; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS019137 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019137
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptiondouble-stranded RNA-binding protein 4-like isoform X1
Genome locationscaffold20:1816337..1818851
RNA-Seq ExpressionMS019137
SyntenyMS019137
Gene Ontology termsGO:0016075 - rRNA catabolic process (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0004525 - ribonuclease III activity (molecular function)
InterPro domainsIPR011907 - Ribonuclease III
IPR014720 - Double-stranded RNA-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581214.1 Double-stranded RNA-binding protein 4, partial [Cucurbita argyrosperma subsp. sororia]1.9e-11075.85Show/hide
Query:  IYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNL
        +YK+ LHE+ Q+SRIPLPVYQT  EGS G+PKYRSTV+VDEVHYVSPNTFRNRR AE DAARIALEYISK+ KDDGF+LL EDLM CKSILSEYTVKM+L
Subjt:  IYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNL

Query:  KRPLYTTNHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQKVKDSFPSQIQSKPMSEKSEQ
        KRP+YTT  H+GSVPIFQSTLVFDGVVYTG++SRSKKEAEQLAARAAILSL  DAGNP+SQKTL +IIASKVRLHA +QKVKDS PSQIQ K M E + +
Subjt:  KRPLYTTNHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQKVKDSFPSQIQSKPMSEKSEQ

Query:  GHVGMTVNEDIYVENASLTDEVVSGAISEIPPTTSHFQPEF---KPEASPLSVRLPIEYVPSTLEEPVGDHATGSRKRSKNRRKARKKLHVENQ
         HV  TVNED  V  A L + V  GAISEI PT SH  PEF   KP AS  S RLPIE VPST EEPVGD ATGS+KRSKN+RKARKKL +ENQ
Subjt:  GHVGMTVNEDIYVENASLTDEVVSGAISEIPPTTSHFQPEF---KPEASPLSVRLPIEYVPSTLEEPVGDHATGSRKRSKNRRKARKKLHVENQ

XP_022143454.1 double-stranded RNA-binding protein 4-like isoform X1 [Momordica charantia]7.2e-158100Show/hide
Query:  IYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNL
        IYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNL
Subjt:  IYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNL

Query:  KRPLYTTNHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQKVKDSFPSQIQSKPMSEKSEQ
        KRPLYTTNHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQKVKDSFPSQIQSKPMSEKSEQ
Subjt:  KRPLYTTNHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQKVKDSFPSQIQSKPMSEKSEQ

Query:  GHVGMTVNEDIYVENASLTDEVVSGAISEIPPTTSHFQPEFKPEASPLSVRLPIEYVPSTLEEPVGDHATGSRKRSKNRRKARKKLHVENQ
        GHVGMTVNEDIYVENASLTDEVVSGAISEIPPTTSHFQPEFKPEASPLSVRLPIEYVPSTLEEPVGDHATGSRKRSKNRRKARKKLHVENQ
Subjt:  GHVGMTVNEDIYVENASLTDEVVSGAISEIPPTTSHFQPEFKPEASPLSVRLPIEYVPSTLEEPVGDHATGSRKRSKNRRKARKKLHVENQ

XP_022935532.1 double-stranded RNA-binding protein 4-like isoform X1 [Cucurbita moschata]2.3e-11176.19Show/hide
Query:  IYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNL
        +YK+ LHEY Q+SRIPLPVYQT  EGS G+PKYRSTV+VDEVHYVSPNTFRNRR AE DAARIALEYISK+ KDDGF+LL EDLM CKSILSEYTVKM+L
Subjt:  IYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNL

Query:  KRPLYTTNHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQKVKDSFPSQIQSKPMSEKSEQ
        KRP+YTT  H+GSVPIFQSTLVFDGVVYTG++SRSKKEAEQLAARAAILSL  DAGNP+SQKTL +IIASKVRLHA +QKVKDS PSQIQ K M + + +
Subjt:  KRPLYTTNHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQKVKDSFPSQIQSKPMSEKSEQ

