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MS019104 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019104
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNicastrin
Genome locationscaffold20:1493541..1494225
RNA-Seq ExpressionMS019104
SyntenyMS019104
Gene Ontology termsGO:0016485 - protein processing (biological process)
GO:0005887 - integral component of plasma membrane (cellular component)
InterPro domainsIPR008710 - Nicastrin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047366.1 nicastrin isoform X1 [Cucumis melo var. makuwa]2.9e-4883.06Show/hide
Query:  QASSKNVKNRKAYTSNVAEFDLVIQTTKAGTHSSVSCLKEETCLPLGGYSVWTLLPPINISSSDQSKPTILTVASMDSASFFLDKSIGADSPISDLISLL
        QA+SKNVK++K Y SNVAEFDLV+QTTKAGTHSS+SCLKEETCLPLGGYSVW+ LPPIN SSSDQSKP ILTVASMDSASFF DKSIGADSPIS LI+LL
Subjt:  QASSKNVKNRKAYTSNVAEFDLVIQTTKAGTHSSVSCLKEETCLPLGGYSVWTLLPPINISSSDQSKPTILTVASMDSASFFLDKSIGADSPISDLISLL

Query:  VAVDAVSHVDGLDDLHKQVLMKAF
         AVDA+SHVDGLDDLHKQ++   F
Subjt:  VAVDAVSHVDGLDDLHKQVLMKAF

XP_004140732.1 nicastrin [Cucumis sativus]6.4e-4882.26Show/hide
Query:  QASSKNVKNRKAYTSNVAEFDLVIQTTKAGTHSSVSCLKEETCLPLGGYSVWTLLPPINISSSDQSKPTILTVASMDSASFFLDKSIGADSPISDLISLL
        +A+SKNVK++K Y SNVAEFDLV+QTTKAGTHSS+SCLKEETCLPLGGYSVW+ LPPIN SSSDQSKP ILTVASMDSASFF DKSIGADSPIS LI+LL
Subjt:  QASSKNVKNRKAYTSNVAEFDLVIQTTKAGTHSSVSCLKEETCLPLGGYSVWTLLPPINISSSDQSKPTILTVASMDSASFFLDKSIGADSPISDLISLL

Query:  VAVDAVSHVDGLDDLHKQVLMKAF
         AVDA+SHVDGLDDLHKQ++   F
Subjt:  VAVDAVSHVDGLDDLHKQVLMKAF

XP_008457115.1 PREDICTED: nicastrin isoform X1 [Cucumis melo]6.4e-4882.26Show/hide
Query:  QASSKNVKNRKAYTSNVAEFDLVIQTTKAGTHSSVSCLKEETCLPLGGYSVWTLLPPINISSSDQSKPTILTVASMDSASFFLDKSIGADSPISDLISLL
        +A+SKNVK++K Y SNVAEFDLV+QTTKAGTHSS+SCLKEETCLPLGGYSVW+ LPPIN SSSDQSKP ILTVASMDSASFF DKSIGADSPIS LI+LL
Subjt:  QASSKNVKNRKAYTSNVAEFDLVIQTTKAGTHSSVSCLKEETCLPLGGYSVWTLLPPINISSSDQSKPTILTVASMDSASFFLDKSIGADSPISDLISLL

Query:  VAVDAVSHVDGLDDLHKQVLMKAF
         AVDA+SHVDGLDDLHKQ++   F
Subjt:  VAVDAVSHVDGLDDLHKQVLMKAF

XP_008457117.1 PREDICTED: nicastrin isoform X2 [Cucumis melo]6.4e-4882.26Show/hide
Query:  QASSKNVKNRKAYTSNVAEFDLVIQTTKAGTHSSVSCLKEETCLPLGGYSVWTLLPPINISSSDQSKPTILTVASMDSASFFLDKSIGADSPISDLISLL
        +A+SKNVK++K Y SNVAEFDLV+QTTKAGTHSS+SCLKEETCLPLGGYSVW+ LPPIN SSSDQSKP ILTVASMDSASFF DKSIGADSPIS LI+LL
Subjt:  QASSKNVKNRKAYTSNVAEFDLVIQTTKAGTHSSVSCLKEETCLPLGGYSVWTLLPPINISSSDQSKPTILTVASMDSASFFLDKSIGADSPISDLISLL

