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MS019077 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019077
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold20:1219973..1220395
RNA-Seq ExpressionMS019077
SyntenyMS019077
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143372.1 uncharacterized protein LOC111013256 isoform X1 [Momordica charantia]1.7e-67100Show/hide
Query:  MISHVKGLFPRPLSPPVAAHPNWNSAVVRFAAPLALTRASCRIATTAAAILAAAVVIASPAPSAATENSSSSSISEQEAETTLSNIPQTLSGECAVPSDC
        MISHVKGLFPRPLSPPVAAHPNWNSAVVRFAAPLALTRASCRIATTAAAILAAAVVIASPAPSAATENSSSSSISEQEAETTLSNIPQTLSGECAVPSDC
Subjt:  MISHVKGLFPRPLSPPVAAHPNWNSAVVRFAAPLALTRASCRIATTAAAILAAAVVIASPAPSAATENSSSSSISEQEAETTLSNIPQTLSGECAVPSDC

Query:  KRARIQRPKSRKAESCTIKCVGTCIRGGEGSPGEGPLNIRR
        KRARIQRPKSRKAESCTIKCVGTCIRGGEGSPGEGPLNIRR
Subjt:  KRARIQRPKSRKAESCTIKCVGTCIRGGEGSPGEGPLNIRR
XP_022143373.1 uncharacterized protein LOC111013256 isoform X2 [Momordica charantia]1.7e-67100Show/hide
Query:  MISHVKGLFPRPLSPPVAAHPNWNSAVVRFAAPLALTRASCRIATTAAAILAAAVVIASPAPSAATENSSSSSISEQEAETTLSNIPQTLSGECAVPSDC
        MISHVKGLFPRPLSPPVAAHPNWNSAVVRFAAPLALTRASCRIATTAAAILAAAVVIASPAPSAATENSSSSSISEQEAETTLSNIPQTLSGECAVPSDC
Subjt:  MISHVKGLFPRPLSPPVAAHPNWNSAVVRFAAPLALTRASCRIATTAAAILAAAVVIASPAPSAATENSSSSSISEQEAETTLSNIPQTLSGECAVPSDC

Query:  KRARIQRPKSRKAESCTIKCVGTCIRGGEGSPGEGPLNIRR
        KRARIQRPKSRKAESCTIKCVGTCIRGGEGSPGEGPLNIRR
Subjt:  KRARIQRPKSRKAESCTIKCVGTCIRGGEGSPGEGPLNIRR
XP_022934221.1 uncharacterized protein LOC111441457 isoform X1 [Cucurbita moschata]2.6e-5285.11Show/hide
Query:  MISHVKGLFPRPLSPPVAAHPNWNSAVVRFAAPLALTRASCRIATTAAAILAAAVVIASPAPSAATENSSSSSISEQEAETTLSNIPQTLSGECAVPSDC
        MISHVKG FP P+  P  AHPNWNSAVVRF APLALTRASCRIATTAAAILAAAVVI SPAPSAA E+SS+ S  +QE  TTLSNIPQTLSGECA PSDC
Subjt:  MISHVKGLFPRPLSPPVAAHPNWNSAVVRFAAPLALTRASCRIATTAAAILAAAVVIASPAPSAATENSSSSSISEQEAETTLSNIPQTLSGECAVPSDC

Query:  KRARIQRPKSRKAESCTIKCVGTCIRGGEGSPGEGPLNIRR
        K+ARIQRPKSRKAESCTIKCVGTCIRGG+GSPGEGPLNIRR
Subjt:  KRARIQRPKSRKAESCTIKCVGTCIRGGEGSPGEGPLNIRR
XP_022934222.1 uncharacterized protein LOC111441457 isoform X2 [Cucurbita moschata]2.6e-5285.11Show/hide
Query:  MISHVKGLFPRPLSPPVAAHPNWNSAVVRFAAPLALTRASCRIATTAAAILAAAVVIASPAPSAATENSSSSSISEQEAETTLSNIPQTLSGECAVPSDC
        MISHVKG FP P+  P  AHPNWNSAVVRF APLALTRASCRIATTAAAILAAAVVI SPAPSAA E+SS+ S  +QE  TTLSNIPQTLSGECA PSDC
Subjt:  MISHVKGLFPRPLSPPVAAHPNWNSAVVRFAAPLALTRASCRIATTAAAILAAAVVIASPAPSAATENSSSSSISEQEAETTLSNIPQTLSGECAVPSDC

