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MS019131 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019131
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionzf-RVT domain-containing protein
Genome locationscaffold20:1785626..1785888
RNA-Seq ExpressionMS019131
SyntenyMS019131
Gene Ontology termsGO:0005622 - intracellular (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN72359.1 hypothetical protein VITISV_000131 [Vitis vinifera]7.0e-0837.93Show/hide
Query:  CCLCWKGAKTLDHLFIHCPLALKGW-QFVSTFCINIYMPKDVESWLLECFHGWHFNGKARVLWRYVFRAFHWNVWMERISRSFEDKA
        C LC K  +T+DHLF+HC L +  W +   +  ++   P+ +   L   F+G+ F+ +  VLW+    A  W VW ER +R FEDKA
Subjt:  CCLCWKGAKTLDHLFIHCPLALKGW-QFVSTFCINIYMPKDVESWLLECFHGWHFNGKARVLWRYVFRAFHWNVWMERISRSFEDKA

RVW25634.1 putative ribonuclease H protein [Vitis vinifera]7.0e-0837.93Show/hide
Query:  CCLCWKGAKTLDHLFIHCPLALKGW-QFVSTFCINIYMPKDVESWLLECFHGWHFNGKARVLWRYVFRAFHWNVWMERISRSFEDKA
        C LC K  +T+DHLF+HC L +  W +   +  ++   P+ +   L   F+G+ F+ +  VLW+    A  W VW ER +R FEDKA
Subjt:  CCLCWKGAKTLDHLFIHCPLALKGW-QFVSTFCINIYMPKDVESWLLECFHGWHFNGKARVLWRYVFRAFHWNVWMERISRSFEDKA

RVW33074.1 putative ribonuclease H protein [Vitis vinifera]7.0e-0837.93Show/hide
Query:  CCLCWKGAKTLDHLFIHCPLALKGW-QFVSTFCINIYMPKDVESWLLECFHGWHFNGKARVLWRYVFRAFHWNVWMERISRSFEDKA
        C LC K  +T+DHLF+HC L +  W +   +  ++   P+ +   L   F+G+ F+ +  VLW+    A  W VW ER +R FEDKA
Subjt:  CCLCWKGAKTLDHLFIHCPLALKGW-QFVSTFCINIYMPKDVESWLLECFHGWHFNGKARVLWRYVFRAFHWNVWMERISRSFEDKA

RVW70235.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]7.0e-0837.93Show/hide
Query:  CCLCWKGAKTLDHLFIHCPLALKGW-QFVSTFCINIYMPKDVESWLLECFHGWHFNGKARVLWRYVFRAFHWNVWMERISRSFEDKA
        C LC K  +T+DHLF+HC L +  W +   +  ++   P+ +   L   F+G+ F+ +  VLW+    A  W VW ER +R FEDKA
Subjt:  CCLCWKGAKTLDHLFIHCPLALKGW-QFVSTFCINIYMPKDVESWLLECFHGWHFNGKARVLWRYVFRAFHWNVWMERISRSFEDKA

RVX17938.1 CDP-diacylglycerol--serine O-phosphatidyltransferase 1 [Vitis vinifera]7.0e-0837.93Show/hide
Query:  CCLCWKGAKTLDHLFIHCPLALKGW-QFVSTFCINIYMPKDVESWLLECFHGWHFNGKARVLWRYVFRAFHWNVWMERISRSFEDKA
        C LC K  +T+DHLF+HC L +  W +   +  ++   P+ +   L   F+G+ F+ +  VLW+    A  W VW ER +R FEDKA
Subjt:  CCLCWKGAKTLDHLFIHCPLALKGW-QFVSTFCINIYMPKDVESWLLECFHGWHFNGKARVLWRYVFRAFHWNVWMERISRSFEDKA

TrEMBL top hitse value%identityAlignment
A0A2N9EFE5 Reverse transcriptase domain-containing protein8.9e-0938.37Show/hide
Query:  CCLCWKGAKTLDHLFIHCPLALKGWQFV-STFCINIYMPKDVESWLLECFHGWHFNGKARVLWRYVFRAFHWNVWMERISRSFEDK
        CC+C    ++  HL +HCP+A   W F+ S F +   MP+DV   LL C+       K + LW  +     W +W ER SRSFE K
Subjt:  CCLCWKGAKTLDHLFIHCPLALKGWQFV-STFCINIYMPKDVESWLLECFHGWHFNGKARVLWRYVFRAFHWNVWMERISRSFEDK

