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MS019127 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019127
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionOlfactory receptor 4C13 like
Genome locationscaffold20:1742253..1742678
RNA-Seq ExpressionMS019127
SyntenyMS019127
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607004.1 hypothetical protein SDJN03_00346, partial [Cucurbita argyrosperma subsp. sororia]7.3e-3971.23Show/hide
Query:  MARPFPSFSN-----PFSSPNFSSLLASIAAFSIFSLVIFLCASSRKSKKSSNRMQRNLNFVSKINSNISSRAVSMAKLVSWRKVEAADEEE-LEERRRG
        MA+PFPSFSN     PFSSP   SL+ASIA  SIF+LVIFLC SSRKSKK     QR  NFV+K+NSNISSRA+S+AK++SWRKVEAADE+E       G
Subjt:  MARPFPSFSN-----PFSSPNFSSLLASIAAFSIFSLVIFLCASSRKSKKSSNRMQRNLNFVSKINSNISSRAVSMAKLVSWRKVEAADEEE-LEERRRG

Query:  DCDLISDD-DDEVWRKTIIRGERCRPLEFSGKIDYDSEGNLLGDSK
          DL  DD DDEVWRKTIIRGERCRPLEFSGKIDYDS+GNLL DSK
Subjt:  DCDLISDD-DDEVWRKTIIRGERCRPLEFSGKIDYDSEGNLLGDSK

KAG7036703.1 hypothetical protein SDJN02_00323, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-3971.72Show/hide
Query:  MARPFPSFSN-----PFSSPNFSSLLASIAAFSIFSLVIFLCASSRKSKKSSNRMQRNLNFVSKINSNISSRAVSMAKLVSWRKVEAADEEELEERRRGD
        MA+PFPSFSN     PFSSP   SL+ASIA  SIF+LVIFLC SSRKSKK     QR  NFV+K+NSNISSRA+S+AK++SWRKVEAADE+E      G 
Subjt:  MARPFPSFSN-----PFSSPNFSSLLASIAAFSIFSLVIFLCASSRKSKKSSNRMQRNLNFVSKINSNISSRAVSMAKLVSWRKVEAADEEELEERRRGD

Query:  CDLISDD-DDEVWRKTIIRGERCRPLEFSGKIDYDSEGNLLGDSK
         DL  DD DDEVWRKTIIRGERCRPLEFSGKIDYDS+GNLL DSK
Subjt:  CDLISDD-DDEVWRKTIIRGERCRPLEFSGKIDYDSEGNLLGDSK

KGN57848.1 hypothetical protein Csa_010872 [Cucumis sativus]8.9e-3765.77Show/hide
Query:  MARPFPSFSN-------PFSSPNFSSLLASIAA-FSIFSLVIFLCASSRKSKKSSNRMQRNLNFVSKINSNISSRAVSMAKLVSWRKVEAADEEELEERR
        MARPFP+ SN        F S +FS L+ S +   SIF+L+IFLC SSRKS KS    Q   NFVSK+NSNISSRA+SMAK++SWRKVEAA+EEE EE  
Subjt:  MARPFPSFSN-------PFSSPNFSSLLASIAA-FSIFSLVIFLCASSRKSKKSSNRMQRNLNFVSKINSNISSRAVSMAKLVSWRKVEAADEEELEERR

Query:  RGD--CDLI-SDDDDEVWRKTIIRGERCRPLEFSGKIDYDSEGNLLGDS
        RG   CD I  D+++EVWRKTIIRGERCRPLEFSGKIDYDS+GNLL DS
Subjt:  RGD--CDLI-SDDDDEVWRKTIIRGERCRPLEFSGKIDYDSEGNLLGDS

TYK22452.1 hypothetical protein E5676_scaffold712G00010 [Cucumis melo var. makuwa]3.2e-3464.38Show/hide
Query:  MARPFPSFSN-------PFSSPNFS-SLLASIAAFSIFSLVIFLCASSRKSKKSSNRMQRNLNFVSKINSNISSRAVSMAKLVSWRKVEAADEEELEERR
        MARPFP+ SN        F S +FS  +L++    SIF+L+IFLC SS KS KS    Q    FVSK+NSNISSRA+SMAK++SWRKVEAADE E EER 
Subjt:  MARPFPSFSN-------PFSSPNFS-SLLASIAAFSIFSLVIFLCASSRKSKKSSNRMQRNLNFVSKINSNISSRAVSMAKLVSWRKVEAADEEELEERR

