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MS019242 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019242
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein HGH1 homolog
Genome locationscaffold156:241822..241950
RNA-Seq ExpressionMS019242
SyntenyMS019242
Gene Ontology termsNA
InterPro domainsIPR007206 - Protein HGH1 C-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG5521198.1 hypothetical protein RHGRI_033678 [Rhododendron griersonianum]2.3e-1285.37Show/hide
Query:  YQEEGRRAFWSINGPKILQVGYEDEEDPKVMEAFERVGSLV
        YQE GRRA WS+NGP+ILQVGYEDEEDPKVMEA+ERVGSL+
Subjt:  YQEEGRRAFWSINGPKILQVGYEDEEDPKVMEAFERVGSLV
TXG56489.1 hypothetical protein EZV62_017802 [Acer yangbiense]1.4e-1290Show/hide
Query:  QEEGRRAFWSINGPKILQVGYEDEEDPKVMEAFERVGSLV
        QE GRRAFWS+NGP+ILQVGYEDEEDPKVMEAFERVGSL+
Subjt:  QEEGRRAFWSINGPKILQVGYEDEEDPKVMEAFERVGSLV
XP_022157089.1 protein HGH1 homolog isoform X1 [Momordica charantia]4.6e-1395Show/hide
Query:  QEEGRRAFWSINGPKILQVGYEDEEDPKVMEAFERVGSLV
        QE GRRAFWSINGPKILQVGYEDEEDPKVMEAFERVGSL+
Subjt:  QEEGRRAFWSINGPKILQVGYEDEEDPKVMEAFERVGSLV
XP_022157091.1 protein HGH1 homolog isoform X2 [Momordica charantia]4.6e-1395Show/hide
Query:  QEEGRRAFWSINGPKILQVGYEDEEDPKVMEAFERVGSLV
        QE GRRAFWSINGPKILQVGYEDEEDPKVMEAFERVGSL+
Subjt:  QEEGRRAFWSINGPKILQVGYEDEEDPKVMEAFERVGSLV
XP_022157092.1 protein HGH1 homolog isoform X3 [Momordica charantia]4.6e-1395Show/hide
Query:  QEEGRRAFWSINGPKILQVGYEDEEDPKVMEAFERVGSLV
        QE GRRAFWSINGPKILQVGYEDEEDPKVMEAFERVGSL+
Subjt:  QEEGRRAFWSINGPKILQVGYEDEEDPKVMEAFERVGSLV
TrEMBL top hitse value%identityAlignment
A0A5C7HI20 Protein HGH1 homolog6.5e-1390Show/hide
Query:  QEEGRRAFWSINGPKILQVGYEDEEDPKVMEAFERVGSLV
        QE GRRAFWS+NGP+ILQVGYEDEEDPKVMEAFERVGSL+
Subjt:  QEEGRRAFWSINGPKILQVGYEDEEDPKVMEAFERVGSLV
A0A6J1DTM8 Protein HGH1 homolog2.2e-1395Show/hide
Query:  QEEGRRAFWSINGPKILQVGYEDEEDPKVMEAFERVGSLV
        QE GRRAFWSINGPKILQVGYEDEEDPKVMEAFERVGSL+
Subjt:  QEEGRRAFWSINGPKILQVGYEDEEDPKVMEAFERVGSLV
A0A6J1DVH9 Protein HGH1 homolog2.2e-1395Show/hide
Query:  QEEGRRAFWSINGPKILQVGYEDEEDPKVMEAFERVGSLV
        QE GRRAFWSINGPKILQVGYEDEEDPKVMEAFERVGSL+
Subjt:  QEEGRRAFWSINGPKILQVGYEDEEDPKVMEAFERVGSLV
A0A6J1DWY1 Protein HGH1 homolog2.2e-1395Show/hide
Query:  QEEGRRAFWSINGPKILQVGYEDEEDPKVMEAFERVGSLV
        QE GRRAFWSINGPKILQVGYEDEEDPKVMEAFERVGSL+
Subjt:  QEEGRRAFWSINGPKILQVGYEDEEDPKVMEAFERVGSLV
A0A7J7CYR1 Protein HGH1 homolog1.5e-1290Show/hide
Query:  QEEGRRAFWSINGPKILQVGYEDEEDPKVMEAFERVGSLV
        QE GRRAFWSINGP+ILQVGYEDEEDPKVMEA+ERVGSL+
Subjt:  QEEGRRAFWSINGPKILQVGYEDEEDPKVMEAFERVGSLV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G14300.1 ARM repeat superfamily protein4.9e-1372.5Show/hide
Query:  QEEGRRAFWSINGPKILQVGYEDEEDPKVMEAFERVGSLV
        +E GRRAFWS+NGP+ILQ+GYE EEDPK M A+E+VGSL+
Subjt:  QEEGRRAFWSINGPKILQVGYEDEEDPKVMEAFERVGSLV
AT1G14300.2 ARM repeat superfamily protein2.2e-1375Show/hide
Query:  QEEGRRAFWSINGPKILQVGYEDEEDPKVMEAFERVGSLV
        QE GRRAFWS+NGP+ILQ+GYE EEDPK M A+E+VGSL+
Subjt:  QEEGRRAFWSINGPKILQVGYEDEEDPKVMEAFERVGSLV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TATCAGGAGGAGGGCCGAAGAGCGTTCTGGTCTATCAATGGACCAAAAATACTGCAAGTGGGTTATGAAGACGAGGAAGATCCAAAAGTAATGGAAGCATTTGAG
AGAGTTGGCTCCCTAGTAAGTAAC
mRNA sequenceShow/hide mRNA sequence
TATCAGGAGGAGGGCCGAAGAGCGTTCTGGTCTATCAATGGACCAAAAATACTGCAAGTGGGTTATGAAGACGAGGAAGATCCAAAAGTAATGGAAGCATTTGAG
AGAGTTGGCTCCCTAGTAAGTAAC
Protein sequenceShow/hide protein sequence
YQEEGRRAFWSINGPKILQVGYEDEEDPKVMEAFERVGSLVSN