; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS019126 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019126
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPlastid movement impaired 2
Genome locationscaffold20:1736849..1737442
RNA-Seq ExpressionMS019126
SyntenyMS019126
Gene Ontology termsNA
InterPro domainsIPR025322 - Protein of unknown function DUF4228, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607003.1 hypothetical protein SDJN03_00345, partial [Cucurbita argyrosperma subsp. sororia]1.7e-4152.45Show/hide
Query:  MGNAMGGGRRRKGRT-KVMKIDGETMKLATPITASEVLNQHPDHRLFESQSLRNLGLRATPLEPHHQLHPKALYFLLQLPPLPAHAPPLRRVQSGLHASA
        MGNAMGGG RR  RT KVMKI+GET K+ TP TA +V   HP+H L++SQS+  LGLRA PL+PHHQL PK LYFLL LPPLP    PL RV+S L +SA
Subjt:  MGNAMGGGRRRKGRT-KVMKIDGETMKLATPITASEVLNQHPDHRLFESQSLRNLGLRATPLEPHHQLHPKALYFLLQLPPLPAHAPPLRRVQSGLHASA

Query:  TDRLEWLMLSRRSISDLHVAR--PPEPSAA-----SLQVKFRLSTAEMDRLLNECEDKAEVAQRILNLYGRDTDRFRGGQGQLRSTAQASTGKAREVRFL
        +DRLE LMLSRRS+SDL   R  P   S A      +Q+K R+   E +RL+ E + K E A+RI++L+                T    +G+AREVR L
Subjt:  TDRLEWLMLSRRSISDLHVAR--PPEPSAA-----SLQVKFRLSTAEMDRLLNECEDKAEVAQRILNLYGRDTDRFRGGQGQLRSTAQASTGKAREVRFL

Query:  ATLF
        A LF
Subjt:  ATLF

XP_022143428.1 uncharacterized protein At1g66480-like [Momordica charantia]8.2e-9797.37Show/hide
Query:  MGNAMGGGRRRKGRTKVMKIDGETMKLATPITASEVLNQHPDHRLFESQSLRNLGLRATPLEPHHQLHPKALYFLLQLPPLPAHAPPLRRVQSGLHASAT
        MGNAMGGGRRRKGRTKVMKIDGETMKLATPITASEVL+QHPDHRLFESQSLRNLGLRATPLEPHHQLHPKALYFLLQLPPLPAHAPPLRRVQSGLHASAT
Subjt:  MGNAMGGGRRRKGRTKVMKIDGETMKLATPITASEVLNQHPDHRLFESQSLRNLGLRATPLEPHHQLHPKALYFLLQLPPLPAHAPPLRRVQSGLHASAT

Query:  DRLEWLMLSRRSISDLHVARPPEPSAASLQVKFRLSTAEMDRLLNECEDKAEVAQRILNLYGRDTDRFRGGQGQLRSTAQASTGKAREVR
        DRLEWLMLSRRSISDLHVARPPEPSAA LQVKFRL TAEMDRLLNECEDKAEVAQRILNLYGRDTDRFRGGQGQLRSTAQAST KARE R
Subjt:  DRLEWLMLSRRSISDLHVARPPEPSAASLQVKFRLSTAEMDRLLNECEDKAEVAQRILNLYGRDTDRFRGGQGQLRSTAQASTGKAREVR

XP_022948507.1 uncharacterized protein At1g66480-like [Cucurbita moschata]6.0e-3956.8Show/hide
Query:  MGNAMGGGRRRKGRT-KVMKIDGETMKLATPITASEVLNQHPDHRLFESQSLRNLGLRATPLEPHHQLHPKALYFLLQLPPLPAHAPPLRRVQSGLHASA
        MGNAMGGG RR  RT KVMKI+GET K+ TP TA +V   HP+H L++SQS+  LGLRA PL+PHHQL PK LYFLL LPPLP    PL RV+S L +SA
Subjt:  MGNAMGGGRRRKGRT-KVMKIDGETMKLATPITASEVLNQHPDHRLFESQSLRNLGLRATPLEPHHQLHPKALYFLLQLPPLPAHAPPLRRVQSGLHASA

