; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS019100 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019100
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionagamous-like MADS-box protein AGL14
Genome locationscaffold20:1480877..1481332
RNA-Seq ExpressionMS019100
SyntenyMS019100
Gene Ontology termsGO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR002100 - Transcription factor, MADS-box
IPR036879 - Transcription factor, MADS-box superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143271.1 uncharacterized protein LOC111013182 isoform X1 [Momordica charantia]5.4e-4879.53Show/hide
Query:  MKKAFELSTLCDVRTCVLIHGPAPPQDGDRSAVESHTWPPNREEIEGIIRAYKTNYLRKPSMKSFGLYDFFSDRMKKIEKERAKF---SEEIKYAGWDER
        MKKAFELSTLCDVRTCVLIHGPAPPQDGD SAVESHTWP NREEIEGIIRAYKT+Y +KP MKSF LY +FSDRMKKIE ERAKF   +E+IK   WDER
Subjt:  MKKAFELSTLCDVRTCVLIHGPAPPQDGDRSAVESHTWPPNREEIEGIIRAYKTNYLRKPSMKSFGLYDFFSDRMKKIEKERAKF---SEEIKYAGWDER

Query:  LNCLSEQQLRLFMDNLGSKIEAAEGMI
        L CLS  QLRL M++LGSK E AEGMI
Subjt:  LNCLSEQQLRLFMDNLGSKIEAAEGMI

XP_022143272.1 uncharacterized protein LOC111013182 isoform X2 [Momordica charantia]5.4e-4879.53Show/hide
Query:  MKKAFELSTLCDVRTCVLIHGPAPPQDGDRSAVESHTWPPNREEIEGIIRAYKTNYLRKPSMKSFGLYDFFSDRMKKIEKERAKF---SEEIKYAGWDER
        MKKAFELSTLCDVRTCVLIHGPAPPQDGD SAVESHTWP NREEIEGIIRAYKT+Y +KP MKSF LY +FSDRMKKIE ERAKF   +E+IK   WDER
Subjt:  MKKAFELSTLCDVRTCVLIHGPAPPQDGDRSAVESHTWPPNREEIEGIIRAYKTNYLRKPSMKSFGLYDFFSDRMKKIEKERAKF---SEEIKYAGWDER

Query:  LNCLSEQQLRLFMDNLGSKIEAAEGMI
        L CLS  QLRL M++LGSK E AEGMI
Subjt:  LNCLSEQQLRLFMDNLGSKIEAAEGMI

XP_022143273.1 uncharacterized protein LOC111013182 isoform X3 [Momordica charantia]5.4e-4879.53Show/hide
Query:  MKKAFELSTLCDVRTCVLIHGPAPPQDGDRSAVESHTWPPNREEIEGIIRAYKTNYLRKPSMKSFGLYDFFSDRMKKIEKERAKF---SEEIKYAGWDER
        MKKAFELSTLCDVRTCVLIHGPAPPQDGD SAVESHTWP NREEIEGIIRAYKT+Y +KP MKSF LY +FSDRMKKIE ERAKF   +E+IK   WDER
Subjt:  MKKAFELSTLCDVRTCVLIHGPAPPQDGDRSAVESHTWPPNREEIEGIIRAYKTNYLRKPSMKSFGLYDFFSDRMKKIEKERAKF---SEEIKYAGWDER

Query:  LNCLSEQQLRLFMDNLGSKIEAAEGMI
        L CLS  QLRL M++LGSK E AEGMI
Subjt:  LNCLSEQQLRLFMDNLGSKIEAAEGMI

XP_022143274.1 uncharacterized protein LOC111013182 isoform X4 [Momordica charantia]5.4e-4879.53Show/hide
Query:  MKKAFELSTLCDVRTCVLIHGPAPPQDGDRSAVESHTWPPNREEIEGIIRAYKTNYLRKPSMKSFGLYDFFSDRMKKIEKERAKF---SEEIKYAGWDER
        MKKAFELSTLCDVRTCVLIHGPAPPQDGD SAVESHTWP NREEIEGIIRAYKT+Y +KP MKSF LY +FSDRMKKIE ERAKF   +E+IK   WDER
Subjt:  MKKAFELSTLCDVRTCVLIHGPAPPQDGDRSAVESHTWPPNREEIEGIIRAYKTNYLRKPSMKSFGLYDFFSDRMKKIEKERAKF---SEEIKYAGWDER

