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MS019134 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019134
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionGPI-anchor transamidase isoform X1
Genome locationscaffold20:1800938..1801208
RNA-Seq ExpressionMS019134
SyntenyMS019134
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035739.1 hypothetical protein E6C27_scaffold403G00100 [Cucumis melo var. makuwa]6.1e-0735.16Show/hide
Query:  WWVLFSFFNLHWVFRK--VPNIMQLLYGPHLPPKGLLIWVNTVIAIMSKLWFETNQRLFHNKSKDWVKYFEVAKFEASLWCFIFPVFKNYT
        W  +FS FNL W F      +++QLL G +LP    +IW     A++ ++W E NQR+FH+K++   +    A   A+ WC +   F NY+
Subjt:  WWVLFSFFNLHWVFRK--VPNIMQLLYGPHLPPKGLLIWVNTVIAIMSKLWFETNQRLFHNKSKDWVKYFEVAKFEASLWCFIFPVFKNYT

KAA0062564.1 GPI-anchor transamidase isoform X1 [Cucumis melo var. makuwa]4.2e-0838.04Show/hide
Query:  CWWVLFSFFNLHWVFRKV--PNIMQLLYGPHLPPKGLLIWVNTVIAIMSKLWFETNQRLFHNKSKDWVKYFEVAKFEASLWCFIFPVFKNYT
        CW  L S F + W F      NI Q+L G  L     LIW N   A++S +WFE NQR+F  K   W +  ++AK  A+ WC +   F +Y+
Subjt:  CWWVLFSFFNLHWVFRKV--PNIMQLLYGPHLPPKGLLIWVNTVIAIMSKLWFETNQRLFHNKSKDWVKYFEVAKFEASLWCFIFPVFKNYT

TYK21876.1 hypothetical protein E5676_scaffold494G00090 [Cucumis melo var. makuwa]6.1e-0735.16Show/hide
Query:  WWVLFSFFNLHWVFRK--VPNIMQLLYGPHLPPKGLLIWVNTVIAIMSKLWFETNQRLFHNKSKDWVKYFEVAKFEASLWCFIFPVFKNYT
        W  +FS FNL W F      +++QLL G +LP    +IW     A++ ++W E NQR+FH+K++   +    A   A+ WC +   F NY+
Subjt:  WWVLFSFFNLHWVFRK--VPNIMQLLYGPHLPPKGLLIWVNTVIAIMSKLWFETNQRLFHNKSKDWVKYFEVAKFEASLWCFIFPVFKNYT

XP_022153214.1 uncharacterized protein LOC111020765 [Momordica charantia]3.1e-1143.01Show/hide
Query:  CWWVLFSFFNLHWVF--RKVPNIMQLLYG-PHLPPKGLLIWVNTVIAIMSKLWFETNQRLFHNKSKDWVKYFEVAKFEASLWCFIFPVFKNYT
        CW +LF  FN+ W F  +   N+ QLL+G PHL      +W+N V A++S+LWFE N RLF  K + + + F  AKF+ASLWC +   F +++
Subjt:  CWWVLFSFFNLHWVF--RKVPNIMQLLYG-PHLPPKGLLIWVNTVIAIMSKLWFETNQRLFHNKSKDWVKYFEVAKFEASLWCFIFPVFKNYT

XP_038903695.1 uncharacterized protein LOC120090219 [Benincasa hispida]2.7e-0738.04Show/hide
Query:  CWWVLFSFFNLHWVFRK--VPNIMQLLYGPHLPPKGLLIWVNTVIAIMSKLWFETNQRLFHNKSKDWVKYFEVAKFEASLWCFIFPVFKNYT
        CW  L  FFNL          N+ QLL  P       L+W N V A+++ LWFE NQR+F+NK+       E A+ +AS WC +   F+ Y+
Subjt:  CWWVLFSFFNLHWVFRK--VPNIMQLLYGPHLPPKGLLIWVNTVIAIMSKLWFETNQRLFHNKSKDWVKYFEVAKFEASLWCFIFPVFKNYT

TrEMBL top hitse value%identityAlignment
A0A5A7T2Y0 zf-RVT domain-containing protein3.0e-0735.16Show/hide
Query:  WWVLFSFFNLHWVFRK--VPNIMQLLYGPHLPPKGLLIWVNTVIAIMSKLWFETNQRLFHNKSKDWVKYFEVAKFEASLWCFIFPVFKNYT
        W  +FS FNL W F      +++QLL G +LP    +IW     A++ ++W E NQR+FH+K++   +    A   A+ WC +   F NY+
Subjt:  WWVLFSFFNLHWVFRK--VPNIMQLLYGPHLPPKGLLIWVNTVIAIMSKLWFETNQRLFHNKSKDWVKYFEVAKFEASLWCFIFPVFKNYT