Query:  GHVGMTVNEDIYVENASLTDEVVSGAISEIPPTTSHFQPEF---KPEASPLSVRLPIEYVPSTLEEPVGDHATGSRKRSKNRRKARKKLHVENQ
         HV  TVNED  V  A L + V  GAISEI PT SH  PEF   KPEAS  S RLPIE VPST EEPVGD ATGS+KRSKN+RKARKKL +ENQ
Subjt:  GHVGMTVNEDIYVENASLTDEVVSGAISEIPPTTSHFQPEF---KPEASPLSVRLPIEYVPSTLEEPVGDHATGSRKRSKNRRKARKKLHVENQ

XP_038897078.1 double-stranded RNA-binding protein 8-like isoform X1 [Benincasa hispida]5.6e-11075Show/hide
Query:  IYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNL
        +YK+ LHEY Q+SRI LPVYQT  EGS+G+PKYRSTV+VDEVHYVSPNTFRNR+ AE DAARIA EYISK+TKDDGFLLL+EDLM CKSILSEYT KM+L
Subjt:  IYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNL

Query:  KRPLYTTNHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQKVKDSFPSQIQSKPMSEKSEQ
        KRP+YTT HH GSVP FQSTL FDGVVYT ++SRSKKEAEQLAARAAILSL GDA NP+SQKTL +IIASKVR HATLQKVKDS  SQIQ K M E   +
Subjt:  KRPLYTTNHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQKVKDSFPSQIQSKPMSEKSEQ

Query:  GHVGMTVNEDIYVENASLTDEVVSGAISEIPPTTSHFQPEF---KPEASPLSVRLPIEYVPSTLEEPVGDH--ATGSRKRSKNRRKARKKLHVENQ
         HV MTV+E+  V++A L + VV GAISE+ P TSHF+PEF   KPEAS   VRLPIE+VPSTLEEPVGDH  ATGS++RSKN+RKARKKL +ENQ
Subjt:  GHVGMTVNEDIYVENASLTDEVVSGAISEIPPTTSHFQPEF---KPEASPLSVRLPIEYVPSTLEEPVGDH--ATGSRKRSKNRRKARKKLHVENQ

XP_038897098.1 double-stranded RNA-binding protein 1-like isoform X2 [Benincasa hispida]5.6e-11075Show/hide
Query:  IYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNL
        +YK+ LHEY Q+SRI LPVYQT  EGS+G+PKYRSTV+VDEVHYVSPNTFRNR+ AE DAARIA EYISK+TKDDGFLLL+EDLM CKSILSEYT KM+L
Subjt:  IYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNL

Query:  KRPLYTTNHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQKVKDSFPSQIQSKPMSEKSEQ
        KRP+YTT HH GSVP FQSTL FDGVVYT ++SRSKKEAEQLAARAAILSL GDA NP+SQKTL +IIASKVR HATLQKVKDS  SQIQ K M E   +
Subjt:  KRPLYTTNHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQKVKDSFPSQIQSKPMSEKSEQ

Query:  GHVGMTVNEDIYVENASLTDEVVSGAISEIPPTTSHFQPEF---KPEASPLSVRLPIEYVPSTLEEPVGDH--ATGSRKRSKNRRKARKKLHVENQ
         HV MTV+E+  V++A L + VV GAISE+ P TSHF+PEF   KPEAS   VRLPIE+VPSTLEEPVGDH  ATGS++RSKN+RKARKKL +ENQ
Subjt:  GHVGMTVNEDIYVENASLTDEVVSGAISEIPPTTSHFQPEF---KPEASPLSVRLPIEYVPSTLEEPVGDH--ATGSRKRSKNRRKARKKLHVENQ

TrEMBL top hitse value%identityAlignment
A0A6J1CPC5 double-stranded RNA-binding protein 4-like isoform X13.5e-158100Show/hide
Query:  IYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNL
        IYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNL
Subjt:  IYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNL

Query:  KRPLYTTNHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQKVKDSFPSQIQSKPMSEKSEQ
        KRPLYTTNHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQKVKDSFPSQIQSKPMSEKSEQ
Subjt:  KRPLYTTNHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQKVKDSFPSQIQSKPMSEKSEQ