Query:  RGDCDLISDDDDEVWRKTIIRGERCRPLEFSGKIDYDSEGNLLGDS
         G CD + +D++EVWRKTIIRGERCRPLEFSGKIDYDS+GNLL DS
Subjt:  RGDCDLISDDDDEVWRKTIIRGERCRPLEFSGKIDYDSEGNLLGDS

XP_038906595.1 uncharacterized protein LOC120092546 [Benincasa hispida]5.4e-3465Show/hide
Query:  MARPFPSFSN----------PFSSPNFSSLLASIAAFSIFSLVIFLCASSRKSKKSSNRMQRNLNFVSKINSNISSRAVSMAKLVSWRKVEAADEEELEE
        MAR FPS SN          PFSS NFS L++SIA  SIF+LV+FLC SSRKS KS    Q+  NFVSK+NSNISSRA+SMAK++SWRKVEAADEE+ EE
Subjt:  MARPFPSFSN----------PFSSPNFSSLLASIAAFSIFSLVIFLCASSRKSKKSSNRMQRNLNFVSKINSNISSRAVSMAKLVSWRKVEAADEEELEE

Query:  RRRGDCDLISD----DDDEVWRKTIIRGERCRPLEFSGKI
         RRG C+L  D    D++EVWRKTIIRGERCRPLEFS  +
Subjt:  RRRGDCDLISD----DDDEVWRKTIIRGERCRPLEFSGKI

TrEMBL top hitse value%identityAlignment
A0A0A0L7R8 Uncharacterized protein4.3e-3765.77Show/hide
Query:  MARPFPSFSN-------PFSSPNFSSLLASIAA-FSIFSLVIFLCASSRKSKKSSNRMQRNLNFVSKINSNISSRAVSMAKLVSWRKVEAADEEELEERR
        MARPFP+ SN        F S +FS L+ S +   SIF+L+IFLC SSRKS KS    Q   NFVSK+NSNISSRA+SMAK++SWRKVEAA+EEE EE  
Subjt:  MARPFPSFSN-------PFSSPNFSSLLASIAA-FSIFSLVIFLCASSRKSKKSSNRMQRNLNFVSKINSNISSRAVSMAKLVSWRKVEAADEEELEERR

Query:  RGD--CDLI-SDDDDEVWRKTIIRGERCRPLEFSGKIDYDSEGNLLGDS
        RG   CD I  D+++EVWRKTIIRGERCRPLEFSGKIDYDS+GNLL DS
Subjt:  RGD--CDLI-SDDDDEVWRKTIIRGERCRPLEFSGKIDYDSEGNLLGDS

A0A314V248 Uncharacterized protein2.1e-2351.66Show/hide
Query:  MARPF-PSFS----NPFSSPNFSSLLASIAAFSIFSLVIFLCASSRKSKKS--------SNRMQRNLNFVSKINSNISSRAVSMAKLVSWRKVEAADEEE
        MARP  PSFS    + F  P+   L A +  FS+FSL+IFLCA S KSKKS        +N   +++ F++K+NS ISS+A++MAK+VSWRK+EA +E+ 
Subjt:  MARPF-PSFS----NPFSSPNFSSLLASIAAFSIFSLVIFLCASSRKSKKS--------SNRMQRNLNFVSKINSNISSRAVSMAKLVSWRKVEAADEEE

Query:  LEERRRGDCDLISDDDDEVWRKTIIRGERCRPLEFSGKIDYDSEGNLLGDS
             + D D     DD VWRK+II GERC PL FSGKIDYDSEGNL  +S
Subjt:  LEERRRGDCDLISDDDDEVWRKTIIRGERCRPLEFSGKIDYDSEGNLLGDS

A0A5A7V4T5 Uncharacterized protein5.5e-2478.48Show/hide
Query:  INSNISSRAVSMAKLVSWRKVEAADEEELEERRRGDCDLISDDDDEVWRKTIIRGERCRPLEFSGKIDYDSEGNLLGDS
        +NSNISSRA+SMAK++SWRKVEAADE E EER  G CD + +D++EVWRKTIIRGERCRPLEFSGKIDYDS+GNLL DS
Subjt:  INSNISSRAVSMAKLVSWRKVEAADEEELEERRRGDCDLISDDDDEVWRKTIIRGERCRPLEFSGKIDYDSEGNLLGDS

