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MS019112 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019112
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold20:1570683..1572562
RNA-Seq ExpressionMS019112
SyntenyMS019112
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606995.1 hypothetical protein SDJN03_00337, partial [Cucurbita argyrosperma subsp. sororia]1.2e-5781.88Show/hide
Query:  MALTLHCFCSSARFLPLSPKAPSEVLRSDRLNRASKLSADSTKFHTIRSSANSNNQLTLRTCRNCKTQFDPSLNHPRACRFHTAHFGGETKRKFESVHTG
        MAL LHC C SARF+ +  +      RS  LNR SKLSA+S KF  IRSSANSN+QLTLRTCRNCK QFDPSLNHPRACRFHTAHFGGETKRKFESVHTG
Subjt:  MALTLHCFCSSARFLPLSPKAPSEVLRSDRLNRASKLSADSTKFHTIRSSANSNNQLTLRTCRNCKTQFDPSLNHPRACRFHTAHFGGETKRKFESVHTG

Query:  GTMDTPDSGKVFQYWHCCGSEDPFDPGCTAAPHSSYDD
        GTMDTPDSGKV QYWHCCGSEDPFDPGCTAAPHSSYDD
Subjt:  GTMDTPDSGKVFQYWHCCGSEDPFDPGCTAAPHSSYDD

XP_022143294.1 uncharacterized protein LOC111013199 [Momordica charantia]1.2e-7396.4Show/hide
Query:  MALTLHCFCSSARFLPLSPKAPSEVLRSDRLNRASKLSADSTKFHTIRSSANSNNQLTLRTCRNCKTQFDPSLNHPRACRFHTAHFGGETKRKFESVHTG
        MAL LHC+CSS RFLPL+PKAPSEVLRSDRLNRASKLSADSTKFHTIR+SANSNNQLTLRTCRNCKTQFDPSLNHPRACRFHTAHFGGETKRKFESVHTG
Subjt:  MALTLHCFCSSARFLPLSPKAPSEVLRSDRLNRASKLSADSTKFHTIRSSANSNNQLTLRTCRNCKTQFDPSLNHPRACRFHTAHFGGETKRKFESVHTG

Query:  GTMDTPDSGKVFQYWHCCGSEDPFDPGCTAAPHSSYDDS
        GTMDTPDSGKVFQYWHCCGSEDPFDPGCTAAPHSSYDDS
Subjt:  GTMDTPDSGKVFQYWHCCGSEDPFDPGCTAAPHSSYDDS

XP_022948602.1 uncharacterized protein LOC111452227 [Cucurbita moschata]2.0e-5781.88Show/hide
Query:  MALTLHCFCSSARFLPLSPKAPSEVLRSDRLNRASKLSADSTKFHTIRSSANSNNQLTLRTCRNCKTQFDPSLNHPRACRFHTAHFGGETKRKFESVHTG
        MAL LHC C SARF+    +      RS  LNR SKLSA+S KF  IRSSANSN+QLTLRTCRNCK QFDPSLNHPRACRFHTAHFGGETKRKFESVHTG
Subjt:  MALTLHCFCSSARFLPLSPKAPSEVLRSDRLNRASKLSADSTKFHTIRSSANSNNQLTLRTCRNCKTQFDPSLNHPRACRFHTAHFGGETKRKFESVHTG

Query:  GTMDTPDSGKVFQYWHCCGSEDPFDPGCTAAPHSSYDD
        GTMDTPDSGKV QYWHCCGSEDPFDPGCTAAPHSSYDD
Subjt:  GTMDTPDSGKVFQYWHCCGSEDPFDPGCTAAPHSSYDD

