMADREFSASKRRKI
        ERELGPDENY++L  SQH +P++   + T  F+VNSD SASAS   SDCAWSLYDDLYLDT+YNDSEAPDV DPQIG+TKVEKGVFMADREF  SKRRKI
Subjt:  ERELGPDENYLELAPSQHPKPDTGTDTDTQ-FQVNSDFSASAS---SDCAWSLYDDLYLDTVYNDSEAPDVPDPQIGATKVEKGVFMADREFSASKRRKI

Query:  YRSMRSHLASGVWNLSREQGNKLLRSRFRGDCLYICDWPGCVHIEEKRNYMLFRGIFKNFKASHVWRTIKDGNRNKIDLNCAFCSCQETWDLHSAFCLRR
         RSMRSHLASGVWNLSREQGNKLLRSRFRGD LYICDWPGCVHIEEKRNYMLFRGIFKNFK SHVWRTIKDGNRNKIDLNCAFCSC+ETWDLHSAFCLRR
Subjt:  YRSMRSHLASGVWNLSREQGNKLLRSRFRGDCLYICDWPGCVHIEEKRNYMLFRGIFKNFKASHVWRTIKDGNRNKIDLNCAFCSCQETWDLHSAFCLRR

Query:  VFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
        VFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
Subjt:  VFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT

A0A5D3E0Q4 Phytochrome A-associated F-box protein

6.0e-175

87.69

Show/hide

Query:  MAESAFSNLPEDVLLNIFFKLEDDPRNWARLACVSTKFSSTVRNVCWKTKCSTAIPSLLADLVVGDSVPAGGWASLHKLAVCCPGLLHSGVLLENSDFGL
        MA+S FS LPED+LLNIFFKLEDDPRNWARLACVSTKFSST+RN+CWKTKCS AIPSL++DL+VGDS+PAGGWASLHKLAVCCPGL+HSGVLLENSDFGL
Subjt:  MAESAFSNLPEDVLLNIFFKLEDDPRNWARLACVSTKFSSTVRNVCWKTKCSTAIPSLLADLVVGDSVPAGGWASLHKLAVCCPGLLHSGVLLENSDFGL

Query:  ERELGPDENYLELAPSQHPKPDTGTDTDTQ-FQVNSDFSASAS---SDCAWSLYDDLYLDTVYNDSEAPDVPDPQIGATKVEKGVFMADREFSASKRRKI
        ERELGPDENY++L  SQH +P++   + T  F+VNSD SASAS   SDCAWSLYDDLYLDT+YNDSEAPDV DPQIG+TKVEKGVFMADREF  SKRRKI
Subjt:  ERELGPDENYLELAPSQHPKPDTGTDTDTQ-FQVNSDFSASAS---SDCAWSLYDDLYLDTVYNDSEAPDVPDPQIGATKVEKGVFMADREFSASKRRKI

Query:  YRSMRSHLASGVWNLSREQGNKLLRSRFRGDCLYICDWPGCVHIEEKRNYMLFRGIFKNFKASHVWRTIKDGNRNKIDLNCAFCSCQETWDLHSAFCLRR
         RSMRSHLASGVWNLSREQGNKLLRSRFRGD LYICDWPGCVHIEEKRNYMLFRGIFKNFK SHVWRTIKDGNRNKIDLNCAFCSC+ETWDLHSAFCLRR
Subjt:  YRSMRSHLASGVWNLSREQGNKLLRSRFRGDCLYICDWPGCVHIEEKRNYMLFRGIFKNFKASHVWRTIKDGNRNKIDLNCAFCSCQETWDLHSAFCLRR

Query:  VFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
        VFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
Subjt:  VFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT

A0A6J1DLZ5 phytochrome A-associated F-box protein isoform X1

9.9e-194

98.78

Show/hide

Query:  MAESAFSNLPEDVLLNIFFKLEDDPRNWARLACVSTKFSSTVRNVCWKTKCSTAIPSLLADLVVGDSVPAGGWASLHKLAVCCPGLLHSGVLLENSDFGL
        MAESAFSNLPEDVLLNIFFKLEDDPRNWARLACVSTKFSSTVRNVCWKTKCSTAIPSLLADLVVGDSVPAGGWASLHKLAVCCPGLLHSGVLLENSDFGL
Subjt:  MAESAFSNLPEDVLLNIFFKLEDDPRNWARLACVSTKFSSTVRNVCWKTKCSTAIPSLLADLVVGDSVPAGGWASLHKLAVCCPGLLHSGVLLENSDFGL

