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MS019245 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019245
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein ALP1-like
Genome locationscaffold156:350038..350363
RNA-Seq ExpressionMS019245
SyntenyMS019245
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3433792.1 hypothetical protein FNV43_RR24895 [Rhamnella rubrinervis]6.7e-2966.36Show/hide
Query:  GPDYVIELLNGNDTICFDYFRMKKCTFITFYKELKVKTNLKASRYLTVQEQVANFLL-IVSNERNRMTAEKFQHSSHIISRSFNRVLKKVCKLGVEIICP
        G DYV+ELLNG+++ C+D FRM K  FITF +ELK KTNLK SR++TVQEQVA FLL I  NERNR+ AE+FQHS   ISR FN VLKKVC LGVE+IC 
Subjt:  GPDYVIELLNGNDTICFDYFRMKKCTFITFYKELKVKTNLKASRYLTVQEQVANFLL-IVSNERNRMTAEKFQHSSHIISRSFNRVLKKVCKLGVEIICP

Query:  PNLDIVT
         N D+V+
Subjt:  PNLDIVT

KAF7123090.1 hypothetical protein RHSIM_Rhsim12G0067000 [Rhododendron simsii]7.2e-2358.49Show/hide
Query:  GPDYVIELLNGNDTICFDYFRMKKCTFITFYKELKVKTNLKASRYLTVQEQVANFLLIVS-NERNRMTAEKFQHSSHIISRSFNRVLKKVCKLGVEIICP
        G DYV+E+LNG++  C   FRMK   FI F + LK+  NLK SRYLT+QEQV  FLL +  NERNR+  E+FQHS H IS  F+RVLK VCKLGV II P
Subjt:  GPDYVIELLNGNDTICFDYFRMKKCTFITFYKELKVKTNLKASRYLTVQEQVANFLLIVS-NERNRMTAEKFQHSSHIISRSFNRVLKKVCKLGVEIICP

Query:  PNLDIV
        P+ D +
Subjt:  PNLDIV

KAF7148819.1 hypothetical protein RHSIM_Rhsim03G0151700 [Rhododendron simsii]5.5e-2358.49Show/hide
Query:  GPDYVIELLNGNDTICFDYFRMKKCTFITFYKELKVKTNLKASRYLTVQEQVANFLLIVS-NERNRMTAEKFQHSSHIISRSFNRVLKKVCKLGVEIICP
        G DYV+E+LNG++  C   FRMK   FI F + LK+  NLK SRYLT+QEQV  FLL +  NERNR+  E+FQHS H IS  F+RVLK VCKLGV II P
Subjt:  GPDYVIELLNGNDTICFDYFRMKKCTFITFYKELKVKTNLKASRYLTVQEQVANFLLIVS-NERNRMTAEKFQHSSHIISRSFNRVLKKVCKLGVEIICP

Query:  PNLDIV
        P+ D +
Subjt:  PNLDIV

KAG8371481.1 hypothetical protein BUALT_Bualt13G0092200 [Buddleja alternifolia]8.8e-2156.6Show/hide
Query:  GPDYVIELLNGNDTICFDYFRMKKCTFITFYKELKVKTNLKASRYLTVQEQVANFLLIVSNE-RNRMTAEKFQHSSHIISRSFNRVLKKVCKLGVEIICP
        G  YV+EL+N N T C+D FRMK   FITF   L     LK SRYL+  EQVA FL I+++   +R+ AEKFQHS   IS+ F+RVLK +CKLGVEII P
Subjt:  GPDYVIELLNGNDTICFDYFRMKKCTFITFYKELKVKTNLKASRYLTVQEQVANFLLIVSNE-RNRMTAEKFQHSSHIISRSFNRVLKKVCKLGVEIICP

Query:  PNLDIV
        PN D V
Subjt:  PNLDIV

KAG8372299.1 hypothetical protein BUALT_Bualt12G0051800 [Buddleja alternifolia]5.2e-2157.55Show/hide
Query:  GPDYVIELLNGNDTICFDYFRMKKCTFITFYKELKVKTNLKASRYLTVQEQVANFLLIVSNE-RNRMTAEKFQHSSHIISRSFNRVLKKVCKLGVEIICP
        G  YV+EL+N N T C+D FRMK   FITF   L  K  LK SRYL+  EQVA FL I+++   +R+ AEKFQHS   IS+ F+RVLK +CKLGVEII P
Subjt:  GPDYVIELLNGNDTICFDYFRMKKCTFITFYKELKVKTNLKASRYLTVQEQVANFLLIVSNE-RNRMTAEKFQHSSHIISRSFNRVLKKVCKLGVEIICP

Query:  PNLDIV
        PN D V
Subjt:  PNLDIV

TrEMBL top hitse value%identityAlignment
A0A0A0LCZ7 Uncharacterized protein7.5e-2651.43Show/hide
Query:  GPDYVIELLNGNDTICFDYFRMKKCTFITFYKELKVKTNL-------------------------------------KASRYLTVQEQVANFLLIVS-NE
        G DYVIELLNGND+ CFD FR ++ TF+ F ++LK KTNL                                     KASRYLTVQE+VA FLLI+S NE
Subjt:  GPDYVIELLNGNDTICFDYFRMKKCTFITFYKELKVKTNL-------------------------------------KASRYLTVQEQVANFLLIVS-NE