Query:  GHVGMTVNEDIYVENASLTDEVVSGAISEIPPTTSHFQPEFKPEASPLSVRLPIEYVPSTLEEPVGDHATGSRKRSKNRRKARKKLHVENQ
        GHVGMTVNEDIYVENASLTDEVVSGAISEIPPTTSHFQPEFKPEASPLSVRLPIEYVPSTLEEPVGDHATGSRKRSKNRRKARKKLHVENQ
Subjt:  GHVGMTVNEDIYVENASLTDEVVSGAISEIPPTTSHFQPEFKPEASPLSVRLPIEYVPSTLEEPVGDHATGSRKRSKNRRKARKKLHVENQ

A0A6J1F5U3 double-stranded RNA-binding protein 4-like isoform X11.1e-11176.19Show/hide
Query:  IYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNL
        +YK+ LHEY Q+SRIPLPVYQT  EGS G+PKYRSTV+VDEVHYVSPNTFRNRR AE DAARIALEYISK+ KDDGF+LL EDLM CKSILSEYTVKM+L
Subjt:  IYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNL

Query:  KRPLYTTNHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQKVKDSFPSQIQSKPMSEKSEQ
        KRP+YTT  H+GSVPIFQSTLVFDGVVYTG++SRSKKEAEQLAARAAILSL  DAGNP+SQKTL +IIASKVRLHA +QKVKDS PSQIQ K M + + +
Subjt:  KRPLYTTNHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQKVKDSFPSQIQSKPMSEKSEQ

Query:  GHVGMTVNEDIYVENASLTDEVVSGAISEIPPTTSHFQPEF---KPEASPLSVRLPIEYVPSTLEEPVGDHATGSRKRSKNRRKARKKLHVENQ
         HV  TVNED  V  A L + V  GAISEI PT SH  PEF   KPEAS  S RLPIE VPST EEPVGD ATGS+KRSKN+RKARKKL +ENQ
Subjt:  GHVGMTVNEDIYVENASLTDEVVSGAISEIPPTTSHFQPEF---KPEASPLSVRLPIEYVPSTLEEPVGDHATGSRKRSKNRRKARKKLHVENQ

A0A6J1FAT0 double-stranded RNA-binding protein 4-like isoform X21.2e-10573.47Show/hide
Query:  IYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNL
        +YK+ LHEY Q+SRIPLPVYQT  EGS G+PKYRSTV+VDEVHYVSPNTFRNRR AE DAARIALEYISK+ KDDGF+LL EDLM CKSILSEYTVKM+L
Subjt:  IYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNL

Query:  KRPLYTTNHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQKVKDSFPSQIQSKPMSEKSEQ
        KRP+YTT  H+GSVPIFQSTLVFDGVVYTG++SRSKKEAEQLAARAAILSL  DAGNP+SQKTL +IIASKVRLHA +QKVKDS PSQIQ K M + + +
Subjt:  KRPLYTTNHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQKVKDSFPSQIQSKPMSEKSEQ

Query:  GHVGMTVNEDIYVENASLTDEVVSGAISEIPPTTSHFQPEF---KPEASPLSVRLPIEYVPSTLEEPVGDHATGSRKRSKNRRKARKKLHVENQ
         HV  TVNE          D+ V+GAI +     SH  PEF   KPEAS  S RLPIE VPST EEPVGD ATGS+KRSKN+RKARKKL +ENQ
Subjt:  GHVGMTVNEDIYVENASLTDEVVSGAISEIPPTTSHFQPEF---KPEASPLSVRLPIEYVPSTLEEPVGDHATGSRKRSKNRRKARKKLHVENQ

A0A6J1J4E3 double-stranded RNA-binding protein 4-like isoform X13.5e-11075.51Show/hide
Query:  IYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNL
        +YK+ LHEY Q+SRIPLPVYQT  EGS G+PKYRSTV+VDEVHYVSPNTFRNRR AE DAARIALEYISK+ KDDGF+LL EDLM CKSILSEYTVKM+L
Subjt:  IYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNL

Query:  KRPLYTTNHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQKVKDSFPSQIQSKPMSEKSEQ
        KRP+YTT  H+GSVPIFQSTLVFDGVVYTG++SRSKKEAEQLAARAAILSL  DAGNP+SQKTL +IIASKVRLHA +QKVKDS PSQIQ K M E + +
Subjt:  KRPLYTTNHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQKVKDSFPSQIQSKPMSEKSEQ

Query:  GHVGMTVNEDIYVENASLTDEVVSGAISEIPPTTSHFQPE---FKPEASPLSVRLPIEYVPSTLEEPVGDHATGSRKRSKNRRKARKKLHVENQ
         HV  TVNED  V  A L + V  GAISEI PT SH  PE    KP AS  S RLPIE VPST EEPVGD ATG++KRSKN+RKARKKL +ENQ
Subjt:  GHVGMTVNEDIYVENASLTDEVVSGAISEIPPTTSHFQPE---FKPEASPLSVRLPIEYVPSTLEEPVGDHATGSRKRSKNRRKARKKLHVENQ

A0A6J1J9P9 double-stranded RNA-binding protein 4-like isoform X33.5e-11075.51Show/hide
Query:  IYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNL
        +YK+ LHEY Q+SRIPLPVYQT  EGS G+PKYRSTV+VDEVHYVSPNTFRNRR AE DAARIALEYISK+ KDDGF+LL EDLM CKSILSEYTVKM+L
Subjt:  IYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNL

Query:  KRPLYTTNHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQKVKDSFPSQIQSKPMSEKSEQ
        KRP+YTT  H+GSVPIFQSTLVFDGVVYTG++SRSKKEAEQLAARAAILSL  DAGNP+SQKTL +IIASKVRLHA +QKVKDS PSQIQ K M E + +
Subjt:  KRPLYTTNHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQKVKDSFPSQIQSKPMSEKSEQ

Query:  GHVGMTVNEDIYVENASLTDEVVSGAISEIPPTTSHFQPE---FKPEASPLSVRLPIEYVPSTLEEPVGDHATGSRKRSKNRRKARKKLHVENQ
         HV  TVNED  V  A L + V  GAISEI PT SH  PE    KP AS  S RLPIE VPST EEPVGD ATG++KRSKN+RKARKKL +ENQ
Subjt:  GHVGMTVNEDIYVENASLTDEVVSGAISEIPPTTSHFQPE---FKPEASPLSVRLPIEYVPSTLEEPVGDHATGSRKRSKNRRKARKKLHVENQ

SwissProt top hitse value%identityAlignment
O04492 Double-stranded RNA-binding protein 15.0e-2130.74Show/hide
Query:  IYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQ-EDLMFCKSILSEYTVKMN
        ++KS+L EYAQ+ ++P PVY+ V EG      ++STV++D V Y S   F NR+ AE  AA +AL  ++K ++    +     +   CK++L EY  KMN
Subjt:  IYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQ-EDLMFCKSILSEYTVKMN

Query:  LKRPLYTTNHHD--GSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGN--PESQKTLTKIIASKVRLHATLQKVKDSFPSQIQSKPMS
           PLY     +  G V  F  T+   G+ YTG  +R+KK+AE  A R A+L++  D  N        LT +   K  + A +   +     + +     
Subjt:  LKRPLYTTNHHD--GSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGN--PESQKTLTKIIASKVRLHATLQKVKDSFPSQIQSKPMS

Query:  EKSEQGHVGMTVNEDIYVENASLTDEVVSGAISEIPPTTSHFQP
        +K+++G   +  N +  +     TD   +   SE   TT + +P
Subjt:  EKSEQGHVGMTVNEDIYVENASLTDEVVSGAISEIPPTTSHFQP

