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MS019237 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019237
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionEnzymatic polyprotein
Genome locationscaffold156:218333..218627
RNA-Seq ExpressionMS019237
SyntenyMS019237
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033914.1 polyprotein [Cucumis melo var. makuwa]3.4e-1142.31Show/hide
Query:  GLNVQILLMLRDKRHLNFGNSILTVVESNLERGSY-----PNFTL-LSDPHIISSLILDVKIQNLRLELESEPNLVIFRIHHKLMHSHVSPKDLKSSPRD
        GL+V I + LRDKRHLNF +S+L +V+SNL+ G       P FT+ L D +I   L LDV+ + LRL+  S P  V++ +++K+M+++ SPK L  SP++
Subjt:  GLNVQILLMLRDKRHLNFGNSILTVVESNLERGSY-----PNFTL-LSDPHIISSLILDVKIQNLRLELESEPNLVIFRIHHKLMHSHVSPKDLKSSPRD

Query:  HLLI
        + ++
Subjt:  HLLI

KAA0041674.1 movement protein [Cucumis melo var. makuwa]7.6e-1144.23Show/hide
Query:  GLNVQILLMLRDKRHLNFGNSILTVVESNLERGSY-----PNFTL-LSDPHIISSLILDVKIQNLRLELESEPNLVIFRIHHKLMHSHVSPKDLKSSPRD
        GL+V + L LRDKRHL F  S+L +V+SNLE+G       P+ T+ L D +I+ ++ LDV  Q L L+  S P  V +RI+ KLMH+++SPK L  SP+ 
Subjt:  GLNVQILLMLRDKRHLNFGNSILTVVESNLERGSY-----PNFTL-LSDPHIISSLILDVKIQNLRLELESEPNLVIFRIHHKLMHSHVSPKDLKSSPRD

Query:  HLLI
        + ++
Subjt:  HLLI

KAA0054118.1 uncharacterized protein E6C27_scaffold131G00290 [Cucumis melo var. makuwa]4.0e-1245.19Show/hide
Query:  GLNVQILLMLRDKRHLNFGNSILTVVESNLERGSY-----PNFTL-LSDPHIISSLILDVKIQNLRLELESEPNLVIFRIHHKLMHSHVSPKDLKSSPRD
        GL+V + L LRDKRHL F +S+L +V+SNLE+G       PN T+ L D +I+ ++ LDV  Q L L+  S P  V +RI+ KLMH+++SPK+L  SP+ 
Subjt:  GLNVQILLMLRDKRHLNFGNSILTVVESNLERGSY-----PNFTL-LSDPHIISSLILDVKIQNLRLELESEPNLVIFRIHHKLMHSHVSPKDLKSSPRD

Query:  HLLI
        + ++
Subjt:  HLLI

KAA0066201.1 Enzymatic polyprotein [Cucumis melo var. makuwa]7.6e-1144.23Show/hide
Query:  GLNVQILLMLRDKRHLNFGNSILTVVESNLERGSY-----PNFTL-LSDPHIISSLILDVKIQNLRLELESEPNLVIFRIHHKLMHSHVSPKDLKSSPRD
        G +V + L LRDKRHL F  S+L +V+SNLE+G       P  T+ L D +I+ +L LDV  Q L L+  S P  V +RI+ KLMH+++SPK L  SP+ 
Subjt:  GLNVQILLMLRDKRHLNFGNSILTVVESNLERGSY-----PNFTL-LSDPHIISSLILDVKIQNLRLELESEPNLVIFRIHHKLMHSHVSPKDLKSSPRD

Query:  HLLI
        + ++
Subjt:  HLLI

TYK01213.1 Enzymatic polyprotein [Cucumis melo var. makuwa]7.6e-1144.23Show/hide
Query:  GLNVQILLMLRDKRHLNFGNSILTVVESNLERGSY-----PNFTL-LSDPHIISSLILDVKIQNLRLELESEPNLVIFRIHHKLMHSHVSPKDLKSSPRD
        G +V + L LRDKRHL F  S+L +V+SNLE+G       P  T+ L D +I+ +L LDV  Q L L+  S P  V +RI+ KLMH+++SPK L  SP+ 
Subjt:  GLNVQILLMLRDKRHLNFGNSILTVVESNLERGSY-----PNFTL-LSDPHIISSLILDVKIQNLRLELESEPNLVIFRIHHKLMHSHVSPKDLKSSPRD

Query:  HLLI
        + ++
Subjt:  HLLI

TrEMBL top hitse value%identityAlignment
A0A251T9F0 Putative viral movement protein3.3e-1240.38Show/hide
Query:  GLNVQILLMLRDKRHLNFGNSILTVVESNLERG-----SYPNFTL-LSDPHIISSLILDVKIQNLRLELESEPNLVIFRIHHKLMHSHVSPKDLKSSPRD
        G++  +LL+LRD RH NF NS+L + ESN+  G      YPNF++ L DP+I+ +L L +K +NL  + ++   +VI+RI++K M + + PK    SP+D
Subjt:  GLNVQILLMLRDKRHLNFGNSILTVVESNLERG-----SYPNFTL-LSDPHIISSLILDVKIQNLRLELESEPNLVIFRIHHKLMHSHVSPKDLKSSPRD

