CuGenDBv2

Gene ID	MS019098
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Kinesin light chain 3 isoform X1
Genome location	scaffold20:1451180..1451816
RNA-Seq Expression	MS019098
Synteny	MS019098
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component) GO:0005515 - protein binding (molecular function)
InterPro domains	IPR011990 - Tetratricopeptide-like helical domain superfamily IPR019734 - Tetratricopeptide repeat

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6606987.1 Nephrocystin-3, partial [Cucurbita argyrosperma subsp. sororia]

6.6e-56

84.17

Show/hide

Query:  AAIILGINSNPVFAKDTTFKPSSENGIEENDTIGLRKVEDGSVISNIHTSKWRVFTDTARDLFLQASIISFTFTKAERCFVSALQEAKEGFGERDPHVAS
        AAIILGINSNPV AKD   KPSSENGIEE+DTIGLRKVEDGSVISN+HTSKWRVFTD ARDLFLQ  +      +AER FVSA+QEAKEGFGERDPHVAS
Subjt:  AAIILGINSNPVFAKDTTFKPSSENGIEENDTIGLRKVEDGSVISNIHTSKWRVFTDTARDLFLQASIISFTFTKAERCFVSALQEAKEGFGERDPHVAS

Query:  AFNNLAELYRVMKRYDKAEPMYLEAINILEESYGSEDIR
        AFNNLAELYRV K +DKAEPMYLEAINILEESYGSEDIR
Subjt:  AFNNLAELYRVMKRYDKAEPMYLEAINILEESYGSEDIR

XP_022143432.1 kinesin light chain 1 isoform X1 [Momordica charantia]

1.9e-63

92.81

Show/hide

Query:  AAIILGINSNPVFAKDTTFKPSSENGIEENDTIGLRKVEDGSVISNIHTSKWRVFTDTARDLFLQASIISFTFTKAERCFVSALQEAKEGFGERDPHVAS
        AAIILGINSNPVFAKDTTFKPSSENGIEENDTIGLRKVEDGSVISNIHTSKWRVFTDTARDLFLQ  +      +AERCFVSALQEAKEGFGERDPHVAS
Subjt:  AAIILGINSNPVFAKDTTFKPSSENGIEENDTIGLRKVEDGSVISNIHTSKWRVFTDTARDLFLQASIISFTFTKAERCFVSALQEAKEGFGERDPHVAS

Query:  AFNNLAELYRVMKRYDKAEPMYLEAINILEESYGSEDIR
        AFNNLAELYRVMKRYDKAEPMYLEAINILEESYGSEDIR
Subjt:  AFNNLAELYRVMKRYDKAEPMYLEAINILEESYGSEDIR

XP_022143433.1 uncharacterized protein LOC111013309 isoform X2 [Momordica charantia]

1.9e-63

92.81

Show/hide

Query:  AAIILGINSNPVFAKDTTFKPSSENGIEENDTIGLRKVEDGSVISNIHTSKWRVFTDTARDLFLQASIISFTFTKAERCFVSALQEAKEGFGERDPHVAS
        AAIILGINSNPVFAKDTTFKPSSENGIEENDTIGLRKVEDGSVISNIHTSKWRVFTDTARDLFLQ  +      +AERCFVSALQEAKEGFGERDPHVAS
Subjt:  AAIILGINSNPVFAKDTTFKPSSENGIEENDTIGLRKVEDGSVISNIHTSKWRVFTDTARDLFLQASIISFTFTKAERCFVSALQEAKEGFGERDPHVAS

Query:  AFNNLAELYRVMKRYDKAEPMYLEAINILEESYGSEDIR
        AFNNLAELYRVMKRYDKAEPMYLEAINILEESYGSEDIR
Subjt:  AFNNLAELYRVMKRYDKAEPMYLEAINILEESYGSEDIR

XP_022143434.1 kinesin light chain 1 isoform X3 [Momordica charantia]