Query:  TDRLEWLMLSRRSISDLHVAR--PPEPSAA-----SLQVKFRLSTAEMDRLLNECEDKAEVAQRILNLY
        +DRLE LMLSRRS+SDL   R  P   S A      +Q+K R+   E +RL+ E + K E A+RI++L+
Subjt:  TDRLEWLMLSRRSISDLHVAR--PPEPSAA-----SLQVKFRLSTAEMDRLLNECEDKAEVAQRILNLY

XP_023524596.1 uncharacterized protein At1g66480-like [Cucurbita pepo subsp. pepo]1.7e-4152.71Show/hide
Query:  MGNAMGGGRRRKGRT-KVMKIDGETMKLATPITASEVLNQHPDHRLFESQSLRNLGLRATPLEPHHQLHPKALYFLLQLPPLPAHAPPLRRVQSGLHASA
        MGNAMG G RR  RT KVMKI+GET K+ TP TAS+V   HP+H L++SQS+  LGLRA PL+PHHQL PK LYFLL LPPLP    PL RV+S L +SA
Subjt:  MGNAMGGGRRRKGRT-KVMKIDGETMKLATPITASEVLNQHPDHRLFESQSLRNLGLRATPLEPHHQLHPKALYFLLQLPPLPAHAPPLRRVQSGLHASA

Query:  TDRLEWLMLSRRSISDLHVAR--PPEPSAAS-----LQVKFRLSTAEMDRLLNECEDKAEVAQRILNLYGRDTDRFRGGQGQLRSTAQASTGKAREVRFL
        +DRLE LMLSRRS+SDL   R  P   S AS     +Q+K R+   E +RL+ E + K E  +RI++L+                T    +G+AREVRFL
Subjt:  TDRLEWLMLSRRSISDLHVAR--PPEPSAAS-----LQVKFRLSTAEMDRLLNECEDKAEVAQRILNLYGRDTDRFRGGQGQLRSTAQASTGKAREVRFL

Query:  ATL
        A L
Subjt:  ATL

XP_038887072.1 uncharacterized protein At1g66480-like [Benincasa hispida]3.6e-4454.33Show/hide
Query:  MGNAM---GGGRRRKGRTKVMKIDGETMKLATPITASEVLNQHPDHRLFESQSLRNLGLRATPLEPHHQLHPKALYFLLQLPPLPAHAPPLRRVQSGLHA
        MGN+M   G  RRRK  TKVMKI+GE  K+  P TA EV   HP+H L+ESQSL   GLRA PL+PHHQL PK LYFLLQLP L     PLRRV S LH 
Subjt:  MGNAM---GGGRRRKGRTKVMKIDGETMKLATPITASEVLNQHPDHRLFESQSLRNLGLRATPLEPHHQLHPKALYFLLQLPPLPAHAPPLRRVQSGLHA

Query:  SATDRLEWLMLSRRSISDLHVAR-PPE------PSAASLQVKFRLSTAEMDRLLNECEDKAEVAQRILNLYGRDTDRFRGGQGQ--LRSTAQASTGKARE
        SA+DRLE L+LSRRS+SDL   R  P+       +A  +QVKFRL   E +RL+ EC++K E  +RI++  GR  D   GGQ          A +GKARE
Subjt:  SATDRLEWLMLSRRSISDLHVAR-PPE------PSAASLQVKFRLSTAEMDRLLNECEDKAEVAQRILNLYGRDTDRFRGGQGQ--LRSTAQASTGKARE

Query:  VRFLATLF
        V FLA LF
Subjt:  VRFLATLF

TrEMBL top hitse value%identityAlignment
A0A0A0L7W0 Uncharacterized protein6.0e-3753.04Show/hide
Query:  MGNAMGGGRRRKGR-TKVMKIDGETMKLATPITASEVLNQHPDHRLFESQSLRNLGLRATPLEPHHQLHPKALYFLLQLPPLPAHAPPLRRVQSGLH-AS
        MGNA+G G RRK R TKVMKI+GET+K+  P TA EV + +P H L+ES+SL+  GLRA PL+PH  L PK LYFLLQLP LP     LRR  S LH  S
Subjt:  MGNAMGGGRRRKGR-TKVMKIDGETMKLATPITASEVLNQHPDHRLFESQSLRNLGLRATPLEPHHQLHPKALYFLLQLPPLPAHAPPLRRVQSGLH-AS

