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MS019202 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019202
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionReverse transcriptase
Genome locationscaffold20:2488489..2488716
RNA-Seq ExpressionMS019202
SyntenyMS019202
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_013624458.1 PREDICTED: uncharacterized protein LOC106330555 [Brassica oleracea var. oleracea]9.4e-0942.67Show/hide
Query:  ECCAFKRILQLYECTSDQVINYDKSVVCFSPNIVKDRRCYLQSLLGVRLVDNFGPYLGLPSAFSRRRLEDWKFLK
        EC   K IL LY+  S Q +NYDKS + FS  I    +  L+ ++G+  +  FG YLGLP    RRR E +++LK
Subjt:  ECCAFKRILQLYECTSDQVINYDKSVVCFSPNIVKDRRCYLQSLLGVRLVDNFGPYLGLPSAFSRRRLEDWKFLK

XP_019162057.1 PREDICTED: uncharacterized protein LOC109158596 [Ipomoea nil]1.4e-0947.37Show/hide
Query:  ECCAFKRILQLYECTSDQVINYDKSVVCFSPNIVKDRRCYLQSLLGVRLVDNFGPYLGLPSAFSRRRLEDWKFLKD
        EC   K +L  +   S Q INYDKS++CFS N+ +  R  L S+LGV   D  G YLGLPS   RR+ E   FLK+
Subjt:  ECCAFKRILQLYECTSDQVINYDKSVVCFSPNIVKDRRCYLQSLLGVRLVDNFGPYLGLPSAFSRRRLEDWKFLKD

XP_022143493.1 uncharacterized protein LOC111013370 [Momordica charantia]1.3e-1356.16Show/hide
Query:  AFKRILQLYECTSDQVINYDKSVVCFSPNIVKDRRCYLQSLLGVRLVDNFGPYLGLPSAFSRRRLEDWKFLKD
        A K +L +Y  TSDQ IN+ KS + FSPN+   R+ +L SLL V LV++FG Y GLPS+FSRR+ +DW+FLKD
Subjt:  AFKRILQLYECTSDQVINYDKSVVCFSPNIVKDRRCYLQSLLGVRLVDNFGPYLGLPSAFSRRRLEDWKFLKD

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]1.5e-1152.78Show/hide
Query:  ECCAFKRILQLYECTSDQVINYDKSVVCFSPNIVKDRRCYLQSLLGVRLVDNFGPYLGLPSAFSRRRLEDWK
        EC A +R+L  Y   S Q IN+ KS + FSPN+  +R+ YLQ +L V+LV +FG YLGLPS F+RRR E  K
Subjt:  ECCAFKRILQLYECTSDQVINYDKSVVCFSPNIVKDRRCYLQSLLGVRLVDNFGPYLGLPSAFSRRRLEDWK

XP_030487384.1 uncharacterized protein LOC115704310 [Cannabis sativa]6.5e-1040.79Show/hide
Query:  ECCAFKRILQLYECTSDQVINYDKSVVCFSPNIVKDRRCYLQSLLGVRLVDNFGPYLGLPSAFSRRRLEDWKFLKD
        EC  FK +L+ Y   S Q++N+ KS +CF  N+    +  L +L+GV++VDN+G YLGLPS   R + + ++F+K+
Subjt:  ECCAFKRILQLYECTSDQVINYDKSVVCFSPNIVKDRRCYLQSLLGVRLVDNFGPYLGLPSAFSRRRLEDWKFLKD

TrEMBL top hitse value%identityAlignment
A0A6J1CQU9 uncharacterized protein LOC1110133706.1e-1456.16Show/hide
Query:  AFKRILQLYECTSDQVINYDKSVVCFSPNIVKDRRCYLQSLLGVRLVDNFGPYLGLPSAFSRRRLEDWKFLKD
        A K +L +Y  TSDQ IN+ KS + FSPN+   R+ +L SLL V LV++FG Y GLPS+FSRR+ +DW+FLKD
Subjt:  AFKRILQLYECTSDQVINYDKSVVCFSPNIVKDRRCYLQSLLGVRLVDNFGPYLGLPSAFSRRRLEDWKFLKD