Query:  VAVDAVSHVDGLDDLHKQVLMKAF
         AVDA+SHVDGLDDLHKQ++   F
Subjt:  VAVDAVSHVDGLDDLHKQVLMKAF

XP_022143375.1 nicastrin [Momordica charantia]7.5e-4985.48Show/hide
Query:  QASSKNVKNRKAYTSNVAEFDLVIQTTKAGTHSSVSCLKEETCLPLGGYSVWTLLPPINISSSDQSKPTILTVASMDSASFFLDKSIGADSPISDLISLL
        +ASSKNVKN+KAYTSNVAEFDLV+QTTKAGTH+SVSCLKEETCLPLGGYSVW+ LPPINI SSDQSKP ILTVASMDSASFF DKSIGADSPIS LI+LL
Subjt:  QASSKNVKNRKAYTSNVAEFDLVIQTTKAGTHSSVSCLKEETCLPLGGYSVWTLLPPINISSSDQSKPTILTVASMDSASFFLDKSIGADSPISDLISLL

Query:  VAVDAVSHVDGLDDLHKQVLMKAF
         AVDA+SHVDGLDDLHKQ++   F
Subjt:  VAVDAVSHVDGLDDLHKQVLMKAF

TrEMBL top hitse value%identityAlignment
A0A0A0L8Z5 Nicastrin6.0e-5280.6Show/hide
Query:  QASSKNVKNRKAYTSNVAEFDLVIQTTKAGTHSSVSCLKEETCLPLGGYSVWTLLPPINISSSDQSKPTILTVASMDSASFFLDKSIGADSPISDLISLL
        +A+SKNVK++K Y SNVAEFDLV+QTTKAGTHSS+SCLKEETCLPLGGYSVW+ LPPIN SSSDQSKP ILTVASMDSASFF DKSIGADSPIS LI+LL
Subjt:  QASSKNVKNRKAYTSNVAEFDLVIQTTKAGTHSSVSCLKEETCLPLGGYSVWTLLPPINISSSDQSKPTILTVASMDSASFFLDKSIGADSPISDLISLL

Query:  VAVDAVSHVDGLDDLHKQVLMKAFYSVSNCIFIL
         AVDA+SHVDGLDDLHKQVL++A + V NC F++
Subjt:  VAVDAVSHVDGLDDLHKQVLMKAFYSVSNCIFIL

A0A1S3C4C7 Nicastrin3.1e-4882.26Show/hide
Query:  QASSKNVKNRKAYTSNVAEFDLVIQTTKAGTHSSVSCLKEETCLPLGGYSVWTLLPPINISSSDQSKPTILTVASMDSASFFLDKSIGADSPISDLISLL
        +A+SKNVK++K Y SNVAEFDLV+QTTKAGTHSS+SCLKEETCLPLGGYSVW+ LPPIN SSSDQSKP ILTVASMDSASFF DKSIGADSPIS LI+LL
Subjt:  QASSKNVKNRKAYTSNVAEFDLVIQTTKAGTHSSVSCLKEETCLPLGGYSVWTLLPPINISSSDQSKPTILTVASMDSASFFLDKSIGADSPISDLISLL