Query:  ATDRLEWLMLSRRSISDLHVAR-------PPEPSAASLQVKFRLSTAEMDRLLNECEDKAEVAQRILNLYGRDTDRFRGGQ
        A+DRLE L+LSRRS+SDL   R         + +A  +QVKF+L  AE +RL+ EC++K EV +RI++   R  D   G Q
Subjt:  ATDRLEWLMLSRRSISDLHVAR-------PPEPSAASLQVKFRLSTAEMDRLLNECEDKAEVAQRILNLYGRDTDRFRGGQ

A0A5B7ATV3 Uncharacterized protein2.4e-3848.91Show/hide
Query:  MGNAMGGGRRRKGRTKVMKIDGETMKLATPITASEVLNQHPDHRLFESQSLRNLGLRATPLEPHHQLHPKALYFLLQLPPLPAHAPPLRRVQSGLHASAT
        MGN++GGGRR   + KVMKI+GET KL TPI   +V++ +P H L ES++++  G+RA PLEP  +L PK +YFLL+LP LP    P RRV+SG+H SA 
Subjt:  MGNAMGGGRRRKGRTKVMKIDGETMKLATPITASEVLNQHPDHRLFESQSLRNLGLRATPLEPHHQLHPKALYFLLQLPPLPAHAPPLRRVQSGLHASAT

Query:  DRLEWLMLSRRSISDLHVARPPEPSA--ASLQVKFRLSTAEMDRLLNECEDKAEVAQRILNLYGRDTDRFRGGQGQLRSTAQAS
        DRLE LMLSRRS+SDL + RP   S     +QVK RL  A++ +L+ E  D+AEVA++I+ LY  +       + +  + A+AS
Subjt:  DRLEWLMLSRRSISDLHVARPPEPSA--ASLQVKFRLSTAEMDRLLNECEDKAEVAQRILNLYGRDTDRFRGGQGQLRSTAQAS

A0A6J1CQP3 uncharacterized protein At1g66480-like4.0e-9797.37Show/hide
Query:  MGNAMGGGRRRKGRTKVMKIDGETMKLATPITASEVLNQHPDHRLFESQSLRNLGLRATPLEPHHQLHPKALYFLLQLPPLPAHAPPLRRVQSGLHASAT
        MGNAMGGGRRRKGRTKVMKIDGETMKLATPITASEVL+QHPDHRLFESQSLRNLGLRATPLEPHHQLHPKALYFLLQLPPLPAHAPPLRRVQSGLHASAT
Subjt:  MGNAMGGGRRRKGRTKVMKIDGETMKLATPITASEVLNQHPDHRLFESQSLRNLGLRATPLEPHHQLHPKALYFLLQLPPLPAHAPPLRRVQSGLHASAT

Query:  DRLEWLMLSRRSISDLHVARPPEPSAASLQVKFRLSTAEMDRLLNECEDKAEVAQRILNLYGRDTDRFRGGQGQLRSTAQASTGKAREVR
        DRLEWLMLSRRSISDLHVARPPEPSAA LQVKFRL TAEMDRLLNECEDKAEVAQRILNLYGRDTDRFRGGQGQLRSTAQAST KARE R
Subjt:  DRLEWLMLSRRSISDLHVARPPEPSAASLQVKFRLSTAEMDRLLNECEDKAEVAQRILNLYGRDTDRFRGGQGQLRSTAQASTGKAREVR

A0A6J1G9F9 uncharacterized protein At1g66480-like2.9e-3956.8Show/hide
Query:  MGNAMGGGRRRKGRT-KVMKIDGETMKLATPITASEVLNQHPDHRLFESQSLRNLGLRATPLEPHHQLHPKALYFLLQLPPLPAHAPPLRRVQSGLHASA
        MGNAMGGG RR  RT KVMKI+GET K+ TP TA +V   HP+H L++SQS+  LGLRA PL+PHHQL PK LYFLL LPPLP    PL RV+S L +SA
Subjt:  MGNAMGGGRRRKGRT-KVMKIDGETMKLATPITASEVLNQHPDHRLFESQSLRNLGLRATPLEPHHQLHPKALYFLLQLPPLPAHAPPLRRVQSGLHASA