XP_023522633.1 uncharacterized protein LOC111786627 [Cucurbita pepo subsp. pepo]9.0e-5881.88Show/hide
Query:  MALTLHCFCSSARFLPLSPKAPSEVLRSDRLNRASKLSADSTKFHTIRSSANSNNQLTLRTCRNCKTQFDPSLNHPRACRFHTAHFGGETKRKFESVHTG
        MAL LHC C SARF+    +      RS  LNR SKLSA+S K +TIRSSANS+NQLTLRTCRNCK QFDPSLNHPRACRFHTAHFGGETKRKFESVHTG
Subjt:  MALTLHCFCSSARFLPLSPKAPSEVLRSDRLNRASKLSADSTKFHTIRSSANSNNQLTLRTCRNCKTQFDPSLNHPRACRFHTAHFGGETKRKFESVHTG

Query:  GTMDTPDSGKVFQYWHCCGSEDPFDPGCTAAPHSSYDD
        GTMDTPDSGKV QYWHCCGSEDPFDPGCTAAPHSSYDD
Subjt:  GTMDTPDSGKVFQYWHCCGSEDPFDPGCTAAPHSSYDD

XP_038879129.1 uncharacterized protein LOC120071126 [Benincasa hispida]1.0e-6185.51Show/hide
Query:  MALTLHCFCSSARFLPLSPKAPSEVLRSDRLNRASKLSADSTKFHTIRSSANSNNQLTLRTCRNCKTQFDPSLNHPRACRFHTAHFGGETKRKFESVHTG
        MAL LHC+ SSARFL L PK   +V+RSDRLNR SKLS++S KF  IRSSA+SNNQLTLRTCRNCK QFDPSLNHPRACRFHTAHFGGETKRKFESVH+G
Subjt:  MALTLHCFCSSARFLPLSPKAPSEVLRSDRLNRASKLSADSTKFHTIRSSANSNNQLTLRTCRNCKTQFDPSLNHPRACRFHTAHFGGETKRKFESVHTG

Query:  GTMDTPDSGKVFQYWHCCGSEDPFDPGCTAAPHSSYDD
        GTMDTPDSGKVFQYWHCCGSEDPFDPGCTA+PHSSYDD
Subjt:  GTMDTPDSGKVFQYWHCCGSEDPFDPGCTAAPHSSYDD

TrEMBL top hitse value%identityAlignment
A0A0A0L8V5 Uncharacterized protein1.3e-5781.88Show/hide
Query:  MALTLHCFCSSARFLPLSPKAPSEVLRSDRLNRASKLSADSTKFHTIRSSANSNNQLTLRTCRNCKTQFDPSLNHPRACRFHTAHFGGETKRKFESVHTG
        MA  LHC+ SSA F+ L  K    VLRSD LNR SKLS++S K  TIR SANSNNQLTLRTCRNCK QFDPSLNHPRACRFHT+HFGGETKRKFESVH+G
Subjt:  MALTLHCFCSSARFLPLSPKAPSEVLRSDRLNRASKLSADSTKFHTIRSSANSNNQLTLRTCRNCKTQFDPSLNHPRACRFHTAHFGGETKRKFESVHTG

Query:  GTMDTPDSGKVFQYWHCCGSEDPFDPGCTAAPHSSYDD
        GTMDTPDSGKVFQYWHCCGSEDPFDPGCTA+PHSSYDD
Subjt:  GTMDTPDSGKVFQYWHCCGSEDPFDPGCTAAPHSSYDD

A0A1S3C5F2 uncharacterized protein LOC1034968573.6e-5276.81Show/hide
Query:  MALTLHCFCSSARFLPLSPKAPSEVLRSDRLNRASKLSADSTKFHTIRSSANSNNQLTLRTCRNCKTQFDPSLNHPRACRFHTAHFGGETKRKFESVHTG
        MA  LHC+ SS  F+ L   +   VLRS      SK  ++S KF +IR SANSNNQLTLRTCRNCK+QFDPSLNHPRACRFHTAHFGGETKRKFESVH G
Subjt:  MALTLHCFCSSARFLPLSPKAPSEVLRSDRLNRASKLSADSTKFHTIRSSANSNNQLTLRTCRNCKTQFDPSLNHPRACRFHTAHFGGETKRKFESVHTG