Query:  LNCLSEQQLRLFMDNLGSKIEAAEGMI
        L CLS  QLRL M++LGSK E AEGMI
Subjt:  LNCLSEQQLRLFMDNLGSKIEAAEGMI

XP_022143403.1 uncharacterized protein LOC111013282 [Momordica charantia]3.8e-7898.68Show/hide
Query:  MGRGKLSLKLISSHKSRTATFRKRTKSLMKKAFELSTLCDVRTCVLIHGPAPPQDGDRSAVESHTWPPNREEIEGIIRAYKTNYLRKPSMKSFGLYDFFS
        MGRGKLSLKLISSHKSRTATFRKRTKSLMKKAFELSTLCDVRTCVLIHGPAPPQDGDRS VESHTWPPNREEIEGIIRAYKTNYLRKPSMKSFGLYDFFS
Subjt:  MGRGKLSLKLISSHKSRTATFRKRTKSLMKKAFELSTLCDVRTCVLIHGPAPPQDGDRSAVESHTWPPNREEIEGIIRAYKTNYLRKPSMKSFGLYDFFS

Query:  DRMKKIEKERAKFSEEIKYAGWDERLNCLSEQQLRLFMDNLGSKIEAAEGMI
         RMKKIEKERAKFSEEIKYAGWDERLNCLSEQQLRLFMDNLGSKIEAAEGMI
Subjt:  DRMKKIEKERAKFSEEIKYAGWDERLNCLSEQQLRLFMDNLGSKIEAAEGMI

TrEMBL top hitse value%identityAlignment
A0A6J1CNU9 uncharacterized protein LOC111013182 isoform X42.6e-4879.53Show/hide
Query:  MKKAFELSTLCDVRTCVLIHGPAPPQDGDRSAVESHTWPPNREEIEGIIRAYKTNYLRKPSMKSFGLYDFFSDRMKKIEKERAKF---SEEIKYAGWDER
        MKKAFELSTLCDVRTCVLIHGPAPPQDGD SAVESHTWP NREEIEGIIRAYKT+Y +KP MKSF LY +FSDRMKKIE ERAKF   +E+IK   WDER
Subjt:  MKKAFELSTLCDVRTCVLIHGPAPPQDGDRSAVESHTWPPNREEIEGIIRAYKTNYLRKPSMKSFGLYDFFSDRMKKIEKERAKF---SEEIKYAGWDER

Query:  LNCLSEQQLRLFMDNLGSKIEAAEGMI
        L CLS  QLRL M++LGSK E AEGMI
Subjt:  LNCLSEQQLRLFMDNLGSKIEAAEGMI

A0A6J1CPS5 uncharacterized protein LOC111013182 isoform X12.6e-4879.53Show/hide
Query:  MKKAFELSTLCDVRTCVLIHGPAPPQDGDRSAVESHTWPPNREEIEGIIRAYKTNYLRKPSMKSFGLYDFFSDRMKKIEKERAKF---SEEIKYAGWDER
        MKKAFELSTLCDVRTCVLIHGPAPPQDGD SAVESHTWP NREEIEGIIRAYKT+Y +KP MKSF LY +FSDRMKKIE ERAKF   +E+IK   WDER
Subjt:  MKKAFELSTLCDVRTCVLIHGPAPPQDGDRSAVESHTWPPNREEIEGIIRAYKTNYLRKPSMKSFGLYDFFSDRMKKIEKERAKF---SEEIKYAGWDER

Query:  LNCLSEQQLRLFMDNLGSKIEAAEGMI
        L CLS  QLRL M++LGSK E AEGMI
Subjt:  LNCLSEQQLRLFMDNLGSKIEAAEGMI

A0A6J1CQB2 uncharacterized protein LOC111013182 isoform X32.6e-4879.53Show/hide
Query:  MKKAFELSTLCDVRTCVLIHGPAPPQDGDRSAVESHTWPPNREEIEGIIRAYKTNYLRKPSMKSFGLYDFFSDRMKKIEKERAKF---SEEIKYAGWDER
        MKKAFELSTLCDVRTCVLIHGPAPPQDGD SAVESHTWP NREEIEGIIRAYKT+Y +KP MKSF LY +FSDRMKKIE ERAKF   +E+IK   WDER
Subjt:  MKKAFELSTLCDVRTCVLIHGPAPPQDGDRSAVESHTWPPNREEIEGIIRAYKTNYLRKPSMKSFGLYDFFSDRMKKIEKERAKF---SEEIKYAGWDER