Query:  RNRMTAEKFQHSSHIISRSFNRVLKKVCKLGVEIICPPNL
         NR+  E+FQHS H IS +FNRVL+KVCKLG+EII PPN+
Subjt:  RNRMTAEKFQHSSHIISRSFNRVLKKVCKLGVEIICPPNL

A0A1S3E695 protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1-like3.7e-1746.67Show/hide
Query:  GPDYVIELLNGNDTICFDYFRMKKCTFITFYKELKVKTNLKASRYLTVQEQVANFLLIVS-NERNRMTAEKFQHSSHIISRSFNRVLKKVCKLGVEIICP
        G ++V E+LNG++T CFD FRMKK  F+ F  EL+ K  L  SR + V+E+VA FL I+  N R+R+ + +FQHS+  ISR+F  VL+ VC+LG E+I  
Subjt:  GPDYVIELLNGNDTICFDYFRMKKCTFITFYKELKVKTNLKASRYLTVQEQVANFLLIVS-NERNRMTAEKFQHSSHIISRSFNRVLKKVCKLGVEIICP

Query:  PNLDI
         ++++
Subjt:  PNLDI

A0A2P5ATJ1 Uncharacterized protein3.1e-1952.88Show/hide
Query:  GPDYVIELLNGNDTICFDYFRMKKCTFITFYKELKVKTNLKASRYLTVQEQVANFLLIVS-NERNRMTAEKFQHSSHIISRSFNRVLKKVCKLGVEIICP
        G +YV+E+LN     CFD FRM+K  F      LK K  LK S+Y+ V+EQVA FL I+S NER++M A++FQHSS IISR F ++LK +C+LG EI  P
Subjt:  GPDYVIELLNGNDTICFDYFRMKKCTFITFYKELKVKTNLKASRYLTVQEQVANFLLIVS-NERNRMTAEKFQHSSHIISRSFNRVLKKVCKLGVEIICP

Query:  PNLD
        P  D
Subjt:  PNLD

A0A3Q7Y331 protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1-like3.7e-1746.67Show/hide
Query:  GPDYVIELLNGNDTICFDYFRMKKCTFITFYKELKVKTNLKASRYLTVQEQVANFLLIVS-NERNRMTAEKFQHSSHIISRSFNRVLKKVCKLGVEIICP
        G ++V E+LNG++T CFD FRMKK  F+ F  EL+ K  L  SR + V+E+VA FL I+  N R+R+ + +FQHS+  ISR+F  VL+ VC+LG E+I  
Subjt:  GPDYVIELLNGNDTICFDYFRMKKCTFITFYKELKVKTNLKASRYLTVQEQVANFLLIVS-NERNRMTAEKFQHSSHIISRSFNRVLKKVCKLGVEIICP

Query:  PNLDI
         ++++
Subjt:  PNLDI

A0A438IW86 Protein ALP1-like1.3e-1442.72Show/hide
Query:  GPDYVIELLNGNDTICFDYFRMKKCTFITFYKELKVKTNLKASRYLTVQEQVANFLLIVS-NERNRMTAEKFQHSSHIISRSFNRVLKKVCKLGVEIICP
        G  +V +++ G+   C++ FRM K TF+     LK   NL+ +R++TV+E VA FLLIV  N R R+ A++FQHS+ I++R F  V + +C+LG  +ICP
Subjt:  GPDYVIELLNGNDTICFDYFRMKKCTFITFYKELKVKTNLKASRYLTVQEQVANFLLIVS-NERNRMTAEKFQHSSHIISRSFNRVLKKVCKLGVEIICP

Query:  PNL
         N+
Subjt:  PNL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G41980.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)2.4e-0834Show/hide
Query:  GPDYVIELLNGNDTICFDYFRMKKCTFITFYKELKVKTNLKASRYLTVQEQVANFLLIVS-NERNRMTAEKFQHSSHIISRSFNRVLKKVCKLGVEIICP
        G  +V ++LNG +  CF+ FRM K  F      L+ +  L+ +  + ++ Q+A FL I+  N R R   E F +S   ISR FN VL  V  +  +   P
Subjt:  GPDYVIELLNGNDTICFDYFRMKKCTFITFYKELKVKTNLKASRYLTVQEQVANFLLIVS-NERNRMTAEKFQHSSHIISRSFNRVLKKVCKLGVEIICP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGTCCTGATTATGTGATTGAGTTATTAAATGGCAACGACACAATATGCTTTGATTATTTTAGGATGAAAAAATGTACATTCATAACTTTTTACAAAGAATTAAAA
GTTAAAACGAATTTAAAAGCATCTAGGTATCTTACTGTTCAAGAGCAAGTTGCCAATTTTTTGTTAATCGTATCAAATGAAAGGAATCGTATGACAGCAGAAAAA
TTTCAACACTCAAGTCATATCATTTCTCGATCCTTCAACCGTGTTTTAAAGAAAGTTTGCAAGCTTGGGGTAGAAATTATTTGTCCACCCAACTTAGATATTGTA
ACACTA
mRNA sequenceShow/hide mRNA sequence
GGTCCTGATTATGTGATTGAGTTATTAAATGGCAACGACACAATATGCTTTGATTATTTTAGGATGAAAAAATGTACATTCATAACTTTTTACAAAGAATTAAAