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MS019239 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019239
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold156:229611..229844
RNA-Seq ExpressionMS019239
SyntenyMS019239
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QHO07511.1 Putative ribonuclease H protein [Arachis hypogaea]1.7e-1350Show/hide
Query:  RYLGIPIIHGWFRSSYLQGIINKVYMRLNKWSATSLSLAGRETLVQSVLQAIPTYSMHIFCFPVAVCNKLDQLCRHFL
        +YLG+P++H          IINK+ +RLN W A+SLSLAGR TLV+SVL +IP Y+M     P + CN +D+ CR FL
Subjt:  RYLGIPIIHGWFRSSYLQGIINKVYMRLNKWSATSLSLAGRETLVQSVLQAIPTYSMHIFCFPVAVCNKLDQLCRHFL
QHO25231.1 Putative ribonuclease H protein [Arachis hypogaea]5.8e-1451.28Show/hide
Query:  RYLGIPIIHGWFRSSYLQGIINKVYMRLNKWSATSLSLAGRETLVQSVLQAIPTYSMHIFCFPVAVCNKLDQLCRHFL
        +YLG+PI+H        +GIINK+  RLN W A+SLSLAGR TLV+SVL ++P Y+M     P   CN +D++CR+FL
Subjt:  RYLGIPIIHGWFRSSYLQGIINKVYMRLNKWSATSLSLAGRETLVQSVLQAIPTYSMHIFCFPVAVCNKLDQLCRHFL
XP_016164673.1 uncharacterized protein LOC107607211 [Arachis ipaensis]1.6e-1652.56Show/hide
Query:  RYLGIPIIHGWFRSSYLQGIINKVYMRLNKWSATSLSLAGRETLVQSVLQAIPTYSMHIFCFPVAVCNKLDQLCRHFL
        +YLG+PI+H        +GIINK+++RLN W A+SLSLAGR TLV+SVL ++P Y+MH    P A CN +D++CR+F+
Subjt:  RYLGIPIIHGWFRSSYLQGIINKVYMRLNKWSATSLSLAGRETLVQSVLQAIPTYSMHIFCFPVAVCNKLDQLCRHFL
XP_025664883.1 uncharacterized protein LOC112763420 [Arachis hypogaea]1.6e-1652.56Show/hide
Query:  RYLGIPIIHGWFRSSYLQGIINKVYMRLNKWSATSLSLAGRETLVQSVLQAIPTYSMHIFCFPVAVCNKLDQLCRHFL
        +YLG+PI+H        +GIINK+++RLN W A+SLSLAGR TLV+SVL ++P Y+MH    P A CN +D++CR+F+
Subjt:  RYLGIPIIHGWFRSSYLQGIINKVYMRLNKWSATSLSLAGRETLVQSVLQAIPTYSMHIFCFPVAVCNKLDQLCRHFL
XP_025682388.1 uncharacterized protein LOC112783592 [Arachis hypogaea]1.2e-1448.72Show/hide
Query:  RYLGIPIIHGWFRSSYLQGIINKVYMRLNKWSATSLSLAGRETLVQSVLQAIPTYSMHIFCFPVAVCNKLDQLCRHFL
        +YLG+PI+H        +GIINK++ RLN W A+SLSLAGR TLV+SV+ ++P Y+M     P   CN +D++CR+F+
Subjt:  RYLGIPIIHGWFRSSYLQGIINKVYMRLNKWSATSLSLAGRETLVQSVLQAIPTYSMHIFCFPVAVCNKLDQLCRHFL
TrEMBL top hitse value%identityAlignment
A0A2I0L4K9 Reverse transcriptase domain-containing protein9.1e-1349.33Show/hide
Query:  GIPIIHGWFRSSYLQGIINKVYMRLNKWSATSLSLAGRETLVQSVLQAIPTYSMHIFCFPVAVCNKLDQLCRHFL
        GIPIIH      + + I+ +V+ RL  WS  +LS+AGR TL QSV QAIPTY MHI   P+++C+ +D+ CR+F+
Subjt:  GIPIIHGWFRSSYLQGIINKVYMRLNKWSATSLSLAGRETLVQSVLQAIPTYSMHIFCFPVAVCNKLDQLCRHFL
A0A445EHD6 Uncharacterized protein1.4e-1351.28Show/hide
Query:  RYLGIPIIHGWFRSSYLQGIINKVYMRLNKWSATSLSLAGRETLVQSVLQAIPTYSMHIFCFPVAVCNKLDQLCRHFL
