CuGenDBv2

Gene ID	MS019152
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Unknown protein
Genome location	scaffold20:1973215..1973790
RNA-Seq Expression	MS019152
Synteny	MS019152
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6607017.1 hypothetical protein SDJN03_00359, partial [Cucurbita argyrosperma subsp. sororia]

7.8e-68

75.39

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Query:  LIPLLLLFLLPILLSISADARPCKSLFVSFSLHRHRTLDSRDPFSEMAIIVDITELKS--SSASSSEALFHSVAQDILQYDLARPRA-VATQPHPLQDSP
        +I L LLFLL + L I +DARPCKSLFVSFS+HRH TLDSRDPFSEMAIIVDITELKS  SS+SSS++LF     D+L+ DL R RA VA+QPH LQ+ P
Subjt:  LIPLLLLFLLPILLSISADARPCKSLFVSFSLHRHRTLDSRDPFSEMAIIVDITELKS--SSASSSEALFHSVAQDILQYDLARPRA-VATQPHPLQDSP

Query:  LGFSYDFSSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLCASRFGYRSSVYEDFGDEDDYSDDNKENIKKMGYIKVPDEVAPVKPV
        LG SYDFSSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLC+S+F +RSSVY+D  +E D+SDDNKENIKKMGY+K+P++VAPVK V
Subjt:  LGFSYDFSSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLCASRFGYRSSVYEDFGDEDDYSDDNKENIKKMGYIKVPDEVAPVKPV

XP_022143446.1 uncharacterized protein LOC111013320 [Momordica charantia]

1.4e-96

99.48

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Query:  MASKLIPLLLLFLLPILLSISADARPCKSLFVSFSLHRHRTLDSRDPFSEMAIIVDITELKSSSASSSEALFHSVAQDILQYDLARPRAVATQPHPLQDS
        MASKLIPLLLLFLLPILLSISADARPCKSLFVSFSLHRHRTLDSRDPFSEMAIIVDITELKSSSASSSEALFHSVAQDILQYDLARPRAVATQPHPLQDS
Subjt:  MASKLIPLLLLFLLPILLSISADARPCKSLFVSFSLHRHRTLDSRDPFSEMAIIVDITELKSSSASSSEALFHSVAQDILQYDLARPRAVATQPHPLQDS

Query:  PLGFSYDFSSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLCASRFGYRSSVYEDFGDEDDYSDDNKENIKKMGYIKVPDEVAPVKPV
        PLGFSYDFSSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLCASRFGYRSSVY DFGDEDDYSDDNKENIKKMGYIKVPDEVAPVKPV
Subjt:  PLGFSYDFSSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLCASRFGYRSSVYEDFGDEDDYSDDNKENIKKMGYIKVPDEVAPVKPV

XP_022949496.1 uncharacterized protein LOC111452824 [Cucurbita moschata]

6.6e-67

74.87

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Query:  LIPLLLLFLLPILLSISADARPCKSLFVSFSLHRHRTLDSRDPFSEMAIIVDITELKS--SSASSSEALFHSVAQDILQYDLARPRA-VATQPHPLQDSP
        +I L LLFLL + L I +DARPCKSLFVSFS+HRH TLDSRDPFSEMAIIVDITELKS  SS+SSS++LF     D+L+ DL R RA VA+QPH LQ+ P
Subjt:  LIPLLLLFLLPILLSISADARPCKSLFVSFSLHRHRTLDSRDPFSEMAIIVDITELKS--SSASSSEALFHSVAQDILQYDLARPRA-VATQPHPLQDSP

Query:  LGFSYDFSSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLCASRFGYRSSVYEDFGDEDDYSDDNKENIKKMGYIKVPDEVAPVKPV
        LG SYDFSSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLC+S+F +RSSVY+D  +E D+SDDNKENIKKMGY+K+P++VA VK V
Subjt:  LGFSYDFSSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLCASRFGYRSSVYEDFGDEDDYSDDNKENIKKMGYIKVPDEVAPVKPV

