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MS019071 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019071
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description4-coumarate--CoA ligase
Genome locationscaffold20:1180284..1180385
RNA-Seq ExpressionMS019071
SyntenyMS019071
Gene Ontology termsGO:0016874 - ligase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598848.1 4-coumarate--CoA ligase 2, partial [Cucurbita argyrosperma subsp. sororia]2.4e-0464.71Show/hide
Query:  NNPEFIFAFLGISYSGVISSIANPLYKPMDLAKR
        N+PEF+FAFLG SY+G IS+ ANPLYKP ++ K+
Subjt:  NNPEFIFAFLGISYSGVISSIANPLYKPMDLAKR

KAG7029790.1 4-coumarate--CoA ligase 1, partial [Cucurbita argyrosperma subsp. argyrosperma]2.4e-0464.71Show/hide
Query:  NNPEFIFAFLGISYSGVISSIANPLYKPMDLAKR
        N+PEF+FAFLG SY+G IS+ ANPLYKP ++ K+
Subjt:  NNPEFIFAFLGISYSGVISSIANPLYKPMDLAKR

XP_022153289.1 4-coumarate--CoA ligase 1-like [Momordica charantia]8.2e-0567.65Show/hide
Query:  NNPEFIFAFLGISYSGVISSIANPLYKPMDLAKR
        N+PEF+FAFLG SY G IS+ ANPLYKP ++AK+
Subjt:  NNPEFIFAFLGISYSGVISSIANPLYKPMDLAKR

XP_022929776.1 4-coumarate--CoA ligase 2-like [Cucurbita moschata]2.4e-0464.71Show/hide
Query:  NNPEFIFAFLGISYSGVISSIANPLYKPMDLAKR
        N+PEF+FAFLG SY+G IS+ ANPLYKP ++ K+
Subjt:  NNPEFIFAFLGISYSGVISSIANPLYKPMDLAKR

XP_023546819.1 4-coumarate--CoA ligase 2-like [Cucurbita pepo subsp. pepo]2.4e-0464.71Show/hide
Query:  NNPEFIFAFLGISYSGVISSIANPLYKPMDLAKR
        N+PEF+FAFLG SY+G IS+ ANPLYKP ++ K+
Subjt:  NNPEFIFAFLGISYSGVISSIANPLYKPMDLAKR

TrEMBL top hitse value%identityAlignment
A0A5B6Z8N7 4-coumarate--CoA ligase (Fragment)7.5e-0461.76Show/hide
Query:  NNPEFIFAFLGISYSGVISSIANPLYKPMDLAKR
        N+PEF+FAFLG SY G IS+ ANP Y P ++AK+
Subjt:  NNPEFIFAFLGISYSGVISSIANPLYKPMDLAKR

A0A5B6ZBX8 4-coumarate--CoA ligase7.5e-0461.76Show/hide
Query:  NNPEFIFAFLGISYSGVISSIANPLYKPMDLAKR
        N+PEF+FAFLG SY G IS+ ANP Y P ++AK+
Subjt:  NNPEFIFAFLGISYSGVISSIANPLYKPMDLAKR

A0A6J1DIM3 4-coumarate--CoA ligase 1-like4.0e-0567.65Show/hide
Query:  NNPEFIFAFLGISYSGVISSIANPLYKPMDLAKR
        N+PEF+FAFLG SY G IS+ ANPLYKP ++AK+
Subjt:  NNPEFIFAFLGISYSGVISSIANPLYKPMDLAKR

A0A6J1EP35 4-coumarate--CoA ligase 2-like1.2e-0464.71Show/hide
Query:  NNPEFIFAFLGISYSGVISSIANPLYKPMDLAKR
        N+PEF+FAFLG SY+G IS+ ANPLYKP ++ K+
Subjt:  NNPEFIFAFLGISYSGVISSIANPLYKPMDLAKR

A0A6J1KB99 4-coumarate--CoA ligase 2-like1.2e-0464.71Show/hide
Query:  NNPEFIFAFLGISYSGVISSIANPLYKPMDLAKR
        N+PEF+FAFLG SY+G IS+ ANPLYKP ++ K+
Subjt:  NNPEFIFAFLGISYSGVISSIANPLYKPMDLAKR

SwissProt top hitse value%identityAlignment
I3PB37 4-coumarate:CoA ligase 11.0e-0555.88Show/hide
Query:  NNPEFIFAFLGISYSGVISSIANPLYKPMDLAKR
        N+PEF+FAF+G SY G IS++ANPL+ P ++ K+
Subjt:  NNPEFIFAFLGISYSGVISSIANPLYKPMDLAKR

O24145 4-coumarate--CoA ligase 11.0e-0555.88Show/hide
Query:  NNPEFIFAFLGISYSGVISSIANPLYKPMDLAKR
        N+PEF+FAF+G SY G IS++ANPL+ P ++ K+
Subjt:  NNPEFIFAFLGISYSGVISSIANPLYKPMDLAKR

O24146 4-coumarate--CoA ligase 21.0e-0555.88Show/hide
Query:  NNPEFIFAFLGISYSGVISSIANPLYKPMDLAKR
        N+PEF+FAF+G SY G IS++ANPL+ P ++ K+
Subjt:  NNPEFIFAFLGISYSGVISSIANPLYKPMDLAKR

P31684 4-coumarate--CoA ligase 12.9e-0555.88Show/hide
Query:  NNPEFIFAFLGISYSGVISSIANPLYKPMDLAKR
        N PEF+FAF+G SY G IS++ANPL+ P ++ K+
Subjt:  NNPEFIFAFLGISYSGVISSIANPLYKPMDLAKR

P31685 4-coumarate--CoA ligase 22.9e-0555.88Show/hide
Query:  NNPEFIFAFLGISYSGVISSIANPLYKPMDLAKR
        N PEF+FAF+G SY G IS++ANPL+ P ++ K+
Subjt:  NNPEFIFAFLGISYSGVISSIANPLYKPMDLAKR

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AACAACCCGGAATTCATCTTCGCCTTCCTCGGCATTTCGTACAGTGGCGTGATTAGCAGCATCGCAAACCCGCTGTACAAGCCGATGGATTTGGCGAAGCGG
mRNA sequenceShow/hide mRNA sequence
AACAACCCGGAATTCATCTTCGCCTTCCTCGGCATTTCGTACAGTGGCGTGATTAGCAGCATCGCAAACCCGCTGTACAAGCCGATGGATTTGGCGAAGCGG
Protein sequenceShow/hide protein sequence
NNPEFIFAFLGISYSGVISSIANPLYKPMDLAKR