Query:  ERELGPDENYLELAPSQHPKPDTGTDTDTQFQVNSDFSASASSDCAWSLYDDLYLDTVYNDSEAPDVPDPQIGATKVEKGVFMADREFSASKRRKIYRSM
        ERELGPDENYLELAPSQHPKP    DTDTQFQVNSDFSASASSDCAWSLYDDLYLDTVYNDSEAPDVPDPQIGATKVEKGVFMADREFSASKRRKIYRSM
Subjt:  ERELGPDENYLELAPSQHPKPDTGTDTDTQFQVNSDFSASASSDCAWSLYDDLYLDTVYNDSEAPDVPDPQIGATKVEKGVFMADREFSASKRRKIYRSM

Query:  RSHLASGVWNLSREQGNKLLRSRFRGDCLYICDWPGCVHIEEKRNYMLFRGIFKNFKASHVWRTIKDGNRNKIDLNCAFCSCQETWDLHSAFCLRRVFGY
        RSHLASGVWNLSREQGNKLLRSRFRGDCLYICDWPGCVHIEEKRNYMLFRGIFKNFKASHVWRTIKDGNRNKIDLNCAFCSCQETWDLHSAFCLRRVFGY
Subjt:  RSHLASGVWNLSREQGNKLLRSRFRGDCLYICDWPGCVHIEEKRNYMLFRGIFKNFKASHVWRTIKDGNRNKIDLNCAFCSCQETWDLHSAFCLRRVFGY

Query:  HDDGEPVVRAYVCENGHVSGAWTDLPLYT
        HDDGEPVVRAYVCENGHVSGAWTDLPLYT
Subjt:  HDDGEPVVRAYVCENGHVSGAWTDLPLYT

A0A6J1DR82 phytochrome A-associated F-box protein isoform X2

7.1e-192

98.77

Show/hide

Query:  MAESAFSNLPEDVLLNIFFKLEDDPRNWARLACVSTKFSSTVRNVCWKTKCSTAIPSLLADLVVGDSVPAGGWASLHKLAVCCPGLLHSGVLLENSDFGL
        MAESAFSNLPEDVLLNIFFKLEDDPRNWARLACVSTKFSSTVRNVCWKTKCSTAIPSLLADLVVGDSVPAGGWASLHKLAVCCPGLLHSGVLLENSDFGL
Subjt:  MAESAFSNLPEDVLLNIFFKLEDDPRNWARLACVSTKFSSTVRNVCWKTKCSTAIPSLLADLVVGDSVPAGGWASLHKLAVCCPGLLHSGVLLENSDFGL

Query:  ERELGPDENYLELAPSQHPKPDTGTDTDTQFQVNSDFSASASSDCAWSLYDDLYLDTVYNDSEAPDVPDPQIGATKVEKGVFMADREFSASKRRKIYRSM
        ERELGPDENYLELAPSQHPKP    DTDTQFQVNSDFSASASSDCAWSLYDDLYLDTVYNDSEAPDVPDPQIGATKVEKGVFMADREFSASKRRKIYRSM
Subjt:  ERELGPDENYLELAPSQHPKPDTGTDTDTQFQVNSDFSASASSDCAWSLYDDLYLDTVYNDSEAPDVPDPQIGATKVEKGVFMADREFSASKRRKIYRSM

Query:  RSHLASGVWNLSREQGNKLLRSRFRGDCLYICDWPGCVHIEEKRNYMLFRGIFKNFKASHVWRTIKDGNRNKIDLNCAFCSCQETWDLHSAFCLRRVFGY
        RSHLASGVWNLSREQGNKLLRSRFRGDCLYICDWPGCVHIEEKRNYMLFRGIFKNFKASHVWRTIKDGNRNKIDLNCAFCSCQETWDLHSAFCLRRVFGY
Subjt:  RSHLASGVWNLSREQGNKLLRSRFRGDCLYICDWPGCVHIEEKRNYMLFRGIFKNFKASHVWRTIKDGNRNKIDLNCAFCSCQETWDLHSAFCLRRVFGY