Query:  LNCLSEQQLRLFMDNLGSKIEAAEGMI
        L CLS  QLRL M++LGSK E AEGMI
Subjt:  LNCLSEQQLRLFMDNLGSKIEAAEGMI

A0A6J1CQB5 uncharacterized protein LOC111013182 isoform X22.6e-4879.53Show/hide
Query:  MKKAFELSTLCDVRTCVLIHGPAPPQDGDRSAVESHTWPPNREEIEGIIRAYKTNYLRKPSMKSFGLYDFFSDRMKKIEKERAKF---SEEIKYAGWDER
        MKKAFELSTLCDVRTCVLIHGPAPPQDGD SAVESHTWP NREEIEGIIRAYKT+Y +KP MKSF LY +FSDRMKKIE ERAKF   +E+IK   WDER
Subjt:  MKKAFELSTLCDVRTCVLIHGPAPPQDGDRSAVESHTWPPNREEIEGIIRAYKTNYLRKPSMKSFGLYDFFSDRMKKIEKERAKF---SEEIKYAGWDER

Query:  LNCLSEQQLRLFMDNLGSKIEAAEGMI
        L CLS  QLRL M++LGSK E AEGMI
Subjt:  LNCLSEQQLRLFMDNLGSKIEAAEGMI

A0A6J1CQM2 uncharacterized protein LOC1110132821.9e-7898.68Show/hide
Query:  MGRGKLSLKLISSHKSRTATFRKRTKSLMKKAFELSTLCDVRTCVLIHGPAPPQDGDRSAVESHTWPPNREEIEGIIRAYKTNYLRKPSMKSFGLYDFFS
        MGRGKLSLKLISSHKSRTATFRKRTKSLMKKAFELSTLCDVRTCVLIHGPAPPQDGDRS VESHTWPPNREEIEGIIRAYKTNYLRKPSMKSFGLYDFFS
Subjt:  MGRGKLSLKLISSHKSRTATFRKRTKSLMKKAFELSTLCDVRTCVLIHGPAPPQDGDRSAVESHTWPPNREEIEGIIRAYKTNYLRKPSMKSFGLYDFFS

Query:  DRMKKIEKERAKFSEEIKYAGWDERLNCLSEQQLRLFMDNLGSKIEAAEGMI
         RMKKIEKERAKFSEEIKYAGWDERLNCLSEQQLRLFMDNLGSKIEAAEGMI
Subjt:  DRMKKIEKERAKFSEEIKYAGWDERLNCLSEQQLRLFMDNLGSKIEAAEGMI

SwissProt top hitse value%identityAlignment
Q38694 Agamous-like MADS-box protein AGL9 homolog1.5e-0551.06Show/hide
Query:  MGRGKLSLKLISSHKSRTATFRKRTKSLMKKAFELSTLCDVRTCVLI
        MGRG++ LK+I +  +R  TF KR K L+KKA+ELS LCD    ++I
Subjt:  MGRGKLSLKLISSHKSRTATFRKRTKSLMKKAFELSTLCDVRTCVLI

Q9FIM0 Agamous-like MADS-box protein AGL825.9e-1334.93Show/hide
Query:  LSLKLISSHKSRTATFRKRTKSLMKKAFELSTLCDVRTCVLIHGPAPPQDGDRSAVESHTWPPNREEIEGIIRAYKTNYLRKPSMKSFGLYDFFSDRMK-
        + L+ I++ K+R  T++KR  SL KKA E STLC V TC++++GP    D   S  E   WP +  ++  IIR YK + +     K   +  F +D  K 
Subjt:  LSLKLISSHKSRTATFRKRTKSLMKKAFELSTLCDVRTCVLIHGPAPPQDGDRSAVESHTWPPNREEIEGIIRAYKTNYLRKPSMKSFGLYDFFSDRMK-

Query:  --KIEKERAKFSEEIKYAGWDERLNCLSEQQLRLFMDNLGSKIEAA
           + K+R K   E KY+ W+E+L+  S +QL      + SK+  A
Subjt:  --KIEKERAKFSEEIKYAGWDERLNCLSEQQLRLFMDNLGSKIEAA

Q9FIX0 Agamous-like MADS-box protein AGL818.8e-0933.05Show/hide
Query:  SSHKSRTATFRKRTKSLMKKAFELSTLCDVRTCVLIHGPAPPQDGDRSAVESHTWPPNREEIEGIIRAYKTNYLRKPSMKSFGLYDFFSDRMKKIEKERA
        SS+   + +   R +++ KKA EL TLCD+  CV+ +GP    DG     E  TWPP RE++E I   Y          KS  LYDF + +     K++ 
Subjt:  SSHKSRTATFRKRTKSLMKKAFELSTLCDVRTCVLIHGPAPPQDGDRSAVESHTWPPNREEIEGIIRAYKTNYLRKPSMKSFGLYDFFSDRMKKIEKERA