        +YLG+P+ H    SS    II+K+  RLN W A+SLSLAGR TLV+SVL +IP+Y+M     P   CN +D+ CR+FL
Subjt:  RYLGIPIIHGWFRSSYLQGIINKVYMRLNKWSATSLSLAGRETLVQSVLQAIPTYSMHIFCFPVAVCNKLDQLCRHFL
A0A4D8YZY2 Reverse transcriptase domain-containing protein5.3e-1351.28Show/hide
Query:  RYLGIPIIHGWFRSSYLQGIINKVYMRLNKWSATSLSLAGRETLVQSVLQAIPTYSMHIFCFPVAVCNKLDQLCRHFL
        +YLGIPI HG    +  Q +I+KV  RL+ WSA+SLSLAGR TL ++VL AIP+Y M +   P AV  ++++L RHF+
Subjt:  RYLGIPIIHGWFRSSYLQGIINKVYMRLNKWSATSLSLAGRETLVQSVLQAIPTYSMHIFCFPVAVCNKLDQLCRHFL
A0A4Y1QPA2 Zinc ion-binding protein1.5e-1252.56Show/hide
Query:  RYLGIPIIHGWFRSSYLQGIINKVYMRLNKWSATSLSLAGRETLVQSVLQAIPTYSMHIFCFPVAVCNKLDQLCRHFL
        +YLG+PIIH        Q II+KV  RL+ W + +LS+AGR TL+QSV  AIP YSM     P +VC+KLDQL ++FL
Subjt:  RYLGIPIIHGWFRSSYLQGIINKVYMRLNKWSATSLSLAGRETLVQSVLQAIPTYSMHIFCFPVAVCNKLDQLCRHFL
A0A6P4B3X6 uncharacterized protein LOC1074617871.8e-1347.44Show/hide
Query:  RYLGIPIIHGWFRSSYLQGIINKVYMRLNKWSATSLSLAGRETLVQSVLQAIPTYSMHIFCFPVAVCNKLDQLCRHFL
        +YLG+P++H        +GIINK++ RLN   A+SLSLAGR TLV+SVL ++P Y+M     P + CN +D++CR+F+
Subjt:  RYLGIPIIHGWFRSSYLQGIINKVYMRLNKWSATSLSLAGRETLVQSVLQAIPTYSMHIFCFPVAVCNKLDQLCRHFL
SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657507.2e-0735.14Show/hide
Query:  IPIIHGWFRSSYLQGIINKVYMRLNKWSATSLSLAGRETLVQSVLQAIPTYSMHIFCFPVAVCNKLDQLCRHFL
        +P++           I+ +V  R++ W   +LS AGR TL ++VL ++P +SM     P ++ N+LDQL R FL
Subjt:  IPIIHGWFRSSYLQGIINKVYMRLNKWSATSLSLAGRETLVQSVLQAIPTYSMHIFCFPVAVCNKLDQLCRHFL
Arabidopsis top hitse value%identityAlignment
AT3G24255.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.1e-0934.62Show/hide
Query:  RYLGIPIIHGWFRSSYLQGIINKVYMRLNKWSATSLSLAGRETLVQSVLQAIPTYSMHIFCFPVAVCNKLDQLCRHFL
        RYLG+P++     +S    ++ K+ +R+ KW+A  LS AGR  L+ SV+ ++  + M  F  P A   ++D +C  FL
Subjt:  RYLGIPIIHGWFRSSYLQGIINKVYMRLNKWSATSLSLAGRETLVQSVLQAIPTYSMHIFCFPVAVCNKLDQLCRHFL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGATACTTAGGGATTCCAATAATCCATGGTTGGTTTCGTAGCTCTTATTTGCAGGGAATAATAAACAAAGTATATATGAGGCTTAACAAATGGTCAGCGACTTCC
TTATCTCTTGCTGGAAGGGAAACCCTAGTCCAATCTGTCCTACAGGCTATTCCAACATATTCGATGCATATTTTTTGCTTTCCAGTTGCAGTGTGCAACAAATTA
GATCAACTATGTAGACATTTCCTT
mRNA sequenceShow/hide mRNA sequence
AGATACTTAGGGATTCCAATAATCCATGGTTGGTTTCGTAGCTCTTATTTGCAGGGAATAATAAACAAAGTATATATGAGGCTTAACAAATGGTCAGCGACTTCC
TTATCTCTTGCTGGAAGGGAAACCCTAGTCCAATCTGTCCTACAGGCTATTCCAACATATTCGATGCATATTTTTTGCTTTCCAGTTGCAGTGTGCAACAAATTA
GATCAACTATGTAGACATTTCCTT
Protein sequenceShow/hide protein sequence
RYLGIPIIHGWFRSSYLQGIINKVYMRLNKWSATSLSLAGRETLVQSVLQAIPTYSMHIFCFPVAVCNKLDQLCRHFL