Query:  GTMDTPDSGKVFQYWHCCGSEDPFDPGCTAAPHSSYDD
        GTMDTPDSGKVFQYWHCCGSEDPFDPGCTA+PHSSYDD
Subjt:  GTMDTPDSGKVFQYWHCCGSEDPFDPGCTAAPHSSYDD

A0A6J1CNX1 uncharacterized protein LOC1110131995.7e-7496.4Show/hide
Query:  MALTLHCFCSSARFLPLSPKAPSEVLRSDRLNRASKLSADSTKFHTIRSSANSNNQLTLRTCRNCKTQFDPSLNHPRACRFHTAHFGGETKRKFESVHTG
        MAL LHC+CSS RFLPL+PKAPSEVLRSDRLNRASKLSADSTKFHTIR+SANSNNQLTLRTCRNCKTQFDPSLNHPRACRFHTAHFGGETKRKFESVHTG
Subjt:  MALTLHCFCSSARFLPLSPKAPSEVLRSDRLNRASKLSADSTKFHTIRSSANSNNQLTLRTCRNCKTQFDPSLNHPRACRFHTAHFGGETKRKFESVHTG

Query:  GTMDTPDSGKVFQYWHCCGSEDPFDPGCTAAPHSSYDDS
        GTMDTPDSGKVFQYWHCCGSEDPFDPGCTAAPHSSYDDS
Subjt:  GTMDTPDSGKVFQYWHCCGSEDPFDPGCTAAPHSSYDDS

A0A6J1G9P5 uncharacterized protein LOC1114522279.7e-5881.88Show/hide
Query:  MALTLHCFCSSARFLPLSPKAPSEVLRSDRLNRASKLSADSTKFHTIRSSANSNNQLTLRTCRNCKTQFDPSLNHPRACRFHTAHFGGETKRKFESVHTG
        MAL LHC C SARF+    +      RS  LNR SKLSA+S KF  IRSSANSN+QLTLRTCRNCK QFDPSLNHPRACRFHTAHFGGETKRKFESVHTG
Subjt:  MALTLHCFCSSARFLPLSPKAPSEVLRSDRLNRASKLSADSTKFHTIRSSANSNNQLTLRTCRNCKTQFDPSLNHPRACRFHTAHFGGETKRKFESVHTG

Query:  GTMDTPDSGKVFQYWHCCGSEDPFDPGCTAAPHSSYDD
        GTMDTPDSGKV QYWHCCGSEDPFDPGCTAAPHSSYDD
Subjt:  GTMDTPDSGKVFQYWHCCGSEDPFDPGCTAAPHSSYDD

A0A6J1K626 uncharacterized protein LOC1114926452.2e-5781.16Show/hide
Query:  MALTLHCFCSSARFLPLSPKAPSEVLRSDRLNRASKLSADSTKFHTIRSSANSNNQLTLRTCRNCKTQFDPSLNHPRACRFHTAHFGGETKRKFESVHTG
        MAL LHC C SARF+    +      RS  LNR SKLSA+S K + IRSSANS+NQLTLRTCRNCK QFDPSLNHPRACRFHTAHFGGETKRKFESVHTG
Subjt:  MALTLHCFCSSARFLPLSPKAPSEVLRSDRLNRASKLSADSTKFHTIRSSANSNNQLTLRTCRNCKTQFDPSLNHPRACRFHTAHFGGETKRKFESVHTG

Query:  GTMDTPDSGKVFQYWHCCGSEDPFDPGCTAAPHSSYDD
        GTMDTPDSGKV QYWHCCGSEDPFDPGCTAAPHSSYDD
Subjt:  GTMDTPDSGKVFQYWHCCGSEDPFDPGCTAAPHSSYDD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G65000.1 unknown protein5.3e-0833.73Show/hide
Query:  RTCRNCKTQFDPSLNHPRACRFHTAHF----GGETKRKFESVHTGGTMDTPDSGKVFQYWHCCGSEDPFDPGCTAAPHSSYDD
        + C+ CK  +    N   +CRFH + F      + KR +E       +   D     +++ CCG+EDP  PGC   PH SYDD
Subjt:  RTCRNCKTQFDPSLNHPRACRFHTAHF----GGETKRKFESVHTGGTMDTPDSGKVFQYWHCCGSEDPFDPGCTAAPHSSYDD