Query:  HDDGEPVVRAYVCENGHVSGAWTDLP
        HDDGEPVVRAYVCENGHVSGAWTDLP
Subjt:  HDDGEPVVRAYVCENGHVSGAWTDLP

SwissProt top hits

e value

%identity

Alignment

Q8LEA8 Phytochrome A-associated F-box protein

2.3e-123

62.72

Show/hide

Query:  MAESAFSNLPEDVLLNIFFKLEDDPRNWARLACVSTKFSSTVRNVCWKTKCSTAIPSLLADLV--------------VGDS--VPAGGWASLHKLAVCCP
        MAES FS +PEDV+ NIFFKL+DDPRNWARLACV TKFSS VRNVC KT+C +AIP++++DL+                DS   P GGWASL+KLAVCCP
Subjt:  MAESAFSNLPEDVLLNIFFKLEDDPRNWARLACVSTKFSSTVRNVCWKTKCSTAIPSLLADLV--------------VGDS--VPAGGWASLHKLAVCCP

Query:  GLLHSGVLLENSDFGLERELGPDENYLELAPSQHPKPDTGTDTDTQFQVNSDFSASASSDCAWSLYDDLYLDTVYNDSEAPDVPDPQIGATKVEKGVFMA
        GL H+G+LLENSDFGLERELGPD+N         PKP T        +V+    +   +   WSLYDDLY DT+        + D +    ++E      
Subjt:  GLLHSGVLLENSDFGLERELGPDENYLELAPSQHPKPDTGTDTDTQFQVNSDFSASASSDCAWSLYDDLYLDTVYNDSEAPDVPDPQIGATKVEKGVFMA

Query:  DREFSASKRRKIYRSMRSHLASGVWNLSREQGNKLLRSRFRGDCLYICDWPGCVHIEEKRNYMLFRGIFKNFKASHVWRTIKDGNRNKID-LNCAFCSCQ
         R+    KRRKI RS+ SHLASG WNLSREQGNKLL SRFRGDCLYIC+WPGC+H+EEKRNYMLFRG+FK+FK S VWRTI DGNR+K   L CAFC C 
Subjt:  DREFSASKRRKIYRSMRSHLASGVWNLSREQGNKLLRSRFRGDCLYICDWPGCVHIEEKRNYMLFRGIFKNFKASHVWRTIKDGNRNKID-LNCAFCSCQ

Query:  ETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
        ETWDLHS+FCLRRVFG+HDDGEPVVRAYVCENGHVSGAWT LPLYT
Subjt:  ETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT

Q9LF38 EID1-like F-box protein 1

5.0e-09

23.56

Show/hide

Query:  NLPEDVLLNIFFKLEDDPRNWARLACVSTKFSSTVRNVCWKTKCSTAIPSLLADL-VVGDSVPAGGWASLHKLAVCCPGLLHSGVLLENSDFGLERELGP
        +L EDVLL +F  L  +P+  A L+CV   F    + V WK  C T  P ++ DL   G     G W +L KL + C G    G+               
Subjt:  NLPEDVLLNIFFKLEDDPRNWARLACVSTKFSSTVRNVCWKTKCSTAIPSLLADL-VVGDSVPAGGWASLHKLAVCCPGLLHSGVLLENSDFGLERELGP

Query:  DENYLELAPSQHPKPDTGTDTDTQFQVNSDFSASASSDCAWSLYDDLYLDTVYNDSEAPDVPDPQIGATKVEKGVFMADREFSASKRRKIYRSMRSHLAS
                             ++  Q+   F                                                          +YR+       
Subjt:  DENYLELAPSQHPKPDTGTDTDTQFQVNSDFSASASSDCAWSLYDDLYLDTVYNDSEAPDVPDPQIGATKVEKGVFMADREFSASKRRKIYRSMRSHLAS