Q0DJA3 Double-stranded RNA-binding protein 34.3e-2031.77Show/hide
Query:  IYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNL
        ++KS+L EYAQ++ +  P Y T  EG    P ++STV+++   Y S   F NR+ AE  AA +AL  I K    +  +   ++   CK++L EY  KMN 
Subjt:  IYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNL

Query:  KRPLYTTNHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQKVKDSFPSQIQSK
          P Y        +  F  T+   G+ Y G  +R+KK+AE  AAR A+L++ G +    +  T   ++  K R+   ++K     P  +++K
Subjt:  KRPLYTTNHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQKVKDSFPSQIQSK

Q0IQN6 Double-stranded RNA-binding protein 81.2e-1931.77Show/hide
Query:  IYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNL
        ++KS+L EYAQ++ +  P Y T  EG    P ++STV+++   Y S   F NR+ AE  AA +AL  I K    +  +   ++   CK++L EY  KMN 
Subjt:  IYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNL

Query:  KRPLYTTNHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQKVKDSFPSQIQSK
          P Y        +  F  T+   G+ Y G  +R+KK+AE  AAR A+L++ G +    +  T   ++  K R+   ++K     P  ++ K
Subjt:  KRPLYTTNHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQKVKDSFPSQIQSK

Q0IV63 Double-stranded RNA-binding protein 75.6e-2028.05Show/hide
Query:  IYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNL
        ++KS+L EYAQ++ +  P Y T  EG    P ++STV+++   Y S   F NR+ AE  AA +AL  I K    +  +   ++   CK++L EY  KMN 
Subjt:  IYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNL

Query:  KRPLYTTNHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQKVKDSFPSQIQSK--------
          P Y        +  F  T+   G+ Y G  +R+KK+AE  AAR A+L++ G +    +  T   ++  K R+   ++K+    P  ++ K        
Subjt:  KRPLYTTNHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQKVKDSFPSQIQSK--------

Query:  -----------PMSEKSEQGHVGMTVNEDIYVENASLTDEVVSGAI
                    + EK E    G   + D+ ++   +T E   G +
Subjt:  -----------PMSEKSEQGHVGMTVNEDIYVENASLTDEVVSGAI

Q6YW64 Double-stranded RNA-binding protein 48.8e-2632.02Show/hide
Query:  YKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTK-----DDGFLLLQEDLMFCKSILSEYTV
        YKS+L EY Q++   LP+Y T  +G     K++STV+VD   + S    R  + AE DAA++A + + +R +      D F L+ +D++F KSIL EYT 
Subjt:  YKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTK-----DDGFLLLQEDLMFCKSILSEYTV

Query:  KMNLKRPLYTTNHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQKVKDSFPSQIQSKPMSE
        K    +P Y+    +GSV  + S++ F G  YTG  +R+KK+AEQ AARAA+ SL+       +  ++ KI+ SK +L   +      +   I S P ++
Subjt:  KMNLKRPLYTTNHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQKVKDSFPSQIQSKPMSE

Query:  KSEQGHVGMTVNEDIYVENASLTDEVVSGAISEIPPTTSHFQPEFKPEASPLS
        K     +  T      + +  +  +++S   +   P  +  +P+ +P A P S
Subjt:  KSEQGHVGMTVNEDIYVENASLTDEVVSGAISEIPPTTSHFQPEFKPEASPLS

Arabidopsis top hitse value%identityAlignment
AT1G09700.1 dsRNA-binding domain-like superfamily protein3.6e-2230.74Show/hide
Query:  IYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQ-EDLMFCKSILSEYTVKMN
        ++KS+L EYAQ+ ++P PVY+ V EG      ++STV++D V Y S   F NR+ AE  AA +AL  ++K ++    +     +   CK++L EY  KMN
Subjt:  IYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQ-EDLMFCKSILSEYTVKMN

Query:  LKRPLYTTNHHD--GSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGN--PESQKTLTKIIASKVRLHATLQKVKDSFPSQIQSKPMS
           PLY     +  G V  F  T+   G+ YTG  +R+KK+AE  A R A+L++  D  N        LT +   K  + A +   +     + +     
Subjt:  LKRPLYTTNHHD--GSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGN--PESQKTLTKIIASKVRLHATLQKVKDSFPSQIQSKPMS