AT5G38060.1 unknown protein6.7e-4365.81Show/hide
Query:  PSEVLRSDRLNRASKLSADSTKFHTIRSSANSNNQLTLRTCRNCKTQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGTMDTPDSGKVFQYWHCCGSE
        P  ++ S  L        +S +F +  ++++S+   TLRTC+NCKTQFDP LN+PRACRFHTAHFGGETKRKFESV+TGGTMDTP+SGKV QYWHCCGSE
Subjt:  PSEVLRSDRLNRASKLSADSTKFHTIRSSANSNNQLTLRTCRNCKTQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGTMDTPDSGKVFQYWHCCGSE

Query:  DPFDPGCTAAPHSSYDD
        DPFD GCTA+PH++YDD
Subjt:  DPFDPGCTAAPHSSYDD

AT5G38060.2 unknown protein1.6e-3356.41Show/hide
Query:  PSEVLRSDRLNRASKLSADSTKFHTIRSSANSNNQLTLRTCRNCKTQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGTMDTPDSGKVFQYWHCCGSE
        P  ++ S  L        +S +F +  ++++S+   TLRTC+NCKTQFDP LN+PRACRFHTAHFG            GGTMDTP+SGKV QYWHCCGSE
Subjt:  PSEVLRSDRLNRASKLSADSTKFHTIRSSANSNNQLTLRTCRNCKTQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGTMDTPDSGKVFQYWHCCGSE

Query:  DPFDPGCTAAPHSSYDD
        DPFD GCTA+PH++YDD
Subjt:  DPFDPGCTAAPHSSYDD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCTCACTCTCCATTGTTTCTGTTCTTCGGCTCGCTTCCTTCCTCTCAGTCCCAAAGCTCCGTCGGAAGTTCTTCGCTCCGATCGTCTGAATCGCGCTTCGAAATT
GAGCGCAGATTCGACTAAATTCCACACAATACGAAGCTCCGCGAACTCGAACAACCAATTGACGCTTAGAACTTGCAGAAATTGCAAGACGCAATTTGACCCCTCCCTCA
ATCACCCTCGAGCTTGCCGATTTCACACCGCTCATTTTGGAGGTGAAACAAAGAGAAAGTTTGAAAGTGTACACACAGGAGGAACAATGGACACTCCAGACTCTGGCAAG
GTTTTTCAATACTGGCATTGTTGTGGGTCTGAGGATCCTTTCGATCCGGGATGTACTGCTGCTCCACACTCCTCCTACGATGACAGT
mRNA sequenceShow/hide mRNA sequence
ATGGCTCTCACTCTCCATTGTTTCTGTTCTTCGGCTCGCTTCCTTCCTCTCAGTCCCAAAGCTCCGTCGGAAGTTCTTCGCTCCGATCGTCTGAATCGCGCTTCGAAATT
GAGCGCAGATTCGACTAAATTCCACACAATACGAAGCTCCGCGAACTCGAACAACCAATTGACGCTTAGAACTTGCAGAAATTGCAAGACGCAATTTGACCCCTCCCTCA
ATCACCCTCGAGCTTGCCGATTTCACACCGCTCATTTTGGAGGTGAAACAAAGAGAAAGTTTGAAAGTGTACACACAGGAGGAACAATGGACACTCCAGACTCTGGCAAG
GTTTTTCAATACTGGCATTGTTGTGGGTCTGAGGATCCTTTCGATCCGGGATGTACTGCTGCTCCACACTCCTCCTACGATGACAGT
Protein sequenceShow/hide protein sequence
MALTLHCFCSSARFLPLSPKAPSEVLRSDRLNRASKLSADSTKFHTIRSSANSNNQLTLRTCRNCKTQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGTMDTPDSGK
VFQYWHCCGSEDPFDPGCTAAPHSSYDDS