A0A5D3DFS8 Uncharacterized protein1.5e-3464.38Show/hide
Query:  MARPFPSFSN-------PFSSPNFS-SLLASIAAFSIFSLVIFLCASSRKSKKSSNRMQRNLNFVSKINSNISSRAVSMAKLVSWRKVEAADEEELEERR
        MARPFP+ SN        F S +FS  +L++    SIF+L+IFLC SS KS KS    Q    FVSK+NSNISSRA+SMAK++SWRKVEAADE E EER 
Subjt:  MARPFPSFSN-------PFSSPNFS-SLLASIAAFSIFSLVIFLCASSRKSKKSSNRMQRNLNFVSKINSNISSRAVSMAKLVSWRKVEAADEEELEERR

Query:  RGDCDLISDDDDEVWRKTIIRGERCRPLEFSGKIDYDSEGNLLGDS
         G CD + +D++EVWRKTIIRGERCRPLEFSGKIDYDS+GNLL DS
Subjt:  RGDCDLISDDDDEVWRKTIIRGERCRPLEFSGKIDYDSEGNLLGDS

V4S8Q0 Uncharacterized protein2.1e-2348.32Show/hide
Query:  MARP---FPSFSNPFSSPNFSSLLASIAAFSIFSLVIFLCASSRKSKKS--------SNRMQRNLNFVSKINSNISSRAVSMAKLVSWRKVEAADEEELE
        MARP    P  +  F S  FS   A IA  S+FSLV FLCAS R++K S        S++    +  ++K+NSNIS +A  + KL+SW+KV+  DE    
Subjt:  MARP---FPSFSNPFSSPNFSSLLASIAAFSIFSLVIFLCASSRKSKKS--------SNRMQRNLNFVSKINSNISSRAVSMAKLVSWRKVEAADEEELE

Query:  ERRRGDCDLISDDDDEVWRKTIIRGERCRPLEFSGKIDYDSEGNLLGDS
                    DDD VWR+TI+RGERCRPL+FSGKI+YDSEGNLL DS
Subjt:  ERRRGDCDLISDDDDEVWRKTIIRGERCRPLEFSGKIDYDSEGNLLGDS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G49000.1 unknown protein3.6e-0443.24Show/hide
Query:  DDDDEVWRKTIIRGERCRPLEFSGKIDYDSEGNLLGD
        +++  +W++ I+ G +C PL+FSG I YDS G LL +
Subjt:  DDDDEVWRKTIIRGERCRPLEFSGKIDYDSEGNLLGD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAGGCCTTTCCCCTCCTTTTCGAATCCATTTTCATCGCCAAATTTCTCATCGCTCCTCGCTTCAATCGCAGCCTTCTCAATTTTCTCACTCGTGATTTTCCTCTG
CGCTTCGTCGAGAAAGTCGAAGAAATCATCGAACCGGATGCAGAGGAATCTCAATTTCGTCTCCAAAATCAACAGCAACATCAGTTCTAGGGCTGTGTCGATGGCGAAGT
TGGTCTCGTGGCGGAAGGTGGAGGCGGCCGATGAAGAAGAATTAGAAGAAAGAAGAAGAGGCGATTGCGATCTGATCAGTGATGATGACGATGAGGTTTGGAGGAAGACG
ATCATCAGAGGAGAACGGTGTCGTCCGCTCGAATTTTCCGGGAAAATTGATTACGATTCCGAAGGAAATCTTCTCGGCGATTCCAAAAGCGTTGCG
mRNA sequenceShow/hide mRNA sequence
ATGGCCAGGCCTTTCCCCTCCTTTTCGAATCCATTTTCATCGCCAAATTTCTCATCGCTCCTCGCTTCAATCGCAGCCTTCTCAATTTTCTCACTCGTGATTTTCCTCTG
CGCTTCGTCGAGAAAGTCGAAGAAATCATCGAACCGGATGCAGAGGAATCTCAATTTCGTCTCCAAAATCAACAGCAACATCAGTTCTAGGGCTGTGTCGATGGCGAAGT
TGGTCTCGTGGCGGAAGGTGGAGGCGGCCGATGAAGAAGAATTAGAAGAAAGAAGAAGAGGCGATTGCGATCTGATCAGTGATGATGACGATGAGGTTTGGAGGAAGACG
ATCATCAGAGGAGAACGGTGTCGTCCGCTCGAATTTTCCGGGAAAATTGATTACGATTCCGAAGGAAATCTTCTCGGCGATTCCAAAAGCGTTGCG
Protein sequenceShow/hide protein sequence
MARPFPSFSNPFSSPNFSSLLASIAAFSIFSLVIFLCASSRKSKKSSNRMQRNLNFVSKINSNISSRAVSMAKLVSWRKVEAADEEELEERRRGDCDLISDDDDEVWRKT
IIRGERCRPLEFSGKIDYDSEGNLLGDSKSVA