A0A6J1DX30 uncharacterized protein LOC1110248747.5e-1252.78Show/hide
Query:  ECCAFKRILQLYECTSDQVINYDKSVVCFSPNIVKDRRCYLQSLLGVRLVDNFGPYLGLPSAFSRRRLEDWK
        EC A +R+L  Y   S Q IN+ KS + FSPN+  +R+ YLQ +L V+LV +FG YLGLPS F+RRR E  K
Subjt:  ECCAFKRILQLYECTSDQVINYDKSVVCFSPNIVKDRRCYLQSLLGVRLVDNFGPYLGLPSAFSRRRLEDWK

A0A803PWX1 Uncharacterized protein4.1e-1039.47Show/hide
Query:  ECCAFKRILQLYECTSDQVINYDKSVVCFSPNIVKDRRCYLQSLLGVRLVDNFGPYLGLPSAFSRRRLEDWKFLKD
        EC  FK +L+ Y   S Q++N+ KS +CF   +    R +L +++GV++VDN+G YLGLPS   R + + ++F+K+
Subjt:  ECCAFKRILQLYECTSDQVINYDKSVVCFSPNIVKDRRCYLQSLLGVRLVDNFGPYLGLPSAFSRRRLEDWKFLKD

A0A803Q0L5 Uncharacterized protein2.0e-0948.53Show/hide
Query:  CCAFKRILQLYECTSDQVINYDKSVVCFSPNIVKDRRCYLQSLLGVRLVDNFGPYLGLPSAFSRRRLE
        C  FK +L+LY   S Q++NY KS VCF  N+ ++ R  L   +GVR VDN G YLGLPS   R + E
Subjt:  CCAFKRILQLYECTSDQVINYDKSVVCFSPNIVKDRRCYLQSLLGVRLVDNFGPYLGLPSAFSRRRLE

A0A803Q3X2 Uncharacterized protein1.6e-0948.53Show/hide
Query:  CCAFKRILQLYECTSDQVINYDKSVVCFSPNIVKDRRCYLQSLLGVRLVDNFGPYLGLPSAFSRRRLE
        C  FK +L LY   S Q++NY KS VCF  N+ ++ R  L S +GVR V+N G YLGLPS   R + E
Subjt:  CCAFKRILQLYECTSDQVINYDKSVVCFSPNIVKDRRCYLQSLLGVRLVDNFGPYLGLPSAFSRRRLE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAATGTTGTGCTTTTAAAAGAATCCTTCAACTTTATGAATGCACTTCTGACCAAGTGATTAATTATGATAAGTCTGTAGTTTGTTTCTCTCCAAATATAGTCAAAGATAG
GAGATGTTATCTTCAATCTCTTTTAGGAGTTCGACTGGTGGATAATTTTGGTCCCTATCTTGGACTGCCATCAGCTTTCTCGAGAAGAAGATTAGAGGATTGGAAATTTT
TGAAGGAT
mRNA sequenceShow/hide mRNA sequence
GAATGTTGTGCTTTTAAAAGAATCCTTCAACTTTATGAATGCACTTCTGACCAAGTGATTAATTATGATAAGTCTGTAGTTTGTTTCTCTCCAAATATAGTCAAAGATAG
GAGATGTTATCTTCAATCTCTTTTAGGAGTTCGACTGGTGGATAATTTTGGTCCCTATCTTGGACTGCCATCAGCTTTCTCGAGAAGAAGATTAGAGGATTGGAAATTTT
TGAAGGAT
Protein sequenceShow/hide protein sequence
ECCAFKRILQLYECTSDQVINYDKSVVCFSPNIVKDRRCYLQSLLGVRLVDNFGPYLGLPSAFSRRRLEDWKFLKD