Query:  TDRLEWLMLSRRSISDLHVAR--PPEPSAA-----SLQVKFRLSTAEMDRLLNECEDKAEVAQRILNLY
        +DRLE LMLSRRS+SDL   R  P   S A      +Q+K R+   E +RL+ E + K E A+RI++L+
Subjt:  TDRLEWLMLSRRSISDLHVAR--PPEPSAA-----SLQVKFRLSTAEMDRLLNECEDKAEVAQRILNLY

A0A6J1K9N3 uncharacterized protein At1g66480-like6.4e-3956.8Show/hide
Query:  MGNAMGGGRRRKGRT-KVMKIDGETMKLATPITASEVLNQHPDHRLFESQSLRNLGLRATPLEPHHQLHPKALYFLLQLPPLPAHAPPLRRVQSGLHASA
        MGNAMG G RR  RT KVMKI+GET K+ TP TA +V   HP+H L++SQS+  LGLRA PL+PHHQL PK LYFLL LPPLP    PL RV+S L +SA
Subjt:  MGNAMGGGRRRKGRT-KVMKIDGETMKLATPITASEVLNQHPDHRLFESQSLRNLGLRATPLEPHHQLHPKALYFLLQLPPLPAHAPPLRRVQSGLHASA

Query:  TDRLEWLMLSRRSISDLHVAR--PPEPSAAS-----LQVKFRLSTAEMDRLLNECEDKAEVAQRILNLY
        +DRLE LMLSRRS+SDL   R  P   S AS     +Q+K R+   E +RL+ E + K E A+RI++L+
Subjt:  TDRLEWLMLSRRSISDLHVAR--PPEPSAAS-----LQVKFRLSTAEMDRLLNECEDKAEVAQRILNLY

SwissProt top hitse value%identityAlignment
Q6NLC8 Uncharacterized protein At1g664801.5e-2938.35Show/hide
Query:  MGNAMGGGRRRKGRTKVMKIDGETMKLATPITASEVLNQHPDHRLFESQSLRNLGLRATPLEPHHQLHPKALYFLLQLPPLPAHAP--------PLRRVQ
        MGN++   R+   R KVMKIDGET ++ TP+TA EV   +P + L +SQ++++ G+R+ PLEP+  L PK  YFL++LP LP            P RRV 
Subjt:  MGNAMGGGRRRKGRTKVMKIDGETMKLATPITASEVLNQHPDHRLFESQSLRNLGLRATPLEPHHQLHPKALYFLLQLPPLPAHAP--------PLRRVQ

Query:  SGLHASATDRLEWLMLSRRSISDLHVARP-------PEPSAASLQVKFRLSTAEMDRLLNE-CEDKAEVAQRILNLYGRDTDRFRGGQGQLRSTAQASTG
        SG+H  A +RL+ LMLSRR++SD+ + R        PE       V+ RL  +++ +L+ E   D + +A++IL +Y   +    GG+G +    +  +G
Subjt:  SGLHASATDRLEWLMLSRRSISDLHVARP-------PEPSAASLQVKFRLSTAEMDRLLNE-CEDKAEVAQRILNLYGRDTDRFRGGQGQLRSTAQASTG

Query:  --KARE
          KARE
Subjt:  --KARE

Arabidopsis top hitse value%identityAlignment
AT1G66480.1 plastid movement impaired 21.1e-3038.35Show/hide
Query:  MGNAMGGGRRRKGRTKVMKIDGETMKLATPITASEVLNQHPDHRLFESQSLRNLGLRATPLEPHHQLHPKALYFLLQLPPLPAHAP--------PLRRVQ
        MGN++   R+   R KVMKIDGET ++ TP+TA EV   +P + L +SQ++++ G+R+ PLEP+  L PK  YFL++LP LP            P RRV 
Subjt:  MGNAMGGGRRRKGRTKVMKIDGETMKLATPITASEVLNQHPDHRLFESQSLRNLGLRATPLEPHHQLHPKALYFLLQLPPLPAHAP--------PLRRVQ

