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MS019073 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019073
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold20:1189493..1189696
RNA-Seq ExpressionMS019073
SyntenyMS019073
Gene Ontology termsGO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBN69746.1 VIRB2-interacting protein 2 [Prunus dulcis]7.6e-1044.29Show/hide
Query:  KLNNS--ICQAIIKREYFYVDWAFLEGVLTQKQFGKKWRRWISGCVRGTKFFIFINGRPKGRILASRGLR
        +LN S  + +  +++ Y +V+W F++ VL +K FG +WR WI GC+    F + INGRP+G+  ASRGLR
Subjt:  KLNNS--ICQAIIKREYFYVDWAFLEGVLTQKQFGKKWRRWISGCVRGTKFFIFINGRPKGRILASRGLR

TYK31266.1 hypothetical protein E5676_scaffold455G005560 [Cucumis melo var. makuwa]3.4e-1051.72Show/hide
Query:  IKREYFYVDWAFLEGVLTQKQFGKKWRRWISGCVRGTKFFIFINGRPKGRILASRGLR
        +++ +  VDW FLE  L+ K+F  KW  WI GC++  KF IF+NG+P+GRI ASRG+R
Subjt:  IKREYFYVDWAFLEGVLTQKQFGKKWRRWISGCVRGTKFFIFINGRPKGRILASRGLR

XP_022158566.1 uncharacterized protein LOC111025019 [Momordica charantia]8.1e-1264.71Show/hide
Query:  VDWAFLEGVLTQKQFGKKWRRWISGCVRGTKFFIFINGRPKGRILASRGLR
        VDW FL+ VL QK FGK+WR WI GCV    F +FINGRP+G+I A+RGLR
Subjt:  VDWAFLEGVLTQKQFGKKWRRWISGCVRGTKFFIFINGRPKGRILASRGLR

XP_030497604.1 uncharacterized protein LOC115713262 [Cannabis sativa]3.4e-1054.39Show/hide
Query:  KREYFYVDWAFLEGVLTQKQFGKKWRRWISGCVRGTKFFIFINGRPKGRILASRGLR
        ++ Y  VDW FL+ VL  K FG  WR+WI+GC+  T F +FINGRP+G+  +SRGLR
Subjt:  KREYFYVDWAFLEGVLTQKQFGKKWRRWISGCVRGTKFFIFINGRPKGRILASRGLR

XP_038889274.1 uncharacterized protein LOC120079176 [Benincasa hispida]7.6e-1050Show/hide
Query:  IKREYFYVDWAFLEGVLTQKQFGKKWRRWISGCVRGTKFFIFINGRPKGRILASRGLR
        +++ +  VDW FLE VL  K F +KW  WI GCV+   F +FINGRP+GR+  +RG+R
Subjt:  IKREYFYVDWAFLEGVLTQKQFGKKWRRWISGCVRGTKFFIFINGRPKGRILASRGLR

TrEMBL top hitse value%identityAlignment
A0A5D3E6J9 Reverse transcriptase domain-containing protein1.7e-1051.72Show/hide
Query:  IKREYFYVDWAFLEGVLTQKQFGKKWRRWISGCVRGTKFFIFINGRPKGRILASRGLR
        +++ +  VDW FLE  L+ K+F  KW  WI GC++  KF IF+NG+P+GRI ASRG+R
Subjt:  IKREYFYVDWAFLEGVLTQKQFGKKWRRWISGCVRGTKFFIFINGRPKGRILASRGLR

A0A6J1E196 uncharacterized protein LOC1110250193.9e-1264.71Show/hide
Query:  VDWAFLEGVLTQKQFGKKWRRWISGCVRGTKFFIFINGRPKGRILASRGLR
        VDW FL+ VL QK FGK+WR WI GCV    F +FINGRP+G+I A+RGLR
Subjt:  VDWAFLEGVLTQKQFGKKWRRWISGCVRGTKFFIFINGRPKGRILASRGLR

A0A803P8A0 Uncharacterized protein2.2e-1054.39Show/hide
Query:  KREYFYVDWAFLEGVLTQKQFGKKWRRWISGCVRGTKFFIFINGRPKGRILASRGLR
        ++ Y  VDW FL+ VL +K FG++WR+WI GCV  T F IF+NGR +G+   SRGLR
Subjt:  KREYFYVDWAFLEGVLTQKQFGKKWRRWISGCVRGTKFFIFINGRPKGRILASRGLR

A0A803QEA6 Uncharacterized protein1.3e-1056.14Show/hide
Query:  KREYFYVDWAFLEGVLTQKQFGKKWRRWISGCVRGTKFFIFINGRPKGRILASRGLR
        ++ Y  VDW FL+ VL +K FG++WR+WI GCV  T F IFINGR +G+   SRGLR
Subjt:  KREYFYVDWAFLEGVLTQKQFGKKWRRWISGCVRGTKFFIFINGRPKGRILASRGLR

M5XUF8 Reverse transcriptase domain-containing protein (Fragment)1.3e-1045.71Show/hide
Query:  KLNNS--ICQAIIKREYFYVDWAFLEGVLTQKQFGKKWRRWISGCVRGTKFFIFINGRPKGRILASRGLR
        +LN S  + +  +++ Y +V+W F++ VL +K FG +WR WI GC+    F + INGRP+G+I ASRGLR
Subjt:  KLNNS--ICQAIIKREYFYVDWAFLEGVLTQKQFGKKWRRWISGCVRGTKFFIFINGRPKGRILASRGLR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAGTTGAATAATAGTATTTGTCAAGCAATTATTAAGAGGGAGTATTTCTATGTTGATTGGGCCTTTTTAGAAGGTGTGCTTACACAAAAACAGTTTGGGAAGAAATGGCG
TAGATGGATCAGTGGCTGTGTAAGAGGAACTAAGTTCTTCATATTTATTAATGGTAGACCTAAGGGTCGTATTTTGGCCTCTAGGGGTCTAAGA
mRNA sequenceShow/hide mRNA sequence
AAGTTGAATAATAGTATTTGTCAAGCAATTATTAAGAGGGAGTATTTCTATGTTGATTGGGCCTTTTTAGAAGGTGTGCTTACACAAAAACAGTTTGGGAAGAAATGGCG
TAGATGGATCAGTGGCTGTGTAAGAGGAACTAAGTTCTTCATATTTATTAATGGTAGACCTAAGGGTCGTATTTTGGCCTCTAGGGGTCTAAGA
Protein sequenceShow/hide protein sequence
KLNNSICQAIIKREYFYVDWAFLEGVLTQKQFGKKWRRWISGCVRGTKFFIFINGRPKGRILASRGLR