XP_022998635.1 uncharacterized protein LOC111493222 [Cucurbita maxima]

8.6e-67

74.35

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Query:  LIPLLLLFLLPILLSISADARPCKSLFVSFSLHRHRTLDSRDPFSEMAIIVDITELKS--SSASSSEALFHSVAQDILQYDLARPRA-VATQPHPLQDSP
        +I L LLFLL + L I +DARPCKSLFVSFS+HRH TLDSRDPFSEMAIIVDITELKS  +S+SSS++LF     D+L+ DL R RA VA+QPH LQ+ P
Subjt:  LIPLLLLFLLPILLSISADARPCKSLFVSFSLHRHRTLDSRDPFSEMAIIVDITELKS--SSASSSEALFHSVAQDILQYDLARPRA-VATQPHPLQDSP

Query:  LGFSYDFSSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLCASRFGYRSSVYEDFGDEDDYSDDNKENIKKMGYIKVPDEVAPVKPV
        LG SYDFSSLRDRTKDILSVVVALLFGVGCGAL AATMYLAYSLC+S+F +RSSVY+D  +E D+SDDNKENIKKMGY+K+P++VAPVK V
Subjt:  LGFSYDFSSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLCASRFGYRSSVYEDFGDEDDYSDDNKENIKKMGYIKVPDEVAPVKPV

XP_023525953.1 uncharacterized protein LOC111789416 [Cucurbita pepo subsp. pepo]

5.0e-67

74.35

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Query:  LIPLLLLFLLPILLSISADARPCKSLFVSFSLHRHRTLDSRDPFSEMAIIVDITELKS--SSASSSEALFHSVAQDILQYDLARPRA-VATQPHPLQDSP
        +I L LLFLL + L I +DARPCKSLFVSFS+HRH TLDSRDPFSEMAIIVDITELKS  SS+SSS++LF     ++L+ DL R RA VA++PH LQ+ P
Subjt:  LIPLLLLFLLPILLSISADARPCKSLFVSFSLHRHRTLDSRDPFSEMAIIVDITELKS--SSASSSEALFHSVAQDILQYDLARPRA-VATQPHPLQDSP

Query:  LGFSYDFSSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLCASRFGYRSSVYEDFGDEDDYSDDNKENIKKMGYIKVPDEVAPVKPV
        LG SYDFSSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLC+S+F +RSSVY+D  +E D+SDDNKENIKKMGY+K+P++VAPVK V
Subjt:  LGFSYDFSSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLCASRFGYRSSVYEDFGDEDDYSDDNKENIKKMGYIKVPDEVAPVKPV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L741 Uncharacterized protein

4.9e-60

73.16

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Query:  PLLLLFLLPILLSISADARPCKSLFVSFSLHRHRTLDSRDPFSEMAIIVDITELKSSSASSS-EALFHSVAQ--DILQYDLARPRAVATQPHPLQDSPLG
        PL LLFL  I  SI + ARPCKSLF+SFSLHRHRTLDS  PFS+MAIIVDITE KSSS SSS + LF SVA   DIL++DL RP        P+  S   
Subjt:  PLLLLFLLPILLSISADARPCKSLFVSFSLHRHRTLDSRDPFSEMAIIVDITELKSSSASSS-EALFHSVAQ--DILQYDLARPRAVATQPHPLQDSPLG

Query:  FSYDFSSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLCASRFGYRSSVYEDFG-DEDDYSDDNKENIKKMGYIKVPDEVAPVKPV
        F YDF+SLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSL A +FG+RSSVY+DFG DEDD SDDNKENIKKMGYI +PD+VAPVK V
Subjt:  FSYDFSSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLCASRFGYRSSVYEDFG-DEDDYSDDNKENIKKMGYIKVPDEVAPVKPV