Query:  SGLHASATDRLEWLMLSRRSISDLHVARP-------PEPSAASLQVKFRLSTAEMDRLLNE-CEDKAEVAQRILNLYGRDTDRFRGGQGQLRSTAQASTG
        SG+H  A +RL+ LMLSRR++SD+ + R        PE       V+ RL  +++ +L+ E   D + +A++IL +Y   +    GG+G +    +  +G
Subjt:  SGLHASATDRLEWLMLSRRSISDLHVARP-------PEPSAASLQVKFRLSTAEMDRLLNE-CEDKAEVAQRILNLYGRDTDRFRGGQGQLRSTAQASTG

Query:  --KARE
          KARE
Subjt:  --KARE

AT1G71015.1 unknown protein3.7e-2339.02Show/hide
Query:  MGNAMGGGRRRKGRTKVMKIDGETMKLATPITASEVLNQHPDHRLFESQSLRNLGLRATPLEPHHQLHPKALYFLLQLPPLPAHAPPLRRVQSGLHASAT
        MGN++G     K    +M I+GE+ KL TP+ A  V+   P H L ES++++ LG+RA PLEPH  L  K +YF+++LP       P RRV+SG+  SA 
Subjt:  MGNAMGGGRRRKGRTKVMKIDGETMKLATPITASEVLNQHPDHRLFESQSLRNLGLRATPLEPHHQLHPKALYFLLQLPPLPAHAPPLRRVQSGLHASAT

Query:  DRLEWLMLSRRSISDLHVARPP----EPSAASLQVKFRLSTAEMDRLLNECEDKAEVAQRILNL
        +RLE L LSRRS SDL V +      +       VK +L   ++++L  E E  ++ + +I  L
Subjt:  DRLEWLMLSRRSISDLHVARPP----EPSAASLQVKFRLSTAEMDRLLNECEDKAEVAQRILNL

AT2G01340.1 Encodes a protein whose expression is responsive to nematode infection.2.6e-3243.07Show/hide
Query:  MGNAMGGGRRRKGRTKVMKIDGETMKLATPITASEVLNQHPDHRLFESQSLRNLGLRATPLEPHHQLHPKALYFLLQLPPLPAHAPPLRRVQSGLHASAT
        MGN++GG    K  TKVMKIDGET KL TP+TA EVL   P H L +S+S+++ G RA PLE   +L  K LYF+++    P    P RRV+SG+H SA 
Subjt:  MGNAMGGGRRRKGRTKVMKIDGETMKLATPITASEVLNQHPDHRLFESQSLRNLGLRATPLEPHHQLHPKALYFLLQLPPLPAHAPPLRRVQSGLHASAT

Query:  DRLEWLMLSRRSISDLHVARPP------EPSAASLQVKFRLSTAEMDRLLNECEDKAEVAQRILNLY---GRDTDRF---RGGQGQLRSTAQASTGKARE
        +RLE LML+RRS SDL + +PP      E   A  +VK R+  AE+++L+ E   +AE  Q+I  L+    R  + +   R  +    +TA A+T   R 
Subjt:  DRLEWLMLSRRSISDLHVARPP------EPSAASLQVKFRLSTAEMDRLLNECEDKAEVAQRILNLY---GRDTDRF---RGGQGQLRSTAQASTGKARE

Query:  VR
        V+
Subjt:  VR

AT5G37840.1 BEST Arabidopsis thaliana protein match is: plastid movement impaired 2 (TAIR:AT1G66480.1)7.8e-2940.48Show/hide
Query:  RKGRTKVMKIDGETMKLATPITASEVLNQHPDHRLFESQSLRNLGLRATPLEPHHQLHPKALYFLLQLPPL-PAHAPPLRRVQSG-LHASATDRLEWLML
        R+ + KVMKIDG+  +L TP+TAS+   ++P   L +S++++ LG+RA PLEP+  L P   YFL+ LPP+   +  P RRV SG +H  A +RLE LML
Subjt:  RKGRTKVMKIDGETMKLATPITASEVLNQHPDHRLFESQSLRNLGLRATPLEPHHQLHPKALYFLLQLPPL-PAHAPPLRRVQSG-LHASATDRLEWLML