Query:  KFSEEIKYAGWDERLNCL
           ++ K    D+   CL
Subjt:  KFSEEIKYAGWDERLNCL

Q9FJK3 Agamous-like MADS-box protein AGL808.2e-0737.8Show/hide
Query:  MGRGKLSLKLISSHKSRTATFRKRTKSLMKKAFELSTLCDVRTCVLIHGPAPPQDGDRSAVESHTWPPNREEIEGIIRAYKT
        M R K+ L  IS+  SR ATF+KR K LMKK  ELSTLC +  C +I+ P               WP N   ++ ++  ++T
Subjt:  MGRGKLSLKLISSHKSRTATFRKRTKSLMKKAFELSTLCDVRTCVLIHGPAPPQDGDRSAVESHTWPPNREEIEGIIRAYKT

Q9LSB2 Agamous-like MADS-box protein AGL1036.7e-0933.33Show/hide
Query:  SRTATFRKRTKSLMKKAFELSTLCDVRTCVLIHGPAPPQDGDRSAVESHTWPPNREEIEGIIRAYKTNYLRKPSMKSFGLYDFF----SDRMKKIEKERA
        SR  +  KR +++ KKA ELS LCD+  CV+ +G         S  E  TWP  RE+++ I R Y      K    S  L++F      D  +K EK++ 
Subjt:  SRTATFRKRTKSLMKKAFELSTLCDVRTCVLIHGPAPPQDGDRSAVESHTWPPNREEIEGIIRAYKTNYLRKPSMKSFGLYDFF----SDRMKKIEKERA

Query:  KFSE--EIKYAGWDERLNCLSEQQLRLFMDNL
        K     ++KY  WD R +  S +QL   + +L
Subjt:  KFSE--EIKYAGWDERLNCLSEQQLRLFMDNL

Arabidopsis top hitse value%identityAlignment
AT3G18650.1 AGAMOUS-like 1034.8e-1033.33Show/hide
Query:  SRTATFRKRTKSLMKKAFELSTLCDVRTCVLIHGPAPPQDGDRSAVESHTWPPNREEIEGIIRAYKTNYLRKPSMKSFGLYDFF----SDRMKKIEKERA
        SR  +  KR +++ KKA ELS LCD+  CV+ +G         S  E  TWP  RE+++ I R Y      K    S  L++F      D  +K EK++ 
Subjt:  SRTATFRKRTKSLMKKAFELSTLCDVRTCVLIHGPAPPQDGDRSAVESHTWPPNREEIEGIIRAYKTNYLRKPSMKSFGLYDFF----SDRMKKIEKERA

Query:  KFSE--EIKYAGWDERLNCLSEQQLRLFMDNL
        K     ++KY  WD R +  S +QL   + +L
Subjt:  KFSE--EIKYAGWDERLNCLSEQQLRLFMDNL

AT5G39750.1 AGAMOUS-like 816.2e-1033.05Show/hide
Query:  SSHKSRTATFRKRTKSLMKKAFELSTLCDVRTCVLIHGPAPPQDGDRSAVESHTWPPNREEIEGIIRAYKTNYLRKPSMKSFGLYDFFSDRMKKIEKERA
        SS+   + +   R +++ KKA EL TLCD+  CV+ +GP    DG     E  TWPP RE++E I   Y          KS  LYDF + +     K++ 
Subjt:  SSHKSRTATFRKRTKSLMKKAFELSTLCDVRTCVLIHGPAPPQDGDRSAVESHTWPPNREEIEGIIRAYKTNYLRKPSMKSFGLYDFFSDRMKKIEKERA

Query:  KFSEEIKYAGWDERLNCL
           ++ K    D+   CL
Subjt:  KFSEEIKYAGWDERLNCL

AT5G39810.1 AGAMOUS-like 983.1e-0935.35Show/hide
Query:  SSHKSRTATFRKRTKSLMKKAFELSTLCDVRTCVLIHGPAPPQDGDRSAVESHTWPPNREEIEGIIRAYKTNYLRKPSMKSFGLYDFFSDRMKKIEKER
        SS+   + +   R +++ +KA EL TLCD+  CV+ +GP    DG     E  TWPP RE++E I   Y          KS  LYDF + +  K   E+
Subjt:  SSHKSRTATFRKRTKSLMKKAFELSTLCDVRTCVLIHGPAPPQDGDRSAVESHTWPPNREEIEGIIRAYKTNYLRKPSMKSFGLYDFFSDRMKKIEKER