Query:  VAVDAVSHVDGLDDLHKQVLMKAF
         AVDA+SHVDGLDDLHKQ++   F
Subjt:  VAVDAVSHVDGLDDLHKQVLMKAF

A0A1S3C4S1 Nicastrin3.1e-4882.26Show/hide
Query:  QASSKNVKNRKAYTSNVAEFDLVIQTTKAGTHSSVSCLKEETCLPLGGYSVWTLLPPINISSSDQSKPTILTVASMDSASFFLDKSIGADSPISDLISLL
        +A+SKNVK++K Y SNVAEFDLV+QTTKAGTHSS+SCLKEETCLPLGGYSVW+ LPPIN SSSDQSKP ILTVASMDSASFF DKSIGADSPIS LI+LL
Subjt:  QASSKNVKNRKAYTSNVAEFDLVIQTTKAGTHSSVSCLKEETCLPLGGYSVWTLLPPINISSSDQSKPTILTVASMDSASFFLDKSIGADSPISDLISLL

Query:  VAVDAVSHVDGLDDLHKQVLMKAF
         AVDA+SHVDGLDDLHKQ++   F
Subjt:  VAVDAVSHVDGLDDLHKQVLMKAF

A0A5D3CQA8 Nicastrin isoform X11.4e-4883.06Show/hide
Query:  QASSKNVKNRKAYTSNVAEFDLVIQTTKAGTHSSVSCLKEETCLPLGGYSVWTLLPPINISSSDQSKPTILTVASMDSASFFLDKSIGADSPISDLISLL
        QA+SKNVK++K Y SNVAEFDLV+QTTKAGTHSS+SCLKEETCLPLGGYSVW+ LPPIN SSSDQSKP ILTVASMDSASFF DKSIGADSPIS LI+LL
Subjt:  QASSKNVKNRKAYTSNVAEFDLVIQTTKAGTHSSVSCLKEETCLPLGGYSVWTLLPPINISSSDQSKPTILTVASMDSASFFLDKSIGADSPISDLISLL

Query:  VAVDAVSHVDGLDDLHKQVLMKAF
         AVDA+SHVDGLDDLHKQ++   F
Subjt:  VAVDAVSHVDGLDDLHKQVLMKAF

A0A6J1CNM4 Nicastrin3.6e-4985.48Show/hide
Query:  QASSKNVKNRKAYTSNVAEFDLVIQTTKAGTHSSVSCLKEETCLPLGGYSVWTLLPPINISSSDQSKPTILTVASMDSASFFLDKSIGADSPISDLISLL
        +ASSKNVKN+KAYTSNVAEFDLV+QTTKAGTH+SVSCLKEETCLPLGGYSVW+ LPPINI SSDQSKP ILTVASMDSASFF DKSIGADSPIS LI+LL
Subjt:  QASSKNVKNRKAYTSNVAEFDLVIQTTKAGTHSSVSCLKEETCLPLGGYSVWTLLPPINISSSDQSKPTILTVASMDSASFFLDKSIGADSPISDLISLL

Query:  VAVDAVSHVDGLDDLHKQVLMKAF
         AVDA+SHVDGLDDLHKQ++   F
Subjt:  VAVDAVSHVDGLDDLHKQVLMKAF

SwissProt top hitse value%identityAlignment
P57716 Nicastrin5.3e-0531.18Show/hide
Query:  SSVSCLKEETCLPLGGYSVWTLLPPINISSSDQSKPTILTVAS-MDSASFFLDKSIGADSPISDLISLLVAVDAVSHVDGLDDLHKQVLMKAF
        S+ S   E  C PL  Y+VW++L PIN S   +    ++  A+ +DS SFF + + GA+S ++  ++ L A +A+     +  L + V+   F
Subjt:  SSVSCLKEETCLPLGGYSVWTLLPPINISSSDQSKPTILTVAS-MDSASFFLDKSIGADSPISDLISLLVAVDAVSHVDGLDDLHKQVLMKAF

Q54JT7 Nicastrin6.9e-0532.65Show/hide
Query:  YTSNVAEFDLVIQTTKAGTHSSVSCLKEETCLPLGGYSVWTLLPPINISSSDQSKPTILTVASMDSASFFLDKSIGADSPISDLISLLVAVDAVSHVD
        Y +  AE D  +Q    G  ++ +CL+   C P+GG S+W+    +     DQSKP IL +  +D+ +FF D + G D     L  LL  ++ +  VD
Subjt:  YTSNVAEFDLVIQTTKAGTHSSVSCLKEETCLPLGGYSVWTLLPPINISSSDQSKPTILTVASMDSASFFLDKSIGADSPISDLISLLVAVDAVSHVD