Query:  HLLI
          +I
Subjt:  HLLI

A0A5A7UGF0 Uncharacterized protein1.9e-1245.19Show/hide
Query:  GLNVQILLMLRDKRHLNFGNSILTVVESNLERGSY-----PNFTL-LSDPHIISSLILDVKIQNLRLELESEPNLVIFRIHHKLMHSHVSPKDLKSSPRD
        GL+V + L LRDKRHL F +S+L +V+SNLE+G       PN T+ L D +I+ ++ LDV  Q L L+  S P  V +RI+ KLMH+++SPK+L  SP+ 
Subjt:  GLNVQILLMLRDKRHLNFGNSILTVVESNLERGSY-----PNFTL-LSDPHIISSLILDVKIQNLRLELESEPNLVIFRIHHKLMHSHVSPKDLKSSPRD

Query:  HLLI
        + ++
Subjt:  HLLI

A0A5A7VKK8 Enzymatic polyprotein3.7e-1144.23Show/hide
Query:  GLNVQILLMLRDKRHLNFGNSILTVVESNLERGSY-----PNFTL-LSDPHIISSLILDVKIQNLRLELESEPNLVIFRIHHKLMHSHVSPKDLKSSPRD
        G +V + L LRDKRHL F  S+L +V+SNLE+G       P  T+ L D +I+ +L LDV  Q L L+  S P  V +RI+ KLMH+++SPK L  SP+ 
Subjt:  GLNVQILLMLRDKRHLNFGNSILTVVESNLERGSY-----PNFTL-LSDPHIISSLILDVKIQNLRLELESEPNLVIFRIHHKLMHSHVSPKDLKSSPRD

Query:  HLLI
        + ++
Subjt:  HLLI

A0A5D3BN76 Enzymatic polyprotein3.7e-1144.23Show/hide
Query:  GLNVQILLMLRDKRHLNFGNSILTVVESNLERGSY-----PNFTL-LSDPHIISSLILDVKIQNLRLELESEPNLVIFRIHHKLMHSHVSPKDLKSSPRD
        G +V + L LRDKRHL F  S+L +V+SNLE+G       P  T+ L D +I+ +L LDV  Q L L+  S P  V +RI+ KLMH+++SPK L  SP+ 
Subjt:  GLNVQILLMLRDKRHLNFGNSILTVVESNLERGSY-----PNFTL-LSDPHIISSLILDVKIQNLRLELESEPNLVIFRIHHKLMHSHVSPKDLKSSPRD

Query:  HLLI
        + ++
Subjt:  HLLI

A0A5D3C4I7 Movement protein3.7e-1144.23Show/hide
Query:  GLNVQILLMLRDKRHLNFGNSILTVVESNLERGSY-----PNFTL-LSDPHIISSLILDVKIQNLRLELESEPNLVIFRIHHKLMHSHVSPKDLKSSPRD
        GL+V + L LRDKRHL F  S+L +V+SNLE+G       P+ T+ L D +I+ ++ LDV  Q L L+  S P  V +RI+ KLMH+++SPK L  SP+ 
Subjt:  GLNVQILLMLRDKRHLNFGNSILTVVESNLERGSY-----PNFTL-LSDPHIISSLILDVKIQNLRLELESEPNLVIFRIHHKLMHSHVSPKDLKSSPRD

Query:  HLLI
        + ++
Subjt:  HLLI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGTCTAAATGTCCAAATATTACTTATGCTACGCGATAAAAGACATTTAAATTTTGGAAACTCTATTCTCACTGTAGTTGAATCCAACCTTGAGCGAGGCTCGTAT
CCAAACTTCACTCTCTTAAGTGACCCACATATAATTTCCTCACTGATTTTGGATGTTAAAATTCAAAACTTAAGACTAGAATTAGAATCCGAACCGAATCTAGTC
ATCTTTAGGATTCATCACAAATTAATGCATTCTCATGTTTCTCCTAAAGACTTAAAATCCTCTCCAAGAGACCACCTACTTATA
mRNA sequenceShow/hide mRNA sequence
GGTCTAAATGTCCAAATATTACTTATGCTACGCGATAAAAGACATTTAAATTTTGGAAACTCTATTCTCACTGTAGTTGAATCCAACCTTGAGCGAGGCTCGTAT
CCAAACTTCACTCTCTTAAGTGACCCACATATAATTTCCTCACTGATTTTGGATGTTAAAATTCAAAACTTAAGACTAGAATTAGAATCCGAACCGAATCTAGTC
ATCTTTAGGATTCATCACAAATTAATGCATTCTCATGTTTCTCCTAAAGACTTAAAATCCTCTCCAAGAGACCACCTACTTATA
Protein sequenceShow/hide protein sequence
GLNVQILLMLRDKRHLNFGNSILTVVESNLERGSYPNFTLLSDPHIISSLILDVKIQNLRLELESEPNLVIFRIHHKLMHSHVSPKDLKSSPRDHLLI