Query:  GVWNLSREQGNKLLRSRFRGDCLYICDWPGCVHIE--EKRNYMLFRGIFKNFKASHVWRTI--KDGNRNKIDLNCAFCSCQETWDLHSA------FCLRR
             SR  G  LL  + R D LY+CD   C H++  E+ +  LFRGIFK+F  S V + I  K    +  ++ C +C   + W +  A       C+ R
Subjt:  GVWNLSREQGNKLLRSRFRGDCLYICDWPGCVHIE--EKRNYMLFRGIFKNFKASHVWRTI--KDGNRNKIDLNCAFCSCQETWDLHSA------FCLRR

Query:  VFGYHDDGEPVVRAYVCENGHVSGAWTDLPL
        +  Y D     +  +VC NGH+ G  T  PL
Subjt:  VFGYHDDGEPVVRAYVCENGHVSGAWTDLPL

Arabidopsis top hits

e value

%identity

Alignment

AT4G02440.1 F-box family protein

1.6e-124

62.72

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Query:  MAESAFSNLPEDVLLNIFFKLEDDPRNWARLACVSTKFSSTVRNVCWKTKCSTAIPSLLADLV--------------VGDS--VPAGGWASLHKLAVCCP
        MAES FS +PEDV+ NIFFKL+DDPRNWARLACV TKFSS VRNVC KT+C +AIP++++DL+                DS   P GGWASL+KLAVCCP
Subjt:  MAESAFSNLPEDVLLNIFFKLEDDPRNWARLACVSTKFSSTVRNVCWKTKCSTAIPSLLADLV--------------VGDS--VPAGGWASLHKLAVCCP

Query:  GLLHSGVLLENSDFGLERELGPDENYLELAPSQHPKPDTGTDTDTQFQVNSDFSASASSDCAWSLYDDLYLDTVYNDSEAPDVPDPQIGATKVEKGVFMA
        GL H+G+LLENSDFGLERELGPD+N         PKP T        +V+    +   +   WSLYDDLY DT+        + D +    ++E      
Subjt:  GLLHSGVLLENSDFGLERELGPDENYLELAPSQHPKPDTGTDTDTQFQVNSDFSASASSDCAWSLYDDLYLDTVYNDSEAPDVPDPQIGATKVEKGVFMA

Query:  DREFSASKRRKIYRSMRSHLASGVWNLSREQGNKLLRSRFRGDCLYICDWPGCVHIEEKRNYMLFRGIFKNFKASHVWRTIKDGNRNKID-LNCAFCSCQ
         R+    KRRKI RS+ SHLASG WNLSREQGNKLL SRFRGDCLYIC+WPGC+H+EEKRNYMLFRG+FK+FK S VWRTI DGNR+K   L CAFC C 
Subjt:  DREFSASKRRKIYRSMRSHLASGVWNLSREQGNKLLRSRFRGDCLYICDWPGCVHIEEKRNYMLFRGIFKNFKASHVWRTIKDGNRNKID-LNCAFCSCQ

Query:  ETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
        ETWDLHS+FCLRRVFG+HDDGEPVVRAYVCENGHVSGAWT LPLYT
Subjt:  ETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT

AT5G15440.1 EID1-like 1

3.5e-10

23.56

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Query:  NLPEDVLLNIFFKLEDDPRNWARLACVSTKFSSTVRNVCWKTKCSTAIPSLLADL-VVGDSVPAGGWASLHKLAVCCPGLLHSGVLLENSDFGLERELGP
        +L EDVLL +F  L  +P+  A L+CV   F    + V WK  C T  P ++ DL   G     G W +L KL + C G    G+               
Subjt:  NLPEDVLLNIFFKLEDDPRNWARLACVSTKFSSTVRNVCWKTKCSTAIPSLLADL-VVGDSVPAGGWASLHKLAVCCPGLLHSGVLLENSDFGLERELGP

Query:  DENYLELAPSQHPKPDTGTDTDTQFQVNSDFSASASSDCAWSLYDDLYLDTVYNDSEAPDVPDPQIGATKVEKGVFMADREFSASKRRKIYRSMRSHLAS
                             ++  Q+   F                                                          +YR+       
Subjt:  DENYLELAPSQHPKPDTGTDTDTQFQVNSDFSASASSDCAWSLYDDLYLDTVYNDSEAPDVPDPQIGATKVEKGVFMADREFSASKRRKIYRSMRSHLAS

Query:  GVWNLSREQGNKLLRSRFRGDCLYICDWPGCVHIE--EKRNYMLFRGIFKNFKASHVWRTI--KDGNRNKIDLNCAFCSCQETWDLHSA------FCLRR
             SR  G  LL  + R D LY+CD   C H++  E+ +  LFRGIFK+F  S V + I  K    +  ++ C +C   + W +  A       C+ R
Subjt:  GVWNLSREQGNKLLRSRFRGDCLYICDWPGCVHIE--EKRNYMLFRGIFKNFKASHVWRTI--KDGNRNKIDLNCAFCSCQETWDLHSA------FCLRR

Query:  VFGYHDDGEPVVRAYVCENGHVSGAWTDLPL
        +  Y D     +  +VC NGH+ G  T  PL
Subjt:  VFGYHDDGEPVVRAYVCENGHVSGAWTDLPL

Sequences

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CDS sequence

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ATGGCGGAATCTGCCTTCTCCAACCTTCCCGAGGACGTTCTTCTCAACATTTTCTTCAAGCTCGAAGACGATCCCCGCAACTGGGCGCGATTGGCCTGCGTTTCCACCAA
ATTCTCCTCCACCGTCCGAAATGTCTGCTGGAAGACCAAGTGCTCCACCGCCATCCCTTCCCTCCTCGCCGATCTTGTCGTCGGCGACTCTGTTCCCGCCGGCGGGTGGG
CCTCGCTTCACAAGCTCGCCGTCTGCTGCCCGGGCCTCCTCCATTCCGGTGTTCTCCTCGAGAATTCCGATTTCGGCCTCGAGCGCGAGCTTGGGCCCGATGAAAATTAT
CTCGAATTGGCCCCCTCTCAGCACCCTAAACCGGACACGGGCACGGACACGGACACTCAGTTCCAGGTCAATTCTGATTTCTCTGCTTCTGCGTCGTCTGATTGCGCCTG
GTCTCTCTACGATGATTTGTATCTCGATACTGTGTATAACGATTCTGAGGCGCCCGATGTCCCCGATCCCCAAATCGGGGCCACGAAAGTGGAGAAGGGTGTTTTTATGG
CGGACAGGGAATTCTCTGCTTCCAAGAGGAGGAAGATCTACAGGTCCATGAGGTCGCATTTGGCATCTGGTGTTTGGAATTTGAGCAGGGAGCAAGGGAACAAGCTTCTC
CGTAGCCGATTCCGAGGCGATTGTTTGTACATTTGTGATTGGCCTGGATGCGTTCATATTGAAGAGAAGCGGAACTACATGCTTTTCAGAGGCATTTTCAAGAACTTCAA
GGCGTCTCATGTTTGGAGAACGATAAAGGATGGTAACAGGAACAAAATTGATCTGAATTGTGCGTTTTGTTCCTGTCAGGAGACTTGGGATTTGCATTCTGCCTTCTGTT
TGAGGCGGGTTTTTGGGTACCATGATGATGGAGAGCCAGTTGTTCGAGCTTATGTCTGTGAGAATGGCCATGTCTCTGGAGCTTGGACGGATCTGCCATTGTACACT

mRNA sequence

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Protein sequence

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MAESAFSNLPEDVLLNIFFKLEDDPRNWARLACVSTKFSSTVRNVCWKTKCSTAIPSLLADLVVGDSVPAGGWASLHKLAVCCPGLLHSGVLLENSDFGLERELGPDENY
LELAPSQHPKPDTGTDTDTQFQVNSDFSASASSDCAWSLYDDLYLDTVYNDSEAPDVPDPQIGATKVEKGVFMADREFSASKRRKIYRSMRSHLASGVWNLSREQGNKLL
RSRFRGDCLYICDWPGCVHIEEKRNYMLFRGIFKNFKASHVWRTIKDGNRNKIDLNCAFCSCQETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT

MS019047 (gene) of Bitter gourd (TR) v1 genome