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MS019128 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019128
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCold-regulated protein
Genome locationscaffold20:1748802..1749032
RNA-Seq ExpressionMS019128
SyntenyMS019128
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008457074.1 PREDICTED: uncharacterized protein LOC103496842 [Cucumis melo]7.7e-3593.51Show/hide
Query:  MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAAAAVVEWPVGALVYCFRHAKGRRIMAHPATVVYPSVSNAVPI
        MAVG+GVPICIECGTHSNPCRCKVVGPTLGFLAFA AAVVEWPVGALV+CFRH KGRRIMAHPATVVYPSVSNA+PI
Subjt:  MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAAAAVVEWPVGALVYCFRHAKGRRIMAHPATVVYPSVSNAVPI
XP_022143411.1 uncharacterized protein LOC111013291 [Momordica charantia]1.1e-36100Show/hide
Query:  MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAAAAVVEWPVGALVYCFRHAKGRRIMAHPATVVYPSVSNAVPI
        MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAAAAVVEWPVGALVYCFRHAKGRRIMAHPATVVYPSVSNAVPI
Subjt:  MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAAAAVVEWPVGALVYCFRHAKGRRIMAHPATVVYPSVSNAVPI
XP_022935253.1 uncharacterized protein LOC111442190 [Cucurbita moschata]2.9e-3492.21Show/hide
Query:  MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAAAAVVEWPVGALVYCFRHAKGRRIMAHPATVVYPSVSNAVPI
        MAVGIGVP+C+ECGTH NPCRCKVVGPTLGFLAFA AAVVEWPVGALVYCFRH KGRRIMAHP TVVYPSVSNAVPI
Subjt:  MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAAAAVVEWPVGALVYCFRHAKGRRIMAHPATVVYPSVSNAVPI
XP_023528466.1 uncharacterized protein LOC111791385 [Cucurbita pepo subsp. pepo]2.2e-3493.51Show/hide
Query:  MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAAAAVVEWPVGALVYCFRHAKGRRIMAHPATVVYPSVSNAVPI
        MAVGIGVPIC+ECGTH NPCRCKVVGPTLGFLAFA AAVVEWPVGALVYCFRH KGRRIMAHP TVVYPSVSNAVPI
Subjt:  MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAAAAVVEWPVGALVYCFRHAKGRRIMAHPATVVYPSVSNAVPI
XP_031737948.1 uncharacterized protein LOC116402578 [Cucumis sativus]1.3e-3494.81Show/hide
Query:  MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAAAAVVEWPVGALVYCFRHAKGRRIMAHPATVVYPSVSNAVPI
        M VGIGVPICIECGTHSNPCRCKVVGPTLGFLAFA AAVVEWPVGALV+CFRH KGRRIMAHPATVVYPSVSNAVPI
Subjt:  MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAAAAVVEWPVGALVYCFRHAKGRRIMAHPATVVYPSVSNAVPI
TrEMBL top hitse value%identityAlignment
A0A0A0LA45 Uncharacterized protein6.4e-3594.81Show/hide
Query:  MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAAAAVVEWPVGALVYCFRHAKGRRIMAHPATVVYPSVSNAVPI
        M VGIGVPICIECGTHSNPCRCKVVGPTLGFLAFA AAVVEWPVGALV+CFRH KGRRIMAHPATVVYPSVSNAVPI
Subjt:  MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAAAAVVEWPVGALVYCFRHAKGRRIMAHPATVVYPSVSNAVPI
A0A1S3C5C8 uncharacterized protein LOC1034968423.7e-3593.51Show/hide
Query:  MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAAAAVVEWPVGALVYCFRHAKGRRIMAHPATVVYPSVSNAVPI
        MAVG+GVPICIECGTHSNPCRCKVVGPTLGFLAFA AAVVEWPVGALV+CFRH KGRRIMAHPATVVYPSVSNA+PI
Subjt:  MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAAAAVVEWPVGALVYCFRHAKGRRIMAHPATVVYPSVSNAVPI
A0A218XJX3 Uncharacterized protein2.1e-3388.31Show/hide
Query:  MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAAAAVVEWPVGALVYCFRHAKGRRIMAHPATVVYPSVSNAVPI
        MA+G+GVPIC+ECGT SNPCRCKVVGPTLGFLAF AAAVVEWP+GALVYCFRH KGRRIMAHPATVVYPSV+NA+PI
Subjt:  MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAAAAVVEWPVGALVYCFRHAKGRRIMAHPATVVYPSVSNAVPI
A0A6J1CQ64 uncharacterized protein LOC1110132915.2e-37100Show/hide
Query:  MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAAAAVVEWPVGALVYCFRHAKGRRIMAHPATVVYPSVSNAVPI
        MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAAAAVVEWPVGALVYCFRHAKGRRIMAHPATVVYPSVSNAVPI
Subjt:  MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAAAAVVEWPVGALVYCFRHAKGRRIMAHPATVVYPSVSNAVPI
A0A6J1FA13 uncharacterized protein LOC1114421901.4e-3492.21Show/hide
Query:  MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAAAAVVEWPVGALVYCFRHAKGRRIMAHPATVVYPSVSNAVPI
        MAVGIGVP+C+ECGTH NPCRCKVVGPTLGFLAFA AAVVEWPVGALVYCFRH KGRRIMAHP TVVYPSVSNAVPI
Subjt:  MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAAAAVVEWPVGALVYCFRHAKGRRIMAHPATVVYPSVSNAVPI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G03341.1 unknown protein1.2e-2874.65Show/hide
Query:  VPICIECGTHSNPCRCKVVGPTLGFLAFAAAAVVEWPVGALVYCFRHAKGRRIMAHPATVVYPSVSNAVPI
        +PIC++CGT  NPCRCKVVGPTLG +AF AA +VEWPVGALVY F+HAKGRRIM HPAT VYP VS ++PI
Subjt:  VPICIECGTHSNPCRCKVVGPTLGFLAFAAAAVVEWPVGALVYCFRHAKGRRIMAHPATVVYPSVSNAVPI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGTTGGAATCGGCGTTCCGATCTGCATTGAATGTGGAACCCACAGCAACCCGTGCCGGTGCAAGGTGGTGGGGCCGACGCTGGGATTCTTGGCTTTCGCGGCGGC
GGCGGTGGTGGAGTGGCCGGTCGGAGCTCTGGTGTACTGCTTCCGGCACGCGAAGGGCCGCCGCATCATGGCGCATCCGGCCACCGTCGTTTACCCTTCCGTCTCTAATG
CGGTTCCAATT
mRNA sequenceShow/hide mRNA sequence
ATGGCCGTTGGAATCGGCGTTCCGATCTGCATTGAATGTGGAACCCACAGCAACCCGTGCCGGTGCAAGGTGGTGGGGCCGACGCTGGGATTCTTGGCTTTCGCGGCGGC
GGCGGTGGTGGAGTGGCCGGTCGGAGCTCTGGTGTACTGCTTCCGGCACGCGAAGGGCCGCCGCATCATGGCGCATCCGGCCACCGTCGTTTACCCTTCCGTCTCTAATG
CGGTTCCAATT
Protein sequenceShow/hide protein sequence
MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAAAAVVEWPVGALVYCFRHAKGRRIMAHPATVVYPSVSNAVPI