AT5G55690.1 MADS-box transcription factor family protein4.6e-1330.41Show/hide
Query:  MGRGKLSLKLISSHKSRTATFRKRTKSLMKKAFELSTLCDVRTCVLIHGPAPPQDGDRSAVESHTWPPNREEIEGIIRAYKTNYLRKPSMKSFGLYDFFS
        MGR  + +  I++ K+R  T++KR   L KKA E STLC V TCV+++GP+  + GD   +E   WP +  ++  I+  Y+ +       K++ + +   
Subjt:  MGRGKLSLKLISSHKSRTATFRKRTKSLMKKAFELSTLCDVRTCVLIHGPAPPQDGDRSAVESHTWPPNREEIEGIIRAYKTNYLRKPSMKSFGLYDFFS

Query:  DRMKKIEKERAKFSEEIKYAGWDERLNCLSEQQLRLFMDNLGSKIEAA
            K+EK     +   KY  WD++L+  S   L      + +KI+ A
Subjt:  DRMKKIEKERAKFSEEIKYAGWDERLNCLSEQQLRLFMDNLGSKIEAA

AT5G58890.1 AGAMOUS-like 824.2e-1434.93Show/hide
Query:  LSLKLISSHKSRTATFRKRTKSLMKKAFELSTLCDVRTCVLIHGPAPPQDGDRSAVESHTWPPNREEIEGIIRAYKTNYLRKPSMKSFGLYDFFSDRMK-
        + L+ I++ K+R  T++KR  SL KKA E STLC V TC++++GP    D   S  E   WP +  ++  IIR YK + +     K   +  F +D  K 
Subjt:  LSLKLISSHKSRTATFRKRTKSLMKKAFELSTLCDVRTCVLIHGPAPPQDGDRSAVESHTWPPNREEIEGIIRAYKTNYLRKPSMKSFGLYDFFSDRMK-

Query:  --KIEKERAKFSEEIKYAGWDERLNCLSEQQLRLFMDNLGSKIEAA
           + K+R K   E KY+ W+E+L+  S +QL      + SK+  A
Subjt:  --KIEKERAKFSEEIKYAGWDERLNCLSEQQLRLFMDNLGSKIEAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCAGAGGAAAATTGAGCCTGAAGCTGATTTCGTCTCACAAATCTCGCACTGCAACATTCCGCAAGAGAACCAAGAGTTTGATGAAGAAAGCCTTCGAGCTATCCAC
GCTCTGCGATGTCCGGACCTGCGTTTTGATCCATGGCCCTGCTCCTCCACAAGATGGTGATCGCTCGGCAGTGGAATCCCACACTTGGCCTCCCAATCGCGAAGAAATCG
AAGGTATTATCCGGGCCTATAAGACTAATTATTTGCGGAAACCATCGATGAAGTCTTTTGGTTTGTATGATTTTTTCTCGGATCGTATGAAGAAAATCGAAAAAGAGAGG
GCTAAATTTAGTGAAGAAATCAAGTATGCGGGGTGGGACGAGCGGCTTAATTGTTTATCCGAACAGCAGCTGCGGTTGTTTATGGATAATTTGGGTTCGAAGATTGAAGC
TGCAGAGGGAATGATT
mRNA sequenceShow/hide mRNA sequence
ATGGGCAGAGGAAAATTGAGCCTGAAGCTGATTTCGTCTCACAAATCTCGCACTGCAACATTCCGCAAGAGAACCAAGAGTTTGATGAAGAAAGCCTTCGAGCTATCCAC
GCTCTGCGATGTCCGGACCTGCGTTTTGATCCATGGCCCTGCTCCTCCACAAGATGGTGATCGCTCGGCAGTGGAATCCCACACTTGGCCTCCCAATCGCGAAGAAATCG
AAGGTATTATCCGGGCCTATAAGACTAATTATTTGCGGAAACCATCGATGAAGTCTTTTGGTTTGTATGATTTTTTCTCGGATCGTATGAAGAAAATCGAAAAAGAGAGG
GCTAAATTTAGTGAAGAAATCAAGTATGCGGGGTGGGACGAGCGGCTTAATTGTTTATCCGAACAGCAGCTGCGGTTGTTTATGGATAATTTGGGTTCGAAGATTGAAGC
TGCAGAGGGAATGATT
Protein sequenceShow/hide protein sequence
MGRGKLSLKLISSHKSRTATFRKRTKSLMKKAFELSTLCDVRTCVLIHGPAPPQDGDRSAVESHTWPPNREEIEGIIRAYKTNYLRKPSMKSFGLYDFFSDRMKKIEKER
AKFSEEIKYAGWDERLNCLSEQQLRLFMDNLGSKIEAAEGMI