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MS019094 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019094
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRibonuclease H-like superfamily protein
Genome locationscaffold20:1417039..1417219
RNA-Seq ExpressionMS019094
SyntenyMS019094
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143317.1 uncharacterized protein LOC111013216 [Momordica charantia]8.9e-0745Show/hide
Query:  WISPPMHTWSLNSDASWSEAQQIAGLGW-LRDWKGEIILAGNKMVTNCGSIKKLEAGAVL
        W +PP + W LN+DASWSE +++ G+GW L D +GEI+LAGN  +     I  LE   ++
Subjt:  WISPPMHTWSLNSDASWSEAQQIAGLGW-LRDWKGEIILAGNKMVTNCGSIKKLEAGAVL
XP_022155262.1 uncharacterized protein LOC111022403 [Momordica charantia]7.0e-1253.33Show/hide
Query:  WISPPMHTWSLNSDASWSEAQQIAGLGW-LRDWKGEIILAGNKMVTNCGSIKKLEAGAVL
        W  PPMH W+LN+DASWS++    G+GW +R W G+I+LAGN+ V  C ++K LEA A+L
Subjt:  WISPPMHTWSLNSDASWSEAQQIAGLGW-LRDWKGEIILAGNKMVTNCGSIKKLEAGAVL
TrEMBL top hitse value%identityAlignment
A0A6J1CQG0 uncharacterized protein LOC1110132164.3e-0745Show/hide
Query:  WISPPMHTWSLNSDASWSEAQQIAGLGW-LRDWKGEIILAGNKMVTNCGSIKKLEAGAVL
        W +PP + W LN+DASWSE +++ G+GW L D +GEI+LAGN  +     I  LE   ++
Subjt:  WISPPMHTWSLNSDASWSEAQQIAGLGW-LRDWKGEIILAGNKMVTNCGSIKKLEAGAVL
A0A6J1DNV9 uncharacterized protein LOC1110224033.4e-1253.33Show/hide
Query:  WISPPMHTWSLNSDASWSEAQQIAGLGW-LRDWKGEIILAGNKMVTNCGSIKKLEAGAVL
        W  PPMH W+LN+DASWS++    G+GW +R W G+I+LAGN+ V  C ++K LEA A+L
Subjt:  WISPPMHTWSLNSDASWSEAQQIAGLGW-LRDWKGEIILAGNKMVTNCGSIKKLEAGAVL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G29090.1 Ribonuclease H-like superfamily protein3.4e-0435.09Show/hide
Query:  PPMHTW-SLNSDASWSEAQQIAGLGW-LRDWKGEIILAGNKMVTNCGSIKKLEAGAV
        PP H W   N+DA+W+   +  G+GW LR+ KGE+   G + +    S+ + E  A+
Subjt:  PPMHTW-SLNSDASWSEAQQIAGLGW-LRDWKGEIILAGNKMVTNCGSIKKLEAGAV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGGATTTCACCTCCAATGCATACTTGGTCTTTAAATTCAGACGCCTCTTGGTCAGAAGCTCAGCAAATCGCAGGATTGGGGTGGTTGAGAGATTGGAAGGGCGAAATCAT
CCTCGCCGGCAACAAAATGGTGACCAATTGTGGTAGCATCAAGAAATTGGAAGCGGGAGCAGTTCTC
mRNA sequenceShow/hide mRNA sequence
TGGATTTCACCTCCAATGCATACTTGGTCTTTAAATTCAGACGCCTCTTGGTCAGAAGCTCAGCAAATCGCAGGATTGGGGTGGTTGAGAGATTGGAAGGGCGAAATCAT
CCTCGCCGGCAACAAAATGGTGACCAATTGTGGTAGCATCAAGAAATTGGAAGCGGGAGCAGTTCTC
Protein sequenceShow/hide protein sequence
WISPPMHTWSLNSDASWSEAQQIAGLGWLRDWKGEIILAGNKMVTNCGSIKKLEAGAVL