Query:  EKSEQGHVGMTVNEDIYVENASLTDEVVSGAISEIPPTTSHFQP
        +K+++G   +  N +  +     TD   +   SE   TT + +P
Subjt:  EKSEQGHVGMTVNEDIYVENASLTDEVVSGAISEIPPTTSHFQP

AT2G28380.1 dsRNA-binding protein 21.7e-1629.95Show/hide
Query:  IYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFL--LLQEDLMFCKSILSEYTVKM
        +YK+QL E AQRS   LP Y  + EG    P++++TV  +   + SP      R AEH AA +AL  +S R         +L E  ++ K++L E   ++
Subjt:  IYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFL--LLQEDLMFCKSILSEYTVKM

Query:  NLKRPLYTTNHHD-GSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSL-------IGDAGNPESQKTLTKIIASKVRLHATLQKVKDSFPSQIQ
            P YTT     G  P+F  T+   G+ +TG+ +++KK+AE+ AA AA  SL             PE+   L ++I ++  ++  +++   +  S   
Subjt:  NLKRPLYTTNHHD-GSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSL-------IGDAGNPESQKTLTKIIASKVRLHATLQKVKDSFPSQIQ

Query:  SKPMSEK
          P ++K
Subjt:  SKPMSEK

AT3G62800.1 double-stranded-RNA-binding protein 47.2e-1530.84Show/hide
Query:  IYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNL
        +YK QL  YA +  + LPVY    EG    P++R  V      + S   F   + AEH AA+IA+  ++ ++ +        D+ + K++L E   K + 
Subjt:  IYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNL

Query:  KRPLYTTNHHDGS-VPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQKVKDSFPSQIQSKPMSE---
          P Y T     S  P F ST+ F G V++G  +++KK AE  AA+ A +S+     N     TL        R       VK S P +I S+P S+   
Subjt:  KRPLYTTNHHDGS-VPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQKVKDSFPSQIQSKPMSE---

Query:  KSEQGHVGMTVNED
          +    G+ VNED
Subjt:  KSEQGHVGMTVNED

AT3G62800.2 double-stranded-RNA-binding protein 47.2e-1530.84Show/hide
Query:  IYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNL
        +YK QL  YA +  + LPVY    EG    P++R  V      + S   F   + AEH AA+IA+  ++ ++ +        D+ + K++L E   K + 
Subjt:  IYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNL

Query:  KRPLYTTNHHDGS-VPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQKVKDSFPSQIQSKPMSE---
          P Y T     S  P F ST+ F G V++G  +++KK AE  AA+ A +S+     N     TL        R       VK S P +I S+P S+   
Subjt:  KRPLYTTNHHDGS-VPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQKVKDSFPSQIQSKPMSE---

Query:  KSEQGHVGMTVNED
          +    G+ VNED
Subjt:  KSEQGHVGMTVNED

AT3G62800.3 double-stranded-RNA-binding protein 47.2e-1530.84Show/hide
Query:  IYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNL
        +YK QL  YA +  + LPVY    EG    P++R  V      + S   F   + AEH AA+IA+  ++ ++ +        D+ + K++L E   K + 
Subjt:  IYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNL

Query:  KRPLYTTNHHDGS-VPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQKVKDSFPSQIQSKPMSE---
          P Y T     S  P F ST+ F G V++G  +++KK AE  AA+ A +S+     N     TL        R       VK S P +I S+P S+   
Subjt:  KRPLYTTNHHDGS-VPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQKVKDSFPSQIQSKPMSE---

Query:  KSEQGHVGMTVNED
          +    G+ VNED
Subjt:  KSEQGHVGMTVNED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATATACAAGAGTCAATTGCATGAGTACGCGCAAAGATCGAGGATCCCATTACCAGTTTATCAAACAGTTATTGAAGGATCTATAGGTTTACCAAAATATAGGTCTACTGT
GTTAGTTGATGAGGTACATTACGTGTCTCCAAATACGTTTCGTAATCGAAGGGGAGCTGAACATGATGCTGCTAGAATTGCCCTTGAGTACATATCAAAAAGAACAAAGG
ACGATGGCTTTCTTCTTCTTCAGGAGGATTTGATGTTTTGTAAGTCCATTTTATCTGAATATACGGTCAAAATGAACTTGAAAAGACCTCTTTACACAACAAATCATCAC
GACGGCTCAGTTCCAATTTTCCAATCCACCTTGGTTTTTGATGGTGTGGTTTATACCGGCAATCTTAGTAGGAGCAAAAAAGAGGCCGAGCAATTGGCAGCACGTGCTGC
TATACTATCACTTATTGGTGATGCAGGAAATCCCGAATCACAAAAAACCCTTACTAAAATTATTGCTTCTAAAGTCAGACTCCATGCAACGTTGCAAAAGGTTAAAGATT
CATTTCCATCACAAATTCAATCCAAACCCATGTCTGAAAAGTCAGAGCAAGGACATGTTGGAATGACAGTTAATGAAGATATATATGTCGAAAATGCTAGTTTGACTGAT
GAAGTTGTATCTGGTGCAATTTCAGAGATTCCTCCCACAACATCTCATTTTCAACCTGAATTTAAACCAGAAGCATCACCCCTTTCAGTGAGACTCCCTATAGAATATGT
GCCTTCAACTTTAGAGGAACCTGTAGGTGATCATGCGACTGGGTCTAGAAAGCGGTCCAAGAACAGGAGAAAGGCGCGTAAGAAATTGCATGTTGAGAACCAG
mRNA sequenceShow/hide mRNA sequence
ATATACAAGAGTCAATTGCATGAGTACGCGCAAAGATCGAGGATCCCATTACCAGTTTATCAAACAGTTATTGAAGGATCTATAGGTTTACCAAAATATAGGTCTACTGT
GTTAGTTGATGAGGTACATTACGTGTCTCCAAATACGTTTCGTAATCGAAGGGGAGCTGAACATGATGCTGCTAGAATTGCCCTTGAGTACATATCAAAAAGAACAAAGG
ACGATGGCTTTCTTCTTCTTCAGGAGGATTTGATGTTTTGTAAGTCCATTTTATCTGAATATACGGTCAAAATGAACTTGAAAAGACCTCTTTACACAACAAATCATCAC
GACGGCTCAGTTCCAATTTTCCAATCCACCTTGGTTTTTGATGGTGTGGTTTATACCGGCAATCTTAGTAGGAGCAAAAAAGAGGCCGAGCAATTGGCAGCACGTGCTGC
TATACTATCACTTATTGGTGATGCAGGAAATCCCGAATCACAAAAAACCCTTACTAAAATTATTGCTTCTAAAGTCAGACTCCATGCAACGTTGCAAAAGGTTAAAGATT
CATTTCCATCACAAATTCAATCCAAACCCATGTCTGAAAAGTCAGAGCAAGGACATGTTGGAATGACAGTTAATGAAGATATATATGTCGAAAATGCTAGTTTGACTGAT
GAAGTTGTATCTGGTGCAATTTCAGAGATTCCTCCCACAACATCTCATTTTCAACCTGAATTTAAACCAGAAGCATCACCCCTTTCAGTGAGACTCCCTATAGAATATGT
GCCTTCAACTTTAGAGGAACCTGTAGGTGATCATGCGACTGGGTCTAGAAAGCGGTCCAAGAACAGGAGAAAGGCGCGTAAGAAATTGCATGTTGAGAACCAG
Protein sequenceShow/hide protein sequence
IYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNLKRPLYTTNHH
DGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQKVKDSFPSQIQSKPMSEKSEQGHVGMTVNEDIYVENASLTD
EVVSGAISEIPPTTSHFQPEFKPEASPLSVRLPIEYVPSTLEEPVGDHATGSRKRSKNRRKARKKLHVENQ