Query:  KRARIQRPKSRKAESCTIKCVGTCIRGGEGSPGEGPLNIRR
        K+ARIQRPKSRKAESCTIKCVGTCIRGG+GSPGEGPLNIRR
Subjt:  KRARIQRPKSRKAESCTIKCVGTCIRGGEGSPGEGPLNIRR
XP_023526622.1 uncharacterized protein LOC111790064 isoform X1 [Cucurbita pepo subsp. pepo]3.4e-5285.11Show/hide
Query:  MISHVKGLFPRPLSPPVAAHPNWNSAVVRFAAPLALTRASCRIATTAAAILAAAVVIASPAPSAATENSSSSSISEQEAETTLSNIPQTLSGECAVPSDC
        MISHVKG FP P+  P  AHPNWNSAVVRF APLALTRASCRIATTAAAILAAAVVI SPAPSAA E+SS+ S  +QE  TTLSNIPQTLSGECA PSDC
Subjt:  MISHVKGLFPRPLSPPVAAHPNWNSAVVRFAAPLALTRASCRIATTAAAILAAAVVIASPAPSAATENSSSSSISEQEAETTLSNIPQTLSGECAVPSDC

Query:  KRARIQRPKSRKAESCTIKCVGTCIRGGEGSPGEGPLNIRR
        K+ARIQRPKSRKAESCTIKCVGTCIRGG+GSPGEGPLNIRR
Subjt:  KRARIQRPKSRKAESCTIKCVGTCIRGGEGSPGEGPLNIRR
TrEMBL top hitse value%identityAlignment
A0A6J1CQJ8 uncharacterized protein LOC111013256 isoform X28.0e-68100Show/hide
Query:  MISHVKGLFPRPLSPPVAAHPNWNSAVVRFAAPLALTRASCRIATTAAAILAAAVVIASPAPSAATENSSSSSISEQEAETTLSNIPQTLSGECAVPSDC
        MISHVKGLFPRPLSPPVAAHPNWNSAVVRFAAPLALTRASCRIATTAAAILAAAVVIASPAPSAATENSSSSSISEQEAETTLSNIPQTLSGECAVPSDC
Subjt:  MISHVKGLFPRPLSPPVAAHPNWNSAVVRFAAPLALTRASCRIATTAAAILAAAVVIASPAPSAATENSSSSSISEQEAETTLSNIPQTLSGECAVPSDC

Query:  KRARIQRPKSRKAESCTIKCVGTCIRGGEGSPGEGPLNIRR
        KRARIQRPKSRKAESCTIKCVGTCIRGGEGSPGEGPLNIRR
Subjt:  KRARIQRPKSRKAESCTIKCVGTCIRGGEGSPGEGPLNIRR
A0A6J1CQM1 uncharacterized protein LOC111013256 isoform X18.0e-68100Show/hide
Query:  MISHVKGLFPRPLSPPVAAHPNWNSAVVRFAAPLALTRASCRIATTAAAILAAAVVIASPAPSAATENSSSSSISEQEAETTLSNIPQTLSGECAVPSDC
        MISHVKGLFPRPLSPPVAAHPNWNSAVVRFAAPLALTRASCRIATTAAAILAAAVVIASPAPSAATENSSSSSISEQEAETTLSNIPQTLSGECAVPSDC
Subjt:  MISHVKGLFPRPLSPPVAAHPNWNSAVVRFAAPLALTRASCRIATTAAAILAAAVVIASPAPSAATENSSSSSISEQEAETTLSNIPQTLSGECAVPSDC

Query:  KRARIQRPKSRKAESCTIKCVGTCIRGGEGSPGEGPLNIRR
        KRARIQRPKSRKAESCTIKCVGTCIRGGEGSPGEGPLNIRR
Subjt:  KRARIQRPKSRKAESCTIKCVGTCIRGGEGSPGEGPLNIRR
A0A6J1F186 uncharacterized protein LOC111441457 isoform X11.2e-5285.11Show/hide
Query:  MISHVKGLFPRPLSPPVAAHPNWNSAVVRFAAPLALTRASCRIATTAAAILAAAVVIASPAPSAATENSSSSSISEQEAETTLSNIPQTLSGECAVPSDC
        MISHVKG FP P+  P  AHPNWNSAVVRF APLALTRASCRIATTAAAILAAAVVI SPAPSAA E+SS+ S  +QE  TTLSNIPQTLSGECA PSDC
Subjt:  MISHVKGLFPRPLSPPVAAHPNWNSAVVRFAAPLALTRASCRIATTAAAILAAAVVIASPAPSAATENSSSSSISEQEAETTLSNIPQTLSGECAVPSDC

Query:  KRARIQRPKSRKAESCTIKCVGTCIRGGEGSPGEGPLNIRR
        K+ARIQRPKSRKAESCTIKCVGTCIRGG+GSPGEGPLNIRR
Subjt:  KRARIQRPKSRKAESCTIKCVGTCIRGGEGSPGEGPLNIRR
A0A6J1F235 uncharacterized protein LOC111441457 isoform X21.2e-5285.11Show/hide
Query:  MISHVKGLFPRPLSPPVAAHPNWNSAVVRFAAPLALTRASCRIATTAAAILAAAVVIASPAPSAATENSSSSSISEQEAETTLSNIPQTLSGECAVPSDC
        MISHVKG FP P+  P  AHPNWNSAVVRF APLALTRASCRIATTAAAILAAAVVI SPAPSAA E+SS+ S  +QE  TTLSNIPQTLSGECA PSDC
Subjt:  MISHVKGLFPRPLSPPVAAHPNWNSAVVRFAAPLALTRASCRIATTAAAILAAAVVIASPAPSAATENSSSSSISEQEAETTLSNIPQTLSGECAVPSDC

