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MS019211 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019211
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein Ycf2
Genome locationscaffold554:183929..184081
RNA-Seq ExpressionMS019211
SyntenyMS019211
Gene Ontology termsGO:0009570 - chloroplast stroma (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ART64960.1 hypothetical chloroplast RF2 [Gynostemma pentaphyllum]3.9e-1176.47Show/hide
Query:  NEGGSYLYKGYFVLGTSMKKLTIILYLLSCSIGSVVKGFLSLLGPNEESHI
        NEGGSYLYK YF LGTSMKKLTI+LYLLSCS GSVV+   SL GPNE++ I
Subjt:  NEGGSYLYKGYFVLGTSMKKLTIILYLLSCSIGSVVKGFLSLLGPNEESHI
YP_009439847.1 hypothetical chloroplast RF2 [Gynostemma laxiflorum]3.9e-1176.47Show/hide
Query:  NEGGSYLYKGYFVLGTSMKKLTIILYLLSCSIGSVVKGFLSLLGPNEESHI
        NEGGSYLYK YF LGTSMKKLTI+LYLLSCS GSVV+   SL GPNE++ I
Subjt:  NEGGSYLYKGYFVLGTSMKKLTIILYLLSCSIGSVVKGFLSLLGPNEESHI
YP_009440021.1 hypothetical chloroplast RF2 [Gynostemma pentagynum]3.9e-1176.47Show/hide
Query:  NEGGSYLYKGYFVLGTSMKKLTIILYLLSCSIGSVVKGFLSLLGPNEESHI
        NEGGSYLYK YF LGTSMKKLTI+LYLLSCS GSVV+   SL GPNE++ I
Subjt:  NEGGSYLYKGYFVLGTSMKKLTIILYLLSCSIGSVVKGFLSLLGPNEESHI
YP_009440200.1 hypothetical chloroplast RF2 [Gynostemma longipes]3.9e-1176.47Show/hide
Query:  NEGGSYLYKGYFVLGTSMKKLTIILYLLSCSIGSVVKGFLSLLGPNEESHI
        NEGGSYLYK YF LGTSMKKLTI+LYLLSCS GSVV+   SL GPNE++ I
Subjt:  NEGGSYLYKGYFVLGTSMKKLTIILYLLSCSIGSVVKGFLSLLGPNEESHI
YP_009468904.1 hypothetical chloroplast RF2 [Gynostemma compressum]3.9e-1176.47Show/hide
Query:  NEGGSYLYKGYFVLGTSMKKLTIILYLLSCSIGSVVKGFLSLLGPNEESHI
        NEGGSYLYK YF LGTSMKKLTI+LYLLSCS GSVV+   SL GPNE++ I
Subjt:  NEGGSYLYKGYFVLGTSMKKLTIILYLLSCSIGSVVKGFLSLLGPNEESHI
TrEMBL top hitse value%identityAlignment
A0A191T4A7 Protein Ycf21.9e-1176.47Show/hide
Query:  NEGGSYLYKGYFVLGTSMKKLTIILYLLSCSIGSVVKGFLSLLGPNEESHI
        NEGGSYLYK YF LGTSMKKLTI+LYLLSCS GSVV+   SL GPNE++ I
Subjt:  NEGGSYLYKGYFVLGTSMKKLTIILYLLSCSIGSVVKGFLSLLGPNEESHI
A0A286KTW4 Protein Ycf21.9e-1176.47Show/hide
Query:  NEGGSYLYKGYFVLGTSMKKLTIILYLLSCSIGSVVKGFLSLLGPNEESHI
        NEGGSYLYK YF LGTSMKKLTI+LYLLSCS GSVV+   SL GPNE++ I
Subjt:  NEGGSYLYKGYFVLGTSMKKLTIILYLLSCSIGSVVKGFLSLLGPNEESHI
A0A286QM47 Protein Ycf21.9e-1176.47Show/hide
Query:  NEGGSYLYKGYFVLGTSMKKLTIILYLLSCSIGSVVKGFLSLLGPNEESHI
        NEGGSYLYK YF LGTSMKKLTI+LYLLSCS GSVV+   SL GPNE++ I
Subjt:  NEGGSYLYKGYFVLGTSMKKLTIILYLLSCSIGSVVKGFLSLLGPNEESHI
A0A291IAJ3 Protein Ycf21.9e-1176.47Show/hide
Query:  NEGGSYLYKGYFVLGTSMKKLTIILYLLSCSIGSVVKGFLSLLGPNEESHI
        NEGGSYLYK YF LGTSMKKLTI+LYLLSCS GSVV+   SL GPNE++ I
Subjt:  NEGGSYLYKGYFVLGTSMKKLTIILYLLSCSIGSVVKGFLSLLGPNEESHI
A0A291IAS5 Protein Ycf21.9e-1176.47Show/hide
Query:  NEGGSYLYKGYFVLGTSMKKLTIILYLLSCSIGSVVKGFLSLLGPNEESHI
        NEGGSYLYK YF LGTSMKKLTI+LYLLSCS GSVV+   SL GPNE++ I
Subjt:  NEGGSYLYKGYFVLGTSMKKLTIILYLLSCSIGSVVKGFLSLLGPNEESHI
SwissProt top hitse value%identityAlignment
A0ZZ78 Protein Ycf23.7e-1270.59Show/hide
Query:  NEGGSYLYKGYFVLGTSMKKLTIILYLLSCSIGSVVKGFLSLLGPNEESHI
        NEG SYLYK YF LGTSMKKLTI+LYLLSCS GSV +   SL GP+E++ I
Subjt:  NEGGSYLYKGYFVLGTSMKKLTIILYLLSCSIGSVVKGFLSLLGPNEESHI
B1A978 Protein Ycf23.7e-1270.59Show/hide
Query:  NEGGSYLYKGYFVLGTSMKKLTIILYLLSCSIGSVVKGFLSLLGPNEESHI
        NEG SYLYK YF LGTSMKKLTI+LYLLSCS GSV +   SL GP+E++ I
Subjt:  NEGGSYLYKGYFVLGTSMKKLTIILYLLSCSIGSVVKGFLSLLGPNEESHI
Q09MB4 Protein Ycf23.7e-1270.59Show/hide
Query:  NEGGSYLYKGYFVLGTSMKKLTIILYLLSCSIGSVVKGFLSLLGPNEESHI
        NEG SYLYK YF LGTSMKKLTI+LYLLSCS GSV +   SL GP+E++ I
Subjt:  NEGGSYLYKGYFVLGTSMKKLTIILYLLSCSIGSVVKGFLSLLGPNEESHI
Q2L949 Protein Ycf23.7e-1270.59Show/hide
Query:  NEGGSYLYKGYFVLGTSMKKLTIILYLLSCSIGSVVKGFLSLLGPNEESHI
        NEG SYLYK YF LGTSMKKLTI+LYLLSCS GSV +   SL GP+E++ I
Subjt:  NEGGSYLYKGYFVLGTSMKKLTIILYLLSCSIGSVVKGFLSLLGPNEESHI
Q49KT6 Protein Ycf22.8e-1268.63Show/hide
Query:  NEGGSYLYKGYFVLGTSMKKLTIILYLLSCSIGSVVKGFLSLLGPNEESHI
        NEG SYLYK YF LGTSMKKLTI+LYLLSCS GS+ +   SL GP+E++ I
Subjt:  NEGGSYLYKGYFVLGTSMKKLTIILYLLSCSIGSVVKGFLSLLGPNEESHI
Arabidopsis top hitse value%identityAlignment
ATCG00860.1 Chloroplast Ycf2;ATPase, AAA type, core5.0e-1266.67Show/hide
Query:  NEGGSYLYKGYFVLGTSMKKLTIILYLLSCSIGSVVKGFLSLLGPNEESHI
        NEG SYLYK YF LGTSMKK TI+LYLLSCS GSV +   SL  P+E++ I
Subjt:  NEGGSYLYKGYFVLGTSMKKLTIILYLLSCSIGSVVKGFLSLLGPNEESHI
ATCG01280.1 Chloroplast Ycf2;ATPase, AAA type, core5.0e-1266.67Show/hide
Query:  NEGGSYLYKGYFVLGTSMKKLTIILYLLSCSIGSVVKGFLSLLGPNEESHI
        NEG SYLYK YF LGTSMKK TI+LYLLSCS GSV +   SL  P+E++ I
Subjt:  NEGGSYLYKGYFVLGTSMKKLTIILYLLSCSIGSVVKGFLSLLGPNEESHI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AATGAAGGCGGTTCTTATTTGTACAAAGGGTACTTTGTACTTGGAACAAGTATGAAAAAATTAACAATTATTCTTTATCTTTTGAGTTGTTCTATCGGATCAGTCGTTAA
AGGCTTTTTGTCTCTACTTGGACCCAATGAAGAATCACACATT
mRNA sequenceShow/hide mRNA sequence
AATGAAGGCGGTTCTTATTTGTACAAAGGGTACTTTGTACTTGGAACAAGTATGAAAAAATTAACAATTATTCTTTATCTTTTGAGTTGTTCTATCGGATCAGTCGTTAA
AGGCTTTTTGTCTCTACTTGGACCCAATGAAGAATCACACATT
Protein sequenceShow/hide protein sequence
NEGGSYLYKGYFVLGTSMKKLTIILYLLSCSIGSVVKGFLSLLGPNEESHI