1.6e-62

92.7

Show/hide

Query:  IILGINSNPVFAKDTTFKPSSENGIEENDTIGLRKVEDGSVISNIHTSKWRVFTDTARDLFLQASIISFTFTKAERCFVSALQEAKEGFGERDPHVASAF
        IILGINSNPVFAKDTTFKPSSENGIEENDTIGLRKVEDGSVISNIHTSKWRVFTDTARDLFLQ  +      +AERCFVSALQEAKEGFGERDPHVASAF
Subjt:  IILGINSNPVFAKDTTFKPSSENGIEENDTIGLRKVEDGSVISNIHTSKWRVFTDTARDLFLQASIISFTFTKAERCFVSALQEAKEGFGERDPHVASAF

Query:  NNLAELYRVMKRYDKAEPMYLEAINILEESYGSEDIR
        NNLAELYRVMKRYDKAEPMYLEAINILEESYGSEDIR
Subjt:  NNLAELYRVMKRYDKAEPMYLEAINILEESYGSEDIR

XP_022997758.1 uncharacterized protein LOC111492620 [Cucurbita maxima]

6.6e-56

84.17

Show/hide

Query:  AAIILGINSNPVFAKDTTFKPSSENGIEENDTIGLRKVEDGSVISNIHTSKWRVFTDTARDLFLQASIISFTFTKAERCFVSALQEAKEGFGERDPHVAS
        AAIILGINSNPV AKD   KPSSENGIEE+DTIGLRKVEDGSVISN+HTSKWRVFTD ARDLFLQ  +      +AER FVSA+QEAKEGFGERDPHVAS
Subjt:  AAIILGINSNPVFAKDTTFKPSSENGIEENDTIGLRKVEDGSVISNIHTSKWRVFTDTARDLFLQASIISFTFTKAERCFVSALQEAKEGFGERDPHVAS

Query:  AFNNLAELYRVMKRYDKAEPMYLEAINILEESYGSEDIR
        AFNNLAELYRV K +DKAEPMYLEAINILEESYGSEDIR
Subjt:  AFNNLAELYRVMKRYDKAEPMYLEAINILEESYGSEDIR

TrEMBL top hits

e value

%identity

Alignment

A0A6J1CPA5 kinesin light chain 1 isoform X3

7.8e-63

92.7

Show/hide

Query:  IILGINSNPVFAKDTTFKPSSENGIEENDTIGLRKVEDGSVISNIHTSKWRVFTDTARDLFLQASIISFTFTKAERCFVSALQEAKEGFGERDPHVASAF
        IILGINSNPVFAKDTTFKPSSENGIEENDTIGLRKVEDGSVISNIHTSKWRVFTDTARDLFLQ  +      +AERCFVSALQEAKEGFGERDPHVASAF
Subjt:  IILGINSNPVFAKDTTFKPSSENGIEENDTIGLRKVEDGSVISNIHTSKWRVFTDTARDLFLQASIISFTFTKAERCFVSALQEAKEGFGERDPHVASAF

Query:  NNLAELYRVMKRYDKAEPMYLEAINILEESYGSEDIR
        NNLAELYRVMKRYDKAEPMYLEAINILEESYGSEDIR
Subjt:  NNLAELYRVMKRYDKAEPMYLEAINILEESYGSEDIR

A0A6J1CQP6 uncharacterized protein LOC111013309 isoform X2

9.2e-64

92.81

Show/hide

Query:  AAIILGINSNPVFAKDTTFKPSSENGIEENDTIGLRKVEDGSVISNIHTSKWRVFTDTARDLFLQASIISFTFTKAERCFVSALQEAKEGFGERDPHVAS
        AAIILGINSNPVFAKDTTFKPSSENGIEENDTIGLRKVEDGSVISNIHTSKWRVFTDTARDLFLQ  +      +AERCFVSALQEAKEGFGERDPHVAS
Subjt:  AAIILGINSNPVFAKDTTFKPSSENGIEENDTIGLRKVEDGSVISNIHTSKWRVFTDTARDLFLQASIISFTFTKAERCFVSALQEAKEGFGERDPHVAS

Query:  AFNNLAELYRVMKRYDKAEPMYLEAINILEESYGSEDIR
        AFNNLAELYRVMKRYDKAEPMYLEAINILEESYGSEDIR
Subjt:  AFNNLAELYRVMKRYDKAEPMYLEAINILEESYGSEDIR

