; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS019144 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019144
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionEF hand calcium-binding protein family
Genome locationscaffold20:1889630..1890034
RNA-Seq ExpressionMS019144
SyntenyMS019144
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143269.1 probable calcium-binding protein CML23 [Momordica charantia]9.9e-70100Show/hide
Query:  EVTKVFNKFDKNGDGKISVNELGDALGELGGKVSSDEVRRIMAEIDKDGDGFIDLDEFAEFHQDVSATGGGNKDLQDAFDLYDIDKNGLISAKELHSVLK
        EVTKVFNKFDKNGDGKISVNELGDALGELGGKVSSDEVRRIMAEIDKDGDGFIDLDEFAEFHQDVSATGGGNKDLQDAFDLYDIDKNGLISAKELHSVLK
Subjt:  EVTKVFNKFDKNGDGKISVNELGDALGELGGKVSSDEVRRIMAEIDKDGDGFIDLDEFAEFHQDVSATGGGNKDLQDAFDLYDIDKNGLISAKELHSVLK

Query:  RLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMM
        RLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMM
Subjt:  RLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMM

XP_022948508.1 probable calcium-binding protein CML23 [Cucurbita moschata]2.9e-6187.41Show/hide
Query:  EVTKVFNKFDKNGDGKISVNELGDALGELGGKVSSDEVRRIMAEIDKDGDGFIDLDEFAEFHQDVSATGGGNKDLQDAFDLYDIDKNGLISAKELHSVLK
        EV  VF KFDKNGDGKIS+ EL  ALGELGGK+S DE+RRIM+EIDKDG+GFIDLDEFAEFHQ+ S+TGGG+KDLQDAFDLYD+DKNGLISAKELHSVLK
Subjt:  EVTKVFNKFDKNGDGKISVNELGDALGELGGKVSSDEVRRIMAEIDKDGDGFIDLDEFAEFHQDVSATGGGNKDLQDAFDLYDIDKNGLISAKELHSVLK

Query:  RLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMM
        RLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMM
Subjt:  RLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMM

XP_022998716.1 probable calcium-binding protein CML23 [Cucurbita maxima]6.5e-6186.67Show/hide
Query:  EVTKVFNKFDKNGDGKISVNELGDALGELGGKVSSDEVRRIMAEIDKDGDGFIDLDEFAEFHQDVSATGGGNKDLQDAFDLYDIDKNGLISAKELHSVLK
        EV  VF KFDKNGDGKIS+ EL  ALGELGGK+S DE+RRIM+EIDKDG+GFIDLDEFAEFHQ+ S+TGGG+KDLQDAFDL+D+DKNGLISAKELHSVLK
Subjt:  EVTKVFNKFDKNGDGKISVNELGDALGELGGKVSSDEVRRIMAEIDKDGDGFIDLDEFAEFHQDVSATGGGNKDLQDAFDLYDIDKNGLISAKELHSVLK

Query:  RLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMM
        RLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMM
Subjt:  RLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMM

XP_023526443.1 calcium-binding protein CML24-like [Cucurbita pepo subsp. pepo]1.9e-6086.67Show/hide
Query:  EVTKVFNKFDKNGDGKISVNELGDALGELGGKVSSDEVRRIMAEIDKDGDGFIDLDEFAEFHQDVSATGGGNKDLQDAFDLYDIDKNGLISAKELHSVLK
        EV K+F KFDKNGDGKIS++ELG ALGELGGK+SSDE+RRIM EID DGDGFIDLDEF  FHQD    GGGNKDLQDAFDLYD+DKNGLISAKELH VLK
Subjt:  EVTKVFNKFDKNGDGKISVNELGDALGELGGKVSSDEVRRIMAEIDKDGDGFIDLDEFAEFHQDVSATGGGNKDLQDAFDLYDIDKNGLISAKELHSVLK

Query:  RLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMM
        RLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMM
Subjt:  RLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMM

XP_038879983.1 probable calcium-binding protein CML23 [Benincasa hispida]4.0e-6390.37Show/hide
Query:  EVTKVFNKFDKNGDGKISVNELGDALGELGGKVSSDEVRRIMAEIDKDGDGFIDLDEFAEFHQDVSATGGGNKDLQDAFDLYDIDKNGLISAKELHSVLK
        +V KVFNKFDKNGDGKISVNELG AL ELGGK+S+DE+RRIM+EIDKDGDGFIDLDEFAEFHQD S++ G NKDLQDAFDLYDIDKNGLISAKELHSVLK
Subjt:  EVTKVFNKFDKNGDGKISVNELGDALGELGGKVSSDEVRRIMAEIDKDGDGFIDLDEFAEFHQDVSATGGGNKDLQDAFDLYDIDKNGLISAKELHSVLK

Query:  RLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMM
        RLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMM
Subjt:  RLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMM

TrEMBL top hitse value%identityAlignment
A0A6J1CNU4 probable calcium-binding protein CML234.8e-70100Show/hide
Query:  EVTKVFNKFDKNGDGKISVNELGDALGELGGKVSSDEVRRIMAEIDKDGDGFIDLDEFAEFHQDVSATGGGNKDLQDAFDLYDIDKNGLISAKELHSVLK
        EVTKVFNKFDKNGDGKISVNELGDALGELGGKVSSDEVRRIMAEIDKDGDGFIDLDEFAEFHQDVSATGGGNKDLQDAFDLYDIDKNGLISAKELHSVLK
Subjt:  EVTKVFNKFDKNGDGKISVNELGDALGELGGKVSSDEVRRIMAEIDKDGDGFIDLDEFAEFHQDVSATGGGNKDLQDAFDLYDIDKNGLISAKELHSVLK

Query:  RLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMM
        RLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMM
Subjt:  RLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMM

A0A6J1F6R4 calcium-binding protein CML24-like2.0e-6085.93Show/hide
Query:  EVTKVFNKFDKNGDGKISVNELGDALGELGGKVSSDEVRRIMAEIDKDGDGFIDLDEFAEFHQDVSATGGGNKDLQDAFDLYDIDKNGLISAKELHSVLK
        EV K+F KFDKNGDGKIS++ELG ALGELGG++SSDE+RRIM EID DGDGFIDLDEF  FHQD    GGGNKDLQDAFDLYD+DKNGLISAKELH VLK
Subjt:  EVTKVFNKFDKNGDGKISVNELGDALGELGGKVSSDEVRRIMAEIDKDGDGFIDLDEFAEFHQDVSATGGGNKDLQDAFDLYDIDKNGLISAKELHSVLK

Query:  RLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMM
        RLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMM
Subjt:  RLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMM

A0A6J1G9H5 probable calcium-binding protein CML231.4e-6187.41Show/hide
Query:  EVTKVFNKFDKNGDGKISVNELGDALGELGGKVSSDEVRRIMAEIDKDGDGFIDLDEFAEFHQDVSATGGGNKDLQDAFDLYDIDKNGLISAKELHSVLK
        EV  VF KFDKNGDGKIS+ EL  ALGELGGK+S DE+RRIM+EIDKDG+GFIDLDEFAEFHQ+ S+TGGG+KDLQDAFDLYD+DKNGLISAKELHSVLK
Subjt:  EVTKVFNKFDKNGDGKISVNELGDALGELGGKVSSDEVRRIMAEIDKDGDGFIDLDEFAEFHQDVSATGGGNKDLQDAFDLYDIDKNGLISAKELHSVLK

Query:  RLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMM
        RLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMM
Subjt:  RLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMM

A0A6J1J811 calcium-binding protein CML24-like4.5e-6086.67Show/hide
Query:  EVTKVFNKFDKNGDGKISVNELGDALGELGGKVSSDEVRRIMAEIDKDGDGFIDLDEFAEFHQDVSATGGGNKDLQDAFDLYDIDKNGLISAKELHSVLK
        EV K+F KFDKNGDGKISV+ELG ALGELGGK+SSDE RRIM EID DGDGFIDLDEFA FH++    GGGNKDLQDAFDLYD+DKNGLISAKELH VLK
Subjt:  EVTKVFNKFDKNGDGKISVNELGDALGELGGKVSSDEVRRIMAEIDKDGDGFIDLDEFAEFHQDVSATGGGNKDLQDAFDLYDIDKNGLISAKELHSVLK