A0A5A7V5N8 GPI-anchor transamidase isoform X12.0e-0838.04Show/hide
Query:  CWWVLFSFFNLHWVFRKV--PNIMQLLYGPHLPPKGLLIWVNTVIAIMSKLWFETNQRLFHNKSKDWVKYFEVAKFEASLWCFIFPVFKNYT
        CW  L S F + W F      NI Q+L G  L     LIW N   A++S +WFE NQR+F  K   W +  ++AK  A+ WC +   F +Y+
Subjt:  CWWVLFSFFNLHWVFRKV--PNIMQLLYGPHLPPKGLLIWVNTVIAIMSKLWFETNQRLFHNKSKDWVKYFEVAKFEASLWCFIFPVFKNYT

A0A5D3DC06 Mediator of RNA polymerase II transcription subunit 8 isoform X24.7e-0541.1Show/hide
Query:  PNIMQLLYGPHLPPKGLLIWVNTVIAIMSKLWFETNQRLFHNKSKDWVKYFEVAKFEASL-WCFIFPVFKNYT
        P   +L  GP LP K  LIW+N   A++S+LWFE NQ +FH K K  ++    AK  A + WC +   F +Y+
Subjt:  PNIMQLLYGPHLPPKGLLIWVNTVIAIMSKLWFETNQRLFHNKSKDWVKYFEVAKFEASL-WCFIFPVFKNYT

A0A5D3DE60 zf-RVT domain-containing protein3.0e-0735.16Show/hide
Query:  WWVLFSFFNLHWVFRK--VPNIMQLLYGPHLPPKGLLIWVNTVIAIMSKLWFETNQRLFHNKSKDWVKYFEVAKFEASLWCFIFPVFKNYT
        W  +FS FNL W F      +++QLL G +LP    +IW     A++ ++W E NQR+FH+K++   +    A   A+ WC +   F NY+
Subjt:  WWVLFSFFNLHWVFRK--VPNIMQLLYGPHLPPKGLLIWVNTVIAIMSKLWFETNQRLFHNKSKDWVKYFEVAKFEASLWCFIFPVFKNYT

A0A6J1DIE2 uncharacterized protein LOC1110207651.5e-1143.01Show/hide
Query:  CWWVLFSFFNLHWVF--RKVPNIMQLLYG-PHLPPKGLLIWVNTVIAIMSKLWFETNQRLFHNKSKDWVKYFEVAKFEASLWCFIFPVFKNYT
        CW +LF  FN+ W F  +   N+ QLL+G PHL      +W+N V A++S+LWFE N RLF  K + + + F  AKF+ASLWC +   F +++
Subjt:  CWWVLFSFFNLHWVF--RKVPNIMQLLYG-PHLPPKGLLIWVNTVIAIMSKLWFETNQRLFHNKSKDWVKYFEVAKFEASLWCFIFPVFKNYT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGTTGGTGGGTGCTCTTCTCCTTTTTCAACCTGCATTGGGTTTTCCGGAAGGTTCCAAACATAATGCAACTCCTATATGGTCCTCATCTTCCTCCGAAGGGCCTTTTGAT
TTGGGTTAACACGGTCATAGCAATTATGTCAAAACTTTGGTTTGAAACGAATCAAAGACTCTTTCATAACAAAAGCAAAGATTGGGTGAAATATTTTGAAGTAGCCAAGT
TCGAAGCTTCTCTTTGGTGTTTTATTTTCCCGGTTTTCAAGAACTATACA
mRNA sequenceShow/hide mRNA sequence
TGTTGGTGGGTGCTCTTCTCCTTTTTCAACCTGCATTGGGTTTTCCGGAAGGTTCCAAACATAATGCAACTCCTATATGGTCCTCATCTTCCTCCGAAGGGCCTTTTGAT
TTGGGTTAACACGGTCATAGCAATTATGTCAAAACTTTGGTTTGAAACGAATCAAAGACTCTTTCATAACAAAAGCAAAGATTGGGTGAAATATTTTGAAGTAGCCAAGT
TCGAAGCTTCTCTTTGGTGTTTTATTTTCCCGGTTTTCAAGAACTATACA
Protein sequenceShow/hide protein sequence
CWWVLFSFFNLHWVFRKVPNIMQLLYGPHLPPKGLLIWVNTVIAIMSKLWFETNQRLFHNKSKDWVKYFEVAKFEASLWCFIFPVFKNYT