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MS019216 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019216
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionSecretion protein HlyD family protein
Genome locationscaffold554:294177..294566
RNA-Seq ExpressionMS019216
SyntenyMS019216
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033890.1 Secretion protein HlyD family protein [Cucumis melo var. makuwa]1.2e-1641.54Show/hide
Query:  FTRLVVSSGQISDELEHLHPNYVPRDELNRAITSLDQANCLLEGAQCELEAEKKRSQGKLADLRMRVDKVKAQLTNSEFFVEEFEKTVKYVNMQNATMES
        FTR  +S G++ DEL HL+ NYVPR+EL R       AN  LE A+ EL   +  SQ K+  L+ ++ + K+QL++++   E+F KT ++V MQN  ME 
Subjt:  FTRLVVSSGQISDELEHLHPNYVPRDELNRAITSLDQANCLLEGAQCELEAEKKRSQGKLADLRMRVDKVKAQLTNSEFFVEEFEKTVKYVNMQNATMES

Query:  GVSWSLRQLSNENPWVNYFVLHECFRVKCN
        GV+WS+RQ S E+P +++  L   F+  C+
Subjt:  GVSWSLRQLSNENPWVNYFVLHECFRVKCN

TYK01274.1 Secretion protein HlyD family protein [Cucumis melo var. makuwa]1.2e-1641.54Show/hide
Query:  FTRLVVSSGQISDELEHLHPNYVPRDELNRAITSLDQANCLLEGAQCELEAEKKRSQGKLADLRMRVDKVKAQLTNSEFFVEEFEKTVKYVNMQNATMES
        FTR  +S G++ DEL HL+ NYVPR+EL R       AN  LE A+ EL   +  SQ K+  L+ ++ + K+QL++++   E+F KT ++V MQN  ME 
Subjt:  FTRLVVSSGQISDELEHLHPNYVPRDELNRAITSLDQANCLLEGAQCELEAEKKRSQGKLADLRMRVDKVKAQLTNSEFFVEEFEKTVKYVNMQNATMES

Query:  GVSWSLRQLSNENPWVNYFVLHECFRVKCN
        GV+WS+RQ S E+P +++  L   F+  C+
Subjt:  GVSWSLRQLSNENPWVNYFVLHECFRVKCN

XP_008457530.1 PREDICTED: uncharacterized protein LOC103497199 isoform X1 [Cucumis melo]1.2e-1641.54Show/hide
Query:  FTRLVVSSGQISDELEHLHPNYVPRDELNRAITSLDQANCLLEGAQCELEAEKKRSQGKLADLRMRVDKVKAQLTNSEFFVEEFEKTVKYVNMQNATMES
        FTR  +S G++ DEL HL+ NYVPR+EL R       AN  LE A+ EL   +  SQ K+  L+ ++ + K+QL++++   E+F KT ++V MQN  ME 
Subjt:  FTRLVVSSGQISDELEHLHPNYVPRDELNRAITSLDQANCLLEGAQCELEAEKKRSQGKLADLRMRVDKVKAQLTNSEFFVEEFEKTVKYVNMQNATMES

Query:  GVSWSLRQLSNENPWVNYFVLHECFRVKCN
        GV+WS+RQ S E+P +++  L   F+  C+
Subjt:  GVSWSLRQLSNENPWVNYFVLHECFRVKCN

XP_016902110.1 PREDICTED: uncharacterized protein LOC103497199 isoform X3 [Cucumis melo]1.2e-1641.54Show/hide
Query:  FTRLVVSSGQISDELEHLHPNYVPRDELNRAITSLDQANCLLEGAQCELEAEKKRSQGKLADLRMRVDKVKAQLTNSEFFVEEFEKTVKYVNMQNATMES
        FTR  +S G++ DEL HL+ NYVPR+EL R       AN  LE A+ EL   +  SQ K+  L+ ++ + K+QL++++   E+F KT ++V MQN  ME 
Subjt:  FTRLVVSSGQISDELEHLHPNYVPRDELNRAITSLDQANCLLEGAQCELEAEKKRSQGKLADLRMRVDKVKAQLTNSEFFVEEFEKTVKYVNMQNATMES