Query:  KRARIQRPKSRKAESCTIKCVGTCIRGGEGSPGEGPLNIRR
        K+ARIQRPKSRKAESCTIKCVGTCIRGG+GSPGEGPLNIRR
Subjt:  KRARIQRPKSRKAESCTIKCVGTCIRGGEGSPGEGPLNIRR
A0A6J1J797 uncharacterized protein LOC111482398 isoform X14.7e-5284.4Show/hide
Query:  MISHVKGLFPRPLSPPVAAHPNWNSAVVRFAAPLALTRASCRIATTAAAILAAAVVIASPAPSAATENSSSSSISEQEAETTLSNIPQTLSGECAVPSDC
        MISHVKG FP P+  P  AHPNWNSAVVRF APLALTRASCRI TTAAAILAAAVVI SPAPSAA E+SS+ S  +QE  TTLSNIPQTLSGECA PSDC
Subjt:  MISHVKGLFPRPLSPPVAAHPNWNSAVVRFAAPLALTRASCRIATTAAAILAAAVVIASPAPSAATENSSSSSISEQEAETTLSNIPQTLSGECAVPSDC

Query:  KRARIQRPKSRKAESCTIKCVGTCIRGGEGSPGEGPLNIRR
        K+ARIQRPKSRKAESCTIKCVGTCIRGG+GSPGEGPLNIRR
Subjt:  KRARIQRPKSRKAESCTIKCVGTCIRGGEGSPGEGPLNIRR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G78995.1 unknown protein7.0e-1650.93Show/hide
Query:  LALTRASCRIATTAAAILAAAVVIASPAPSAATENSSSSSISEQEAETTLSNIPQTLSGECAVPSDCKRARIQRPKSRKAESCTIKCVGTCIRGGEGSPG
        L    A+ RI+T     +AAAV++A     A +  S+      Q+ E TLSN+PQTLSGE     DCK+ RIQRPKS+ AE CT+KCV TCIR G+   G
Subjt:  LALTRASCRIATTAAAILAAAVVIASPAPSAATENSSSSSISEQEAETTLSNIPQTLSGECAVPSDCKRARIQRPKSRKAESCTIKCVGTCIRGGEGSPG

Query:  EGPLNIRR
        EGP+NIRR
Subjt:  EGPLNIRR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAAGTCATGTAAAAGGTCTATTTCCACGGCCGCTATCACCGCCTGTTGCGGCGCATCCAAATTGGAACAGCGCCGTCGTCCGATTCGCCGCTCCGCTCGCCCTAAC
CAGAGCCAGTTGCCGGATCGCAACGACCGCGGCGGCAATATTGGCAGCCGCGGTGGTGATCGCTTCGCCGGCGCCGTCGGCCGCAACTGAGAACAGCAGCAGCAGCAGCA
TATCTGAACAAGAAGCAGAGACTACGCTGTCGAACATTCCGCAGACGCTTTCCGGCGAGTGCGCGGTGCCGAGCGACTGCAAGAGGGCGAGAATTCAGCGGCCGAAGTCG
AGGAAGGCAGAGTCGTGCACGATCAAGTGCGTGGGCACCTGCATTCGAGGCGGCGAAGGATCTCCCGGAGAAGGGCCATTGAACATCAGGAGG
mRNA sequenceShow/hide mRNA sequence
ATGATAAGTCATGTAAAAGGTCTATTTCCACGGCCGCTATCACCGCCTGTTGCGGCGCATCCAAATTGGAACAGCGCCGTCGTCCGATTCGCCGCTCCGCTCGCCCTAAC
CAGAGCCAGTTGCCGGATCGCAACGACCGCGGCGGCAATATTGGCAGCCGCGGTGGTGATCGCTTCGCCGGCGCCGTCGGCCGCAACTGAGAACAGCAGCAGCAGCAGCA
TATCTGAACAAGAAGCAGAGACTACGCTGTCGAACATTCCGCAGACGCTTTCCGGCGAGTGCGCGGTGCCGAGCGACTGCAAGAGGGCGAGAATTCAGCGGCCGAAGTCG
AGGAAGGCAGAGTCGTGCACGATCAAGTGCGTGGGCACCTGCATTCGAGGCGGCGAAGGATCTCCCGGAGAAGGGCCATTGAACATCAGGAGG
Protein sequenceShow/hide protein sequence
MISHVKGLFPRPLSPPVAAHPNWNSAVVRFAAPLALTRASCRIATTAAAILAAAVVIASPAPSAATENSSSSSISEQEAETTLSNIPQTLSGECAVPSDCKRARIQRPKS
RKAESCTIKCVGTCIRGGEGSPGEGPLNIRR