Q8CGU6 Nicastrin4.1e-0531.18Show/hide
Query:  SSVSCLKEETCLPLGGYSVWTLLPPINISSSDQSKPTILTVAS-MDSASFFLDKSIGADSPISDLISLLVAVDAVSHVDGLDDLHKQVLMKAF
        S+ S   E  C PL  Y+VW++L PIN S   +    ++  A+ +DS SFF + + GA+S ++  ++ L A +A+     +  L + V+   F
Subjt:  SSVSCLKEETCLPLGGYSVWTLLPPINISSSDQSKPTILTVAS-MDSASFFLDKSIGADSPISDLISLLVAVDAVSHVDGLDDLHKQVLMKAF

Q8GUM5 Nicastrin2.0e-3664.96Show/hide
Query:  SKNVKNRKAYTSNVAEFDLVIQTTKAGTHSSVSCLKEETCLPLGGYSVWTLLPPINISSSDQSKPTILTVASMDSASFFLDKSIGADSPISDLISLLVAV
        SK       YTS+VAEF++V++TTKAGTH+S +CL+E TCLPLGGYSVW+ LPPI++SSS+  KP +LTVASMD+ASFF DKS GADSPIS L++LL AV
Subjt:  SKNVKNRKAYTSNVAEFDLVIQTTKAGTHSSVSCLKEETCLPLGGYSVWTLLPPINISSSDQSKPTILTVASMDSASFFLDKSIGADSPISDLISLLVAV

Query:  DAVSHVDGLDDLHKQVL
        DA+S VDG+ +L KQ++
Subjt:  DAVSHVDGLDDLHKQVL

Q92542 Nicastrin3.1e-0528.57Show/hide
Query:  KAGTHSSVSCLKEETCLPLGGYSVWTLLPPINISSSDQSKPTILTVAS-MDSASFFLDKSIGADSPISDLISLLVAVDAVSHVDGLDDLHKQVLMKAF
        ++   S+ S   E  C PL  Y+VW++L PIN + + +    ++  A+ +DS SFF + + GA+S ++  ++ L A +A+     +  L + V+   F
Subjt:  KAGTHSSVSCLKEETCLPLGGYSVWTLLPPINISSSDQSKPTILTVAS-MDSASFFLDKSIGADSPISDLISLLVAVDAVSHVDGLDDLHKQVLMKAF

Arabidopsis top hitse value%identityAlignment
AT3G52640.1 Zn-dependent exopeptidases superfamily protein1.4e-3764.96Show/hide
Query:  SKNVKNRKAYTSNVAEFDLVIQTTKAGTHSSVSCLKEETCLPLGGYSVWTLLPPINISSSDQSKPTILTVASMDSASFFLDKSIGADSPISDLISLLVAV
        SK       YTS+VAEF++V++TTKAGTH+S +CL+E TCLPLGGYSVW+ LPPI++SSS+  KP +LTVASMD+ASFF DKS GADSPIS L++LL AV
Subjt:  SKNVKNRKAYTSNVAEFDLVIQTTKAGTHSSVSCLKEETCLPLGGYSVWTLLPPINISSSDQSKPTILTVASMDSASFFLDKSIGADSPISDLISLLVAV