Query:  GVSWSLRQLSNENPWVNYFVLHECFRVKCN
        GV+WS+RQ S E+P +++  L   F+  C+
Subjt:  GVSWSLRQLSNENPWVNYFVLHECFRVKCN

XP_022156747.1 uncharacterized protein LOC111023586 [Momordica charantia]9.1e-2851.56Show/hide
Query:  FTRLVVSSGQISDELEHLHPNYVPRDELNRAITSLDQANCLLEGAQCELEAEKKRSQGKLADLRMRVDKVKAQLTNSEFFVEEFEKTVKYVNMQNATMES
        F RLVV SG ++DE+ HL  +Y PR++L +AI+SL+QAN LLEG Q +LE EK++S+ +LA+L+ R+D+V A+L NSEF   EF+KT +YV++QN+ ME 
Subjt:  FTRLVVSSGQISDELEHLHPNYVPRDELNRAITSLDQANCLLEGAQCELEAEKKRSQGKLADLRMRVDKVKAQLTNSEFFVEEFEKTVKYVNMQNATMES

Query:  GVSWSLRQLSNENPWVNYFVLHECFRVK
        GV W LRQ+S ++P ++   L E FR +
Subjt:  GVSWSLRQLSNENPWVNYFVLHECFRVK

TrEMBL top hitse value%identityAlignment
A0A1S3C5B2 uncharacterized protein LOC103497199 isoform X15.9e-1741.54Show/hide
Query:  FTRLVVSSGQISDELEHLHPNYVPRDELNRAITSLDQANCLLEGAQCELEAEKKRSQGKLADLRMRVDKVKAQLTNSEFFVEEFEKTVKYVNMQNATMES
        FTR  +S G++ DEL HL+ NYVPR+EL R       AN  LE A+ EL   +  SQ K+  L+ ++ + K+QL++++   E+F KT ++V MQN  ME 
Subjt:  FTRLVVSSGQISDELEHLHPNYVPRDELNRAITSLDQANCLLEGAQCELEAEKKRSQGKLADLRMRVDKVKAQLTNSEFFVEEFEKTVKYVNMQNATMES

Query:  GVSWSLRQLSNENPWVNYFVLHECFRVKCN
        GV+WS+RQ S E+P +++  L   F+  C+
Subjt:  GVSWSLRQLSNENPWVNYFVLHECFRVKCN

A0A1S4E2A9 uncharacterized protein LOC103497199 isoform X35.9e-1741.54Show/hide
Query:  FTRLVVSSGQISDELEHLHPNYVPRDELNRAITSLDQANCLLEGAQCELEAEKKRSQGKLADLRMRVDKVKAQLTNSEFFVEEFEKTVKYVNMQNATMES
        FTR  +S G++ DEL HL+ NYVPR+EL R       AN  LE A+ EL   +  SQ K+  L+ ++ + K+QL++++   E+F KT ++V MQN  ME 
Subjt:  FTRLVVSSGQISDELEHLHPNYVPRDELNRAITSLDQANCLLEGAQCELEAEKKRSQGKLADLRMRVDKVKAQLTNSEFFVEEFEKTVKYVNMQNATMES

Query:  GVSWSLRQLSNENPWVNYFVLHECFRVKCN
        GV+WS+RQ S E+P +++  L   F+  C+
Subjt:  GVSWSLRQLSNENPWVNYFVLHECFRVKCN

A0A5A7SSF9 Secretion protein HlyD family protein5.9e-1741.54Show/hide
Query:  FTRLVVSSGQISDELEHLHPNYVPRDELNRAITSLDQANCLLEGAQCELEAEKKRSQGKLADLRMRVDKVKAQLTNSEFFVEEFEKTVKYVNMQNATMES
        FTR  +S G++ DEL HL+ NYVPR+EL R       AN  LE A+ EL   +  SQ K+  L+ ++ + K+QL++++   E+F KT ++V MQN  ME 
Subjt:  FTRLVVSSGQISDELEHLHPNYVPRDELNRAITSLDQANCLLEGAQCELEAEKKRSQGKLADLRMRVDKVKAQLTNSEFFVEEFEKTVKYVNMQNATMES