A0A2N9FPK5 zf-RVT domain-containing protein6.1e-1040Show/hide
Query:  CCLCWKGAKTLDHLFIHCPLALKGWQFV-STFCINIYMPKDVESWLLECFHGWHFNGKARVLWRYVFRAFHWNVWMERISRSFED
        CC+C KGA++++HLF+HCP A + W  V   F +   MP+ +   LLEC+ G   N +  ++WR +     W +W ER  RSFE+
Subjt:  CCLCWKGAKTLDHLFIHCPLALKGWQFV-STFCINIYMPKDVESWLLECFHGWHFNGKARVLWRYVFRAFHWNVWMERISRSFED

A0A2N9G054 zf-RVT domain-containing protein6.1e-1040Show/hide
Query:  CCLCWKGAKTLDHLFIHCPLALKGWQFV-STFCINIYMPKDVESWLLECFHGWHFNGKARVLWRYVFRAFHWNVWMERISRSFED
        CC+C KGA++++HLF+HCP A + W  V   F +   MP+ +   LLEC+ G   N +  ++WR +     W +W ER  RSFE+
Subjt:  CCLCWKGAKTLDHLFIHCPLALKGWQFV-STFCINIYMPKDVESWLLECFHGWHFNGKARVLWRYVFRAFHWNVWMERISRSFED

A0A2N9H7R1 Reverse transcriptase domain-containing protein1.2e-0838.82Show/hide
Query:  CCLCWKGAKTLDHLFIHCPLALKGWQFV-STFCINIYMPKDVESWLLECFHGWHFNGKARVLWRYVFRAFHWNVWMERISRSFED
        CC+C KGA++++HL +HCP A + W  V   F +   MP+ +   LLEC+ G     +  ++WR +     W VW ER  RSFE+
Subjt:  CCLCWKGAKTLDHLFIHCPLALKGWQFV-STFCINIYMPKDVESWLLECFHGWHFNGKARVLWRYVFRAFHWNVWMERISRSFED

A0A2N9JAE3 Uncharacterized protein5.2e-0939.53Show/hide
Query:  CCLCWKGAKTLDHLFIHCPLALKGWQFV-STFCINIYMPKDVESWLLECFHGWHFNGKARVLWRYVFRAFHWNVWMERISRSFEDK
        CC+C    ++  HL +HCPLA   W F+ S F +   MP+DV   LL C+       K + LW  +     W +W ER SRSFE K
Subjt:  CCLCWKGAKTLDHLFIHCPLALKGWQFV-STFCINIYMPKDVESWLLECFHGWHFNGKARVLWRYVFRAFHWNVWMERISRSFEDK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGCTGTCTTTGCTGGAAAGGGGCAAAGACCTTGGATCATCTGTTCATTCACTGTCCCCTTGCTTTAAAAGGATGGCAGTTTGTTTCAACGTTTTGCATTAATATATATAT
GCCTAAAGACGTGGAGAGCTGGTTATTAGAATGTTTTCACGGGTGGCACTTCAACGGAAAGGCTAGAGTTTTGTGGAGATATGTGTTCAGAGCTTTTCATTGGAACGTTT
GGATGGAAAGGATCTCACGCTCCTTTGAAGACAAAGCTACT
mRNA sequenceShow/hide mRNA sequence
TGCTGTCTTTGCTGGAAAGGGGCAAAGACCTTGGATCATCTGTTCATTCACTGTCCCCTTGCTTTAAAAGGATGGCAGTTTGTTTCAACGTTTTGCATTAATATATATAT
GCCTAAAGACGTGGAGAGCTGGTTATTAGAATGTTTTCACGGGTGGCACTTCAACGGAAAGGCTAGAGTTTTGTGGAGATATGTGTTCAGAGCTTTTCATTGGAACGTTT
GGATGGAAAGGATCTCACGCTCCTTTGAAGACAAAGCTACT
Protein sequenceShow/hide protein sequence
CCLCWKGAKTLDHLFIHCPLALKGWQFVSTFCINIYMPKDVESWLLECFHGWHFNGKARVLWRYVFRAFHWNVWMERISRSFEDKAT