Query:  DAVSHVDGLDDLHKQVL
        DA+S VDG+ +L KQ++
Subjt:  DAVSHVDGLDDLHKQVL

AT3G52640.2 Zn-dependent exopeptidases superfamily protein1.4e-3764.96Show/hide
Query:  SKNVKNRKAYTSNVAEFDLVIQTTKAGTHSSVSCLKEETCLPLGGYSVWTLLPPINISSSDQSKPTILTVASMDSASFFLDKSIGADSPISDLISLLVAV
        SK       YTS+VAEF++V++TTKAGTH+S +CL+E TCLPLGGYSVW+ LPPI++SSS+  KP +LTVASMD+ASFF DKS GADSPIS L++LL AV
Subjt:  SKNVKNRKAYTSNVAEFDLVIQTTKAGTHSSVSCLKEETCLPLGGYSVWTLLPPINISSSDQSKPTILTVASMDSASFFLDKSIGADSPISDLISLLVAV

Query:  DAVSHVDGLDDLHKQVL
        DA+S VDG+ +L KQ++
Subjt:  DAVSHVDGLDDLHKQVL

AT3G52640.3 Zn-dependent exopeptidases superfamily protein1.4e-3764.96Show/hide
Query:  SKNVKNRKAYTSNVAEFDLVIQTTKAGTHSSVSCLKEETCLPLGGYSVWTLLPPINISSSDQSKPTILTVASMDSASFFLDKSIGADSPISDLISLLVAV
        SK       YTS+VAEF++V++TTKAGTH+S +CL+E TCLPLGGYSVW+ LPPI++SSS+  KP +LTVASMD+ASFF DKS GADSPIS L++LL AV
Subjt:  SKNVKNRKAYTSNVAEFDLVIQTTKAGTHSSVSCLKEETCLPLGGYSVWTLLPPINISSSDQSKPTILTVASMDSASFFLDKSIGADSPISDLISLLVAV

Query:  DAVSHVDGLDDLHKQVL
        DA+S VDG+ +L KQ++
Subjt:  DAVSHVDGLDDLHKQVL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CAGGCTTCTTCAAAAAATGTGAAGAATAGGAAAGCTTACACATCTAATGTTGCTGAATTTGATCTGGTGATTCAGACAACTAAGGCTGGGACTCATAGTTCAGTGTCTTG
TTTGAAAGAAGAAACATGCCTTCCATTAGGTGGATACAGTGTCTGGACGTTGCTTCCTCCAATCAATATTTCTTCCTCAGATCAGTCTAAGCCCACCATTCTAACGGTAG
CATCAATGGATTCTGCTTCTTTCTTCCTTGATAAAAGCATTGGTGCAGACTCCCCCATTTCTGATCTGATTTCATTGCTGGTTGCAGTTGATGCAGTTTCCCATGTGGAT
GGACTGGATGATCTTCATAAACAGGTTCTTATGAAGGCTTTCTACTCTGTATCCAATTGTATCTTTATACTTAAGTGCATG
mRNA sequenceShow/hide mRNA sequence
CAGGCTTCTTCAAAAAATGTGAAGAATAGGAAAGCTTACACATCTAATGTTGCTGAATTTGATCTGGTGATTCAGACAACTAAGGCTGGGACTCATAGTTCAGTGTCTTG
TTTGAAAGAAGAAACATGCCTTCCATTAGGTGGATACAGTGTCTGGACGTTGCTTCCTCCAATCAATATTTCTTCCTCAGATCAGTCTAAGCCCACCATTCTAACGGTAG
CATCAATGGATTCTGCTTCTTTCTTCCTTGATAAAAGCATTGGTGCAGACTCCCCCATTTCTGATCTGATTTCATTGCTGGTTGCAGTTGATGCAGTTTCCCATGTGGAT
GGACTGGATGATCTTCATAAACAGGTTCTTATGAAGGCTTTCTACTCTGTATCCAATTGTATCTTTATACTTAAGTGCATG
Protein sequenceShow/hide protein sequence
QASSKNVKNRKAYTSNVAEFDLVIQTTKAGTHSSVSCLKEETCLPLGGYSVWTLLPPINISSSDQSKPTILTVASMDSASFFLDKSIGADSPISDLISLLVAVDAVSHVD
GLDDLHKQVLMKAFYSVSNCIFILKCM