Query:  GVSWSLRQLSNENPWVNYFVLHECFRVKCN
        GV+WS+RQ S E+P +++  L   F+  C+
Subjt:  GVSWSLRQLSNENPWVNYFVLHECFRVKCN

A0A5D3BQ22 Secretion protein HlyD family protein5.9e-1741.54Show/hide
Query:  FTRLVVSSGQISDELEHLHPNYVPRDELNRAITSLDQANCLLEGAQCELEAEKKRSQGKLADLRMRVDKVKAQLTNSEFFVEEFEKTVKYVNMQNATMES
        FTR  +S G++ DEL HL+ NYVPR+EL R       AN  LE A+ EL   +  SQ K+  L+ ++ + K+QL++++   E+F KT ++V MQN  ME 
Subjt:  FTRLVVSSGQISDELEHLHPNYVPRDELNRAITSLDQANCLLEGAQCELEAEKKRSQGKLADLRMRVDKVKAQLTNSEFFVEEFEKTVKYVNMQNATMES

Query:  GVSWSLRQLSNENPWVNYFVLHECFRVKCN
        GV+WS+RQ S E+P +++  L   F+  C+
Subjt:  GVSWSLRQLSNENPWVNYFVLHECFRVKCN

A0A6J1DSS1 uncharacterized protein LOC1110235864.4e-2851.56Show/hide
Query:  FTRLVVSSGQISDELEHLHPNYVPRDELNRAITSLDQANCLLEGAQCELEAEKKRSQGKLADLRMRVDKVKAQLTNSEFFVEEFEKTVKYVNMQNATMES
        F RLVV SG ++DE+ HL  +Y PR++L +AI+SL+QAN LLEG Q +LE EK++S+ +LA+L+ R+D+V A+L NSEF   EF+KT +YV++QN+ ME 
Subjt:  FTRLVVSSGQISDELEHLHPNYVPRDELNRAITSLDQANCLLEGAQCELEAEKKRSQGKLADLRMRVDKVKAQLTNSEFFVEEFEKTVKYVNMQNATMES

Query:  GVSWSLRQLSNENPWVNYFVLHECFRVK
        GV W LRQ+S ++P ++   L E FR +
Subjt:  GVSWSLRQLSNENPWVNYFVLHECFRVK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTTACTCGCCTGGTGGTCTCTTCCGGTCAGATTAGTGACGAGCTTGAACACCTTCATCCAAATTATGTCCCACGGGATGAGCTCAATCGAGCCATAACCTCTCTTGACCA
AGCAAATTGCTTGCTAGAAGGTGCACAATGTGAGCTTGAGGCCGAGAAGAAAAGGTCTCAGGGCAAACTAGCTGATTTACGAATGAGGGTTGATAAGGTGAAGGCTCAGC
TCACCAACTCCGAATTTTTTGTAGAAGAGTTCGAGAAAACTGTGAAATACGTCAATATGCAGAATGCTACCATGGAAAGCGGTGTTTCTTGGTCACTCCGTCAACTGTCA
AACGAAAATCCTTGGGTGAATTATTTTGTCCTCCATGAATGTTTCAGGGTCAAATGTAAT
mRNA sequenceShow/hide mRNA sequence
TTTACTCGCCTGGTGGTCTCTTCCGGTCAGATTAGTGACGAGCTTGAACACCTTCATCCAAATTATGTCCCACGGGATGAGCTCAATCGAGCCATAACCTCTCTTGACCA
AGCAAATTGCTTGCTAGAAGGTGCACAATGTGAGCTTGAGGCCGAGAAGAAAAGGTCTCAGGGCAAACTAGCTGATTTACGAATGAGGGTTGATAAGGTGAAGGCTCAGC
TCACCAACTCCGAATTTTTTGTAGAAGAGTTCGAGAAAACTGTGAAATACGTCAATATGCAGAATGCTACCATGGAAAGCGGTGTTTCTTGGTCACTCCGTCAACTGTCA
AACGAAAATCCTTGGGTGAATTATTTTGTCCTCCATGAATGTTTCAGGGTCAAATGTAAT
Protein sequenceShow/hide protein sequence
FTRLVVSSGQISDELEHLHPNYVPRDELNRAITSLDQANCLLEGAQCELEAEKKRSQGKLADLRMRVDKVKAQLTNSEFFVEEFEKTVKYVNMQNATMESGVSWSLRQLS
NENPWVNYFVLHECFRVKCN