Query:  RLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMM
        RLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMM
Subjt:  RLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMM

A0A6J1KB05 probable calcium-binding protein CML233.1e-6186.67Show/hide
Query:  EVTKVFNKFDKNGDGKISVNELGDALGELGGKVSSDEVRRIMAEIDKDGDGFIDLDEFAEFHQDVSATGGGNKDLQDAFDLYDIDKNGLISAKELHSVLK
        EV  VF KFDKNGDGKIS+ EL  ALGELGGK+S DE+RRIM+EIDKDG+GFIDLDEFAEFHQ+ S+TGGG+KDLQDAFDL+D+DKNGLISAKELHSVLK
Subjt:  EVTKVFNKFDKNGDGKISVNELGDALGELGGKVSSDEVRRIMAEIDKDGDGFIDLDEFAEFHQDVSATGGGNKDLQDAFDLYDIDKNGLISAKELHSVLK

Query:  RLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMM
        RLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMM
Subjt:  RLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMM

SwissProt top hitse value%identityAlignment
P25070 Calcium-binding protein CML244.2e-3958.57Show/hide
Query:  EVTKVFNKFDKNGDGKISVNELGDALGELGGKVSSDEVRRIMAEIDKDGDGFIDLDEFAEFHQDVSATGGGN-----KDLQDAFDLYDIDKNGLISAKEL
        ++ KVF +FDKNGDGKISV+EL + +  L    S +E   +M + D DG+GFIDLDEF    Q +   GGGN      DL++AF+LYD+D NG ISAKEL
Subjt:  EVTKVFNKFDKNGDGKISVNELGDALGELGGKVSSDEVRRIMAEIDKDGDGFIDLDEFAEFHQDVSATGGGN-----KDLQDAFDLYDIDKNGLISAKEL

Query:  HSVLKRLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMM
        HSV+K LGEKCS++DC +MIS VD+DGDG VNF+EFKKMM
Subjt:  HSVLKRLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMM

Q0DJV6 Probable calcium-binding protein CML184.4e-3653.06Show/hide
Query:  EVTKVFNKFDKNGDGKISVNELGDALGELGGKVSSDEVRRIMAEIDKDGDGFIDLDEFAEFHQDVSATGGG------------NKDLQDAFDLYDIDKNG
        E+ +VF ++D NGDGKIS  EL   L  LG  +   EVRR+M E+D D DGF+DL EFA FH   +   GG              +L++AF +YD D NG
Subjt:  EVTKVFNKFDKNGDGKISVNELGDALGELGGKVSSDEVRRIMAEIDKDGDGFIDLDEFAEFHQDVSATGGG------------NKDLQDAFDLYDIDKNG

Query:  LISAKELHSVLKRLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMM
         ISA+ELH VL++LG+KCS+ DC RMI SVD DGDG VNF+EFKKMM
Subjt:  LISAKELHSVLKRLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMM

Q9C8Y1 Probable calcium-binding protein CML232.9e-4059.12Show/hide
Query:  EVTKVFNKFDKNGDGKISVNELGDALGELGGKVSSDEVRRIMAEIDKDGDGFIDLDEFAEFHQ--DVSATGGGNKDLQDAFDLYDIDKNGLISAKELHSV
        ++ KVF +FDKN DGKIS++EL D +G L    S +E + +M E D DG+GFIDLDEF    Q  D S+     +DL++AFDLYD+D+NG ISA ELHSV
Subjt:  EVTKVFNKFDKNGDGKISVNELGDALGELGGKVSSDEVRRIMAEIDKDGDGFIDLDEFAEFHQ--DVSATGGGNKDLQDAFDLYDIDKNGLISAKELHSV

Query:  LKRLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMM
        +K LGEKCS++DC RMI+ VD DGDG V+FEEFKKMM
Subjt:  LKRLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMM

Q9LE22 Probable calcium-binding protein CML272.6e-3656.3Show/hide
Query:  EVTKVFNKFDKNGDGKISVNELGDALGELGGKVSSDEVRRIMAEIDKDGDGFIDLDEFAEFHQDVSATGGGNKDLQDAFDLYDIDKNGLISAKELHSVLK
        E+ KVF++FD NGDGKISV ELG     +G   +  E+ R++ E+D D DG+I+LDEF+   +  S+      +++DAFDLYD DKNGLISA ELH VL 
Subjt:  EVTKVFNKFDKNGDGKISVNELGDALGELGGKVSSDEVRRIMAEIDKDGDGFIDLDEFAEFHQDVSATGGGNKDLQDAFDLYDIDKNGLISAKELHSVLK