Query:  SRRSISDLHVARP----PEPSAASLQVKFRLSTAEMDRLLNECEDKAEVAQRILNLYGRDTDRFRGGQ
        SRR++SD+  AR       P     +V+ RL  +++ +L+ E  D +EVA +I++ Y   +   +GG+
Subjt:  SRRSISDLHVARP----PEPSAASLQVKFRLSTAEMDRLLNECEDKAEVAQRILNLYGRDTDRFRGGQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAACGCCATGGGAGGAGGACGAAGAAGAAAAGGAAGAACAAAAGTGATGAAAATTGACGGCGAAACCATGAAATTAGCCACTCCAATCACAGCCTCGGAAGTTCT
AAACCAGCATCCGGACCACCGGCTGTTCGAATCCCAATCCCTCAGAAATCTGGGCCTCAGAGCCACCCCGTTGGAGCCCCACCACCAACTCCACCCCAAAGCCCTCTATT
TCCTCCTCCAATTGCCGCCGCTCCCCGCCCACGCGCCGCCGCTCCGCCGCGTCCAATCCGGCCTCCACGCCTCCGCCACCGATCGCCTCGAGTGGCTGATGCTCTCTCGC
CGCTCCATTTCCGACCTCCACGTCGCTCGGCCGCCGGAACCATCCGCCGCCTCGCTGCAGGTCAAGTTCCGGCTGTCGACGGCGGAGATGGACAGGCTCCTCAACGAATG
CGAGGATAAGGCGGAGGTGGCCCAGAGGATCCTCAATTTGTATGGCAGAGACACAGACCGATTTCGCGGCGGCCAAGGTCAGCTGCGGAGCACGGCCCAAGCGAGTACCG
GTAAAGCGCGTGAGGTGCGGTTTCTTGCCACTCTTTTTCATTTT
mRNA sequenceShow/hide mRNA sequence
ATGGGAAACGCCATGGGAGGAGGACGAAGAAGAAAAGGAAGAACAAAAGTGATGAAAATTGACGGCGAAACCATGAAATTAGCCACTCCAATCACAGCCTCGGAAGTTCT
AAACCAGCATCCGGACCACCGGCTGTTCGAATCCCAATCCCTCAGAAATCTGGGCCTCAGAGCCACCCCGTTGGAGCCCCACCACCAACTCCACCCCAAAGCCCTCTATT
TCCTCCTCCAATTGCCGCCGCTCCCCGCCCACGCGCCGCCGCTCCGCCGCGTCCAATCCGGCCTCCACGCCTCCGCCACCGATCGCCTCGAGTGGCTGATGCTCTCTCGC
CGCTCCATTTCCGACCTCCACGTCGCTCGGCCGCCGGAACCATCCGCCGCCTCGCTGCAGGTCAAGTTCCGGCTGTCGACGGCGGAGATGGACAGGCTCCTCAACGAATG
CGAGGATAAGGCGGAGGTGGCCCAGAGGATCCTCAATTTGTATGGCAGAGACACAGACCGATTTCGCGGCGGCCAAGGTCAGCTGCGGAGCACGGCCCAAGCGAGTACCG
GTAAAGCGCGTGAGGTGCGGTTTCTTGCCACTCTTTTTCATTTT
Protein sequenceShow/hide protein sequence
MGNAMGGGRRRKGRTKVMKIDGETMKLATPITASEVLNQHPDHRLFESQSLRNLGLRATPLEPHHQLHPKALYFLLQLPPLPAHAPPLRRVQSGLHASATDRLEWLMLSR
RSISDLHVARPPEPSAASLQVKFRLSTAEMDRLLNECEDKAEVAQRILNLYGRDTDRFRGGQGQLRSTAQASTGKAREVRFLATLFHF