A0A1S3C467 uncharacterized protein LOC103496817 isoform X1

4.9e-60

73.3

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Query:  PLLLLFLLPILLSISADARPCKSLFVSFSLHRHRTLDSRDPFSEMAIIVDITELKSSS-ASSSEALFHSVAQ--DILQYDLARPRAV-ATQPHPLQDSPL
        PL LLFL  I  SI + ARPCKSLF+SFSLHRHRTLDS  PFS+MAIIVDITE KSSS +SSS+ LF SVA   DIL++DL RP  V AT  H       
Subjt:  PLLLLFLLPILLSISADARPCKSLFVSFSLHRHRTLDSRDPFSEMAIIVDITELKSSS-ASSSEALFHSVAQ--DILQYDLARPRAV-ATQPHPLQDSPL

Query:  GFSYDFSSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLCASRFGYRSSVYEDFG-DEDDYSDDNKENIKKMGYIKVPDEVAPVKPV
         F YDF+SLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSL A +FG+RSSVY+DFG D+DD SDDNKENIKKMGYI +PD+VAPVK V
Subjt:  GFSYDFSSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLCASRFGYRSSVYEDFG-DEDDYSDDNKENIKKMGYIKVPDEVAPVKPV

A0A6J1CQ98 uncharacterized protein LOC111013320

6.6e-97

99.48

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Query:  MASKLIPLLLLFLLPILLSISADARPCKSLFVSFSLHRHRTLDSRDPFSEMAIIVDITELKSSSASSSEALFHSVAQDILQYDLARPRAVATQPHPLQDS
        MASKLIPLLLLFLLPILLSISADARPCKSLFVSFSLHRHRTLDSRDPFSEMAIIVDITELKSSSASSSEALFHSVAQDILQYDLARPRAVATQPHPLQDS
Subjt:  MASKLIPLLLLFLLPILLSISADARPCKSLFVSFSLHRHRTLDSRDPFSEMAIIVDITELKSSSASSSEALFHSVAQDILQYDLARPRAVATQPHPLQDS

Query:  PLGFSYDFSSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLCASRFGYRSSVYEDFGDEDDYSDDNKENIKKMGYIKVPDEVAPVKPV
        PLGFSYDFSSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLCASRFGYRSSVY DFGDEDDYSDDNKENIKKMGYIKVPDEVAPVKPV
Subjt:  PLGFSYDFSSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLCASRFGYRSSVYEDFGDEDDYSDDNKENIKKMGYIKVPDEVAPVKPV

A0A6J1GC62 uncharacterized protein LOC111452824

3.2e-67

74.87

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Query:  LIPLLLLFLLPILLSISADARPCKSLFVSFSLHRHRTLDSRDPFSEMAIIVDITELKS--SSASSSEALFHSVAQDILQYDLARPRA-VATQPHPLQDSP
        +I L LLFLL + L I +DARPCKSLFVSFS+HRH TLDSRDPFSEMAIIVDITELKS  SS+SSS++LF     D+L+ DL R RA VA+QPH LQ+ P
Subjt:  LIPLLLLFLLPILLSISADARPCKSLFVSFSLHRHRTLDSRDPFSEMAIIVDITELKS--SSASSSEALFHSVAQDILQYDLARPRA-VATQPHPLQDSP

Query:  LGFSYDFSSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLCASRFGYRSSVYEDFGDEDDYSDDNKENIKKMGYIKVPDEVAPVKPV
        LG SYDFSSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLC+S+F +RSSVY+D  +E D+SDDNKENIKKMGY+K+P++VA VK V
Subjt:  LGFSYDFSSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLCASRFGYRSSVYEDFGDEDDYSDDNKENIKKMGYIKVPDEVAPVKPV

A0A6J1KD14 uncharacterized protein LOC111493222

4.1e-67

74.35

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Query:  LIPLLLLFLLPILLSISADARPCKSLFVSFSLHRHRTLDSRDPFSEMAIIVDITELKS--SSASSSEALFHSVAQDILQYDLARPRA-VATQPHPLQDSP
        +I L LLFLL + L I +DARPCKSLFVSFS+HRH TLDSRDPFSEMAIIVDITELKS  +S+SSS++LF     D+L+ DL R RA VA+QPH LQ+ P
Subjt:  LIPLLLLFLLPILLSISADARPCKSLFVSFSLHRHRTLDSRDPFSEMAIIVDITELKS--SSASSSEALFHSVAQDILQYDLARPRA-VATQPHPLQDSP