Query:  RLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMM
        RLG  CS++DC RMI  VD DGDG+VNFEEF+KMM
Subjt:  RLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMM

Q9M7R0 Calcium-binding allergen Ole e 87.5e-3657.25Show/hide
Query:  EVTKVFNKFDKNGDGKISVNELGDALGELGGKVSSDEVRRIMAEIDKDGDGFIDLDEFAEF---HQDVSATGGGNKDLQDAFDLYDIDKNGLISAKELHS
        EV  VFN+FD NGDGKIS +EL   L  LG   S +E+ RIM EID D DGFI++ EFA F     D   + GG  +L++AF+LYD D NGLIS+ ELH 
Subjt:  EVTKVFNKFDKNGDGKISVNELGDALGELGGKVSSDEVRRIMAEIDKDGDGFIDLDEFAEF---HQDVSATGGGNKDLQDAFDLYDIDKNGLISAKELHS

Query:  VLKRLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMM
        +L RLGE+ +  DC  MI SVD DGDG+V+FEEFKKMM
Subjt:  VLKRLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMM

Arabidopsis top hitse value%identityAlignment
AT1G18210.1 Calcium-binding EF-hand family protein1.8e-3756.3Show/hide
Query:  EVTKVFNKFDKNGDGKISVNELGDALGELGGKVSSDEVRRIMAEIDKDGDGFIDLDEFAEFHQDVSATGGGNKDLQDAFDLYDIDKNGLISAKELHSVLK
        E+ KVF++FD NGDGKISV ELG     +G   +  E+ R++ E+D D DG+I+LDEF+   +  S+      +++DAFDLYD DKNGLISA ELH VL 
Subjt:  EVTKVFNKFDKNGDGKISVNELGDALGELGGKVSSDEVRRIMAEIDKDGDGFIDLDEFAEFHQDVSATGGGNKDLQDAFDLYDIDKNGLISAKELHSVLK

Query:  RLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMM
        RLG  CS++DC RMI  VD DGDG+VNFEEF+KMM
Subjt:  RLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMM

AT1G18210.2 Calcium-binding EF-hand family protein1.8e-3756.3Show/hide
Query:  EVTKVFNKFDKNGDGKISVNELGDALGELGGKVSSDEVRRIMAEIDKDGDGFIDLDEFAEFHQDVSATGGGNKDLQDAFDLYDIDKNGLISAKELHSVLK
        E+ KVF++FD NGDGKISV ELG     +G   +  E+ R++ E+D D DG+I+LDEF+   +  S+      +++DAFDLYD DKNGLISA ELH VL 
Subjt:  EVTKVFNKFDKNGDGKISVNELGDALGELGGKVSSDEVRRIMAEIDKDGDGFIDLDEFAEFHQDVSATGGGNKDLQDAFDLYDIDKNGLISAKELHSVLK

Query:  RLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMM
        RLG  CS++DC RMI  VD DGDG+VNFEEF+KMM
Subjt:  RLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMM

AT1G66400.1 calmodulin like 232.1e-4159.12Show/hide
Query:  EVTKVFNKFDKNGDGKISVNELGDALGELGGKVSSDEVRRIMAEIDKDGDGFIDLDEFAEFHQ--DVSATGGGNKDLQDAFDLYDIDKNGLISAKELHSV
        ++ KVF +FDKN DGKIS++EL D +G L    S +E + +M E D DG+GFIDLDEF    Q  D S+     +DL++AFDLYD+D+NG ISA ELHSV
Subjt:  EVTKVFNKFDKNGDGKISVNELGDALGELGGKVSSDEVRRIMAEIDKDGDGFIDLDEFAEFHQ--DVSATGGGNKDLQDAFDLYDIDKNGLISAKELHSV

Query:  LKRLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMM
        +K LGEKCS++DC RMI+ VD DGDG V+FEEFKKMM
Subjt:  LKRLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMM

AT1G73630.1 EF hand calcium-binding protein family2.6e-3654.81Show/hide
Query:  EVTKVFNKFDKNGDGKISVNELGDALGELGGKVSSDEVRRIMAEIDKDGDGFIDLDEFAEFHQDVSATGGGNKDLQDAFDLYDIDKNGLISAKELHSVLK
        E+ KVF+KFD NGDGKISV+ELG+    +G   + +E+ R++ EID D DGFI+ +EFA   +  S+      ++++AFDLYD +KNGLIS+ E+H VL 
Subjt:  EVTKVFNKFDKNGDGKISVNELGDALGELGGKVSSDEVRRIMAEIDKDGDGFIDLDEFAEFHQDVSATGGGNKDLQDAFDLYDIDKNGLISAKELHSVLK

Query:  RLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMM
        RLG  CS++DC RMI  VD DGDG+VNFEEF+KMM
Subjt:  RLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMM

AT5G37770.1 EF hand calcium-binding protein family3.0e-4058.57Show/hide
Query:  EVTKVFNKFDKNGDGKISVNELGDALGELGGKVSSDEVRRIMAEIDKDGDGFIDLDEFAEFHQDVSATGGGN-----KDLQDAFDLYDIDKNGLISAKEL
        ++ KVF +FDKNGDGKISV+EL + +  L    S +E   +M + D DG+GFIDLDEF    Q +   GGGN      DL++AF+LYD+D NG ISAKEL
Subjt:  EVTKVFNKFDKNGDGKISVNELGDALGELGGKVSSDEVRRIMAEIDKDGDGFIDLDEFAEFHQDVSATGGGN-----KDLQDAFDLYDIDKNGLISAKEL

Query:  HSVLKRLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMM
        HSV+K LGEKCS++DC +MIS VD+DGDG VNF+EFKKMM
Subjt:  HSVLKRLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAGGTCACCAAGGTGTTCAACAAGTTCGACAAGAACGGCGACGGCAAGATTTCCGTCAACGAGCTCGGCGACGCGCTCGGCGAACTCGGCGGCAAGGTCTCCTCCGACGA
GGTCCGCCGCATTATGGCGGAGATCGATAAGGACGGCGACGGATTCATCGATCTCGACGAGTTCGCCGAGTTTCATCAAGACGTGTCGGCGACCGGCGGAGGAAACAAAG
ATCTGCAGGACGCTTTCGATCTGTACGACATCGACAAGAACGGCCTAATCTCGGCGAAGGAGTTGCATTCCGTGCTGAAGCGGCTCGGCGAGAAATGTAGCCTGAAGGAT
TGCTGCCGGATGATCAGTTCCGTCGATGTCGACGGCGACGGCCATGTAAATTTCGAGGAGTTCAAGAAGATGATG
mRNA sequenceShow/hide mRNA sequence
GAGGTCACCAAGGTGTTCAACAAGTTCGACAAGAACGGCGACGGCAAGATTTCCGTCAACGAGCTCGGCGACGCGCTCGGCGAACTCGGCGGCAAGGTCTCCTCCGACGA
GGTCCGCCGCATTATGGCGGAGATCGATAAGGACGGCGACGGATTCATCGATCTCGACGAGTTCGCCGAGTTTCATCAAGACGTGTCGGCGACCGGCGGAGGAAACAAAG
ATCTGCAGGACGCTTTCGATCTGTACGACATCGACAAGAACGGCCTAATCTCGGCGAAGGAGTTGCATTCCGTGCTGAAGCGGCTCGGCGAGAAATGTAGCCTGAAGGAT
TGCTGCCGGATGATCAGTTCCGTCGATGTCGACGGCGACGGCCATGTAAATTTCGAGGAGTTCAAGAAGATGATG
Protein sequenceShow/hide protein sequence
EVTKVFNKFDKNGDGKISVNELGDALGELGGKVSSDEVRRIMAEIDKDGDGFIDLDEFAEFHQDVSATGGGNKDLQDAFDLYDIDKNGLISAKELHSVLKRLGEKCSLKD
CCRMISSVDVDGDGHVNFEEFKKMM