A0A6J1CQT4 kinesin light chain 1 isoform X1

9.2e-64

92.81

Show/hide

Query:  AAIILGINSNPVFAKDTTFKPSSENGIEENDTIGLRKVEDGSVISNIHTSKWRVFTDTARDLFLQASIISFTFTKAERCFVSALQEAKEGFGERDPHVAS
        AAIILGINSNPVFAKDTTFKPSSENGIEENDTIGLRKVEDGSVISNIHTSKWRVFTDTARDLFLQ  +      +AERCFVSALQEAKEGFGERDPHVAS
Subjt:  AAIILGINSNPVFAKDTTFKPSSENGIEENDTIGLRKVEDGSVISNIHTSKWRVFTDTARDLFLQASIISFTFTKAERCFVSALQEAKEGFGERDPHVAS

Query:  AFNNLAELYRVMKRYDKAEPMYLEAINILEESYGSEDIR
        AFNNLAELYRVMKRYDKAEPMYLEAINILEESYGSEDIR
Subjt:  AFNNLAELYRVMKRYDKAEPMYLEAINILEESYGSEDIR

A0A6J1G9U8 uncharacterized protein LOC111452120

3.2e-56

84.17

Show/hide

Query:  AAIILGINSNPVFAKDTTFKPSSENGIEENDTIGLRKVEDGSVISNIHTSKWRVFTDTARDLFLQASIISFTFTKAERCFVSALQEAKEGFGERDPHVAS
        AAIILGINSNPV AKD   KPSSENGIEE+DTIGLRKVEDGSVISN+HTSKWRVFTD ARDLFLQ  +      +AER FVSA+QEAKEGFGERDPHVAS
Subjt:  AAIILGINSNPVFAKDTTFKPSSENGIEENDTIGLRKVEDGSVISNIHTSKWRVFTDTARDLFLQASIISFTFTKAERCFVSALQEAKEGFGERDPHVAS

Query:  AFNNLAELYRVMKRYDKAEPMYLEAINILEESYGSEDIR
        AFNNLAELYRV K +DKAEPMYLEAINILEESYGSEDIR
Subjt:  AFNNLAELYRVMKRYDKAEPMYLEAINILEESYGSEDIR

A0A6J1KEU5 uncharacterized protein LOC111492620

3.2e-56

84.17

Show/hide

Query:  AAIILGINSNPVFAKDTTFKPSSENGIEENDTIGLRKVEDGSVISNIHTSKWRVFTDTARDLFLQASIISFTFTKAERCFVSALQEAKEGFGERDPHVAS
        AAIILGINSNPV AKD   KPSSENGIEE+DTIGLRKVEDGSVISN+HTSKWRVFTD ARDLFLQ  +      +AER FVSA+QEAKEGFGERDPHVAS
Subjt:  AAIILGINSNPVFAKDTTFKPSSENGIEENDTIGLRKVEDGSVISNIHTSKWRVFTDTARDLFLQASIISFTFTKAERCFVSALQEAKEGFGERDPHVAS

Query:  AFNNLAELYRVMKRYDKAEPMYLEAINILEESYGSEDIR
        AFNNLAELYRV K +DKAEPMYLEAINILEESYGSEDIR
Subjt:  AFNNLAELYRVMKRYDKAEPMYLEAINILEESYGSEDIR

SwissProt top hits

e value

%identity

Alignment

A5HK05 Amyloid protein-binding protein 2

6.5e-06

39.68

Show/hide

Query:  KAERCFVSALQEAKEGFGERDPHVASAFNNLAELYRVMKRYDKAEPMYLEAINILEESYGSED
        +A    +S+LQ AK+ FGE +   A  + NL  LY+ M+++ +AE M+++AI I E+  G ED
Subjt:  KAERCFVSALQEAKEGFGERDPHVASAFNNLAELYRVMKRYDKAEPMYLEAINILEESYGSED

Q6AZT7 Nephrocystin-3

4.6e-04

41.67

Show/hide

Query:  KAERCFVSALQEAKEGFGERDPHVASAFNNLAELYRVMKRYDKAEPMYLEAINILEESYG
        KA   +  A+   ++ FG + P VA+A  NLA LY  MK+ D A P+Y  A+ I E+S G
Subjt:  KAERCFVSALQEAKEGFGERDPHVASAFNNLAELYRVMKRYDKAEPMYLEAINILEESYG