Query:  LGFSYDFSSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLCASRFGYRSSVYEDFGDEDDYSDDNKENIKKMGYIKVPDEVAPVKPV
        LG SYDFSSLRDRTKDILSVVVALLFGVGCGAL AATMYLAYSLC+S+F +RSSVY+D  +E D+SDDNKENIKKMGY+K+P++VAPVK V
Subjt:  LGFSYDFSSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLCASRFGYRSSVYEDFGDEDDYSDDNKENIKKMGYIKVPDEVAPVKPV

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G65720.1 unknown protein

2.3e-17

39.88

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Query:  ARPCKSLFV-SFSLHRHRTLDSRDPFSEMAIIVDITELKSSSASSSEALF-HSVAQDILQYDLARPRAVATQPHPLQDSPLGFSYDFSSLRDRTKDILSV
        ARPCK+  + S+SL    ++   +P  E     D T  +  +  +   L  H V    +     +P+  + +  PL       S + +S RDRT+DILSV
Subjt:  ARPCKSLFV-SFSLHRHRTLDSRDPFSEMAIIVDITELKSSSASSSEALF-HSVAQDILQYDLARPRAVATQPHPLQDSPLGFSYDFSSLRDRTKDILSV

Query:  VVALLFGVGCGALTAATMYLAYSLCASRFGYRSSVYEDF-GDEDDYSDDNKE--NIKKMGYIKVPDEV-APVK
        VVALLFGVGCGALTAATMYL ++L  +R  Y      DF  +EDDY +D  +  ++KK+GY+K+P    APVK
Subjt:  VVALLFGVGCGALTAATMYLAYSLCASRFGYRSSVYEDF-GDEDDYSDDNKE--NIKKMGYIKVPDEV-APVK

Sequences

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CDS sequence

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ATGGCGTCAAAATTGATTCCTCTTCTTCTCCTCTTTCTTCTCCCCATTCTCCTCTCAATCTCCGCAGATGCCCGCCCTTGCAAATCGCTCTTCGTCTCCTTCTCCCTCCA
CCGTCACCGAACCCTCGATTCCCGCGATCCCTTCTCCGAAATGGCCATAATCGTCGACATCACCGAGTTGAAATCCTCCTCCGCCTCGTCTTCCGAGGCGCTCTTCCACA
GCGTCGCCCAAGACATCCTCCAATACGATCTCGCTCGCCCGAGAGCTGTTGCGACCCAACCCCACCCTTTACAAGACTCGCCCTTGGGGTTTTCCTACGACTTCAGCTCT
CTCCGTGATCGCACCAAGGATATTCTCAGCGTAGTGGTGGCTCTGCTATTCGGCGTCGGGTGTGGCGCTCTCACCGCTGCCACTATGTATTTGGCGTATTCGTTGTGCGC
CTCCCGCTTCGGCTACCGCTCCTCTGTGTATGAGGACTTTGGTGATGAGGATGATTACAGCGATGATAACAAAGAAAACATCAAGAAGATGGGTTACATCAAGGTCCCCG
ACGAGGTTGCCCCTGTTAAGCCTGTG

mRNA sequence

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Protein sequence

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MASKLIPLLLLFLLPILLSISADARPCKSLFVSFSLHRHRTLDSRDPFSEMAIIVDITELKSSSASSSEALFHSVAQDILQYDLARPRAVATQPHPLQDSPLGFSYDFSS
LRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLCASRFGYRSSVYEDFGDEDDYSDDNKENIKKMGYIKVPDEVAPVKPV

MS019152 (gene) of Bitter gourd (TR) v1 genome