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MS019067 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019067
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein TIC 214
Genome locationscaffold20:1159250..1159345
RNA-Seq ExpressionMS019067
SyntenyMS019067
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ANI25242.1 photosystem I assembly protein Ycf1 [Gynostemma pentaphyllum]1.8e-0684.38Show/hide
Query:  DLAYMNRYWFDTNNSSRFIVLRIHMYKQLKIC
        DLA MNRYWFDTNNSSRF +LRIHMY QL+IC
Subjt:  DLAYMNRYWFDTNNSSRFIVLRIHMYKQLKIC
YP_009430686.1 photosystem I assembly protein Ycf1 [Gynostemma cardiospermum]6.3e-0787.5Show/hide
Query:  DLAYMNRYWFDTNNSSRFIVLRIHMYKQLKIC
        DLA MNRYWFDTNNSSRF +LRIHMY QLKIC
Subjt:  DLAYMNRYWFDTNNSSRFIVLRIHMYKQLKIC
YP_009439863.1 photosystem I assembly protein Ycf1 [Gynostemma laxiflorum]6.3e-0787.5Show/hide
Query:  DLAYMNRYWFDTNNSSRFIVLRIHMYKQLKIC
        DLA MNRYWFDTNNSSRF +LRIHMY QLKIC
Subjt:  DLAYMNRYWFDTNNSSRFIVLRIHMYKQLKIC
YP_009440216.1 photosystem I assembly protein Ycf1 [Gynostemma longipes]1.8e-0684.38Show/hide
Query:  DLAYMNRYWFDTNNSSRFIVLRIHMYKQLKIC
        DLA MNRYWFDTNNSSRF +LRIHMY QL+IC
Subjt:  DLAYMNRYWFDTNNSSRFIVLRIHMYKQLKIC
YP_009468920.1 photosystem I assembly protein Ycf1 [Gynostemma compressum]1.8e-0684.38Show/hide
Query:  DLAYMNRYWFDTNNSSRFIVLRIHMYKQLKIC
        DLA MNRYWFDTNNSSRF +LRIHMY QL+IC
Subjt:  DLAYMNRYWFDTNNSSRFIVLRIHMYKQLKIC
TrEMBL top hitse value%identityAlignment
A0A191T4C4 Protein TIC 2148.9e-0784.38Show/hide
Query:  DLAYMNRYWFDTNNSSRFIVLRIHMYKQLKIC
        DLA MNRYWFDTNNSSRF +LRIHMY QL+IC
Subjt:  DLAYMNRYWFDTNNSSRFIVLRIHMYKQLKIC
A0A286KTW6 Protein TIC 2143.1e-0787.5Show/hide
Query:  DLAYMNRYWFDTNNSSRFIVLRIHMYKQLKIC
        DLA MNRYWFDTNNSSRF +LRIHMY QLKIC
Subjt:  DLAYMNRYWFDTNNSSRFIVLRIHMYKQLKIC
A0A291IAB4 Protein TIC 2143.1e-0787.5Show/hide
Query:  DLAYMNRYWFDTNNSSRFIVLRIHMYKQLKIC
        DLA MNRYWFDTNNSSRF +LRIHMY QLKIC
Subjt:  DLAYMNRYWFDTNNSSRFIVLRIHMYKQLKIC
A0A291IB09 Protein TIC 2148.9e-0784.38Show/hide
Query:  DLAYMNRYWFDTNNSSRFIVLRIHMYKQLKIC
        DLA MNRYWFDTNNSSRF +LRIHMY QL+IC
Subjt:  DLAYMNRYWFDTNNSSRFIVLRIHMYKQLKIC
A0A2L0WQZ5 Protein TIC 2148.9e-0784.38Show/hide
Query:  DLAYMNRYWFDTNNSSRFIVLRIHMYKQLKIC
        DLA MNRYWFDTNNSSRF +LRIHMY QL+IC
Subjt:  DLAYMNRYWFDTNNSSRFIVLRIHMYKQLKIC
SwissProt top hitse value%identityAlignment
P12222 Protein TIC 2141.6e-0883.87Show/hide
Query:  DLAYMNRYWFDTNNSSRFIVLRIHMYKQLKI
        DLA MNRYWFDTNN SRF +LRIHMY QLKI
Subjt:  DLAYMNRYWFDTNNSSRFIVLRIHMYKQLKI
Q2MIC9 Protein TIC 2144.5e-0880.65Show/hide
Query:  DLAYMNRYWFDTNNSSRFIVLRIHMYKQLKI
        DLA MNRYWFDTNN SRF +LRIHMY +LKI
Subjt:  DLAYMNRYWFDTNNSSRFIVLRIHMYKQLKI
Q33BW4 Protein TIC 2144.5e-0880.65Show/hide
Query:  DLAYMNRYWFDTNNSSRFIVLRIHMYKQLKI
        DLA MNRYWFDTNN SRF +LRIHMY +LKI
Subjt:  DLAYMNRYWFDTNNSSRFIVLRIHMYKQLKI
Q3C1P6 Protein TIC 2141.6e-0883.87Show/hide
Query:  DLAYMNRYWFDTNNSSRFIVLRIHMYKQLKI
        DLA MNRYWFDTNN SRF +LRIHMY QLKI
Subjt:  DLAYMNRYWFDTNNSSRFIVLRIHMYKQLKI
Q4VZL0 Protein TIC 2149.1e-0987.1Show/hide
Query:  DLAYMNRYWFDTNNSSRFIVLRIHMYKQLKI
        DLA MNRYWFDTNNSSRF +LRIHMY QLKI
Subjt:  DLAYMNRYWFDTNNSSRFIVLRIHMYKQLKI
Arabidopsis top hitse value%identityAlignment
ATCG01130.1 Ycf1 protein1.8e-0454.84Show/hide
Query:  DLAYMNRYWFDTNNSSRFIVLRIHMYKQLKI
        DLA MNRYWF+T N + F ++RI MY +  I
Subjt:  DLAYMNRYWFDTNNSSRFIVLRIHMYKQLKI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GATTTAGCTTACATGAATCGTTATTGGTTTGATACCAATAATAGCAGTCGTTTTATTGTGCTAAGAATCCATATGTATAAACAATTAAAAATTTGT
mRNA sequenceShow/hide mRNA sequence
GATTTAGCTTACATGAATCGTTATTGGTTTGATACCAATAATAGCAGTCGTTTTATTGTGCTAAGAATCCATATGTATAAACAATTAAAAATTTGT
Protein sequenceShow/hide protein sequence
DLAYMNRYWFDTNNSSRFIVLRIHMYKQLKIC