Q7Z494 Nephrocystin-3

3.6e-04

Show/hide

Query:  KAERCFVSALQEAKEGFGERDPHVASAFNNLAELYRVMKRYDKAEPMYLEAINILEESYG
        KA   +  A++  ++ FG + P VA+A  NLA LY  MK++ +A P+Y  A+ I E+S G
Subjt:  KAERCFVSALQEAKEGFGERDPHVASAFNNLAELYRVMKRYDKAEPMYLEAINILEESYG

Q92624 Amyloid protein-binding protein 2

6.5e-06

39.68

Show/hide

Query:  KAERCFVSALQEAKEGFGERDPHVASAFNNLAELYRVMKRYDKAEPMYLEAINILEESYGSED
        +A    +S+LQ AK+ FGE +   A  + NL  LY+ M+++ +AE M+++AI I E+  G ED
Subjt:  KAERCFVSALQEAKEGFGERDPHVASAFNNLAELYRVMKRYDKAEPMYLEAINILEESYGSED

Q9DAX9 Amyloid protein-binding protein 2

6.5e-06

39.68

Show/hide

Query:  KAERCFVSALQEAKEGFGERDPHVASAFNNLAELYRVMKRYDKAEPMYLEAINILEESYGSED
        +A    +S+LQ AK+ FGE +   A  + NL  LY+ M+++ +AE M+++AI I E+  G ED
Subjt:  KAERCFVSALQEAKEGFGERDPHVASAFNNLAELYRVMKRYDKAEPMYLEAINILEESYGSED

Arabidopsis top hits

e value

%identity

Alignment

AT5G37590.1 Tetratricopeptide repeat (TPR)-like superfamily protein

8.0e-44

61.27

Show/hide

Query:  LCGAAIILGINSNPVFAKDTTFKPSSENGIEENDTIGLRKVEDGSVISNIHTSKWRVFTDTARDLFLQASIISFTFTKAERCFVSALQEAKEGFGERDPH
        L G A ILG   N V A+D + K  S + ++E+   GL K+EDGSV+SNIHTSKWRVFTD+ RD F Q  +       AER F SA+QEAKEGFGE+DPH
Subjt:  LCGAAIILGINSNPVFAKDTTFKPSSENGIEENDTIGLRKVEDGSVISNIHTSKWRVFTDTARDLFLQASIISFTFTKAERCFVSALQEAKEGFGERDPH

Query:  VASAFNNLAELYRVMKRYDKAEPMYLEAINILEESYGSEDIR
        VASA NNLAELYRV K +DKAEP+YLEA++ILEE YG +D+R
Subjt:  VASAFNNLAELYRVMKRYDKAEPMYLEAINILEESYGSEDIR

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

CTCTGTGGTGCAGCTATAATACTTGGAATAAACTCAAATCCTGTCTTTGCTAAGGACACAACATTTAAGCCAAGTTCTGAAAATGGTATTGAAGAGAATGACACTATTGG
ACTACGCAAAGTGGAGGATGGTTCTGTCATATCAAATATACATACTTCAAAGTGGAGAGTTTTTACAGATACTGCTCGGGACTTGTTTCTGCAGGCAAGCATTATTTCTT
TTACCTTCACTAAAGCTGAAAGATGTTTCGTTTCTGCGCTTCAAGAAGCTAAAGAAGGTTTTGGGGAGAGGGATCCTCATGTTGCATCTGCCTTCAACAATCTGGCAGAA
TTGTATAGAGTCATGAAAAGATATGACAAAGCAGAACCAATGTATTTGGAAGCCATCAACATATTGGAGGAATCCTATGGCTCTGAAGATATAAGG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

LCGAAIILGINSNPVFAKDTTFKPSSENGIEENDTIGLRKVEDGSVISNIHTSKWRVFTDTARDLFLQASIISFTFTKAERCFVSALQEAKEGFGERDPHVASAFNNLAE
LYRVMKRYDKAEPMYLEAINILEESYGSEDIR

MS019098 (gene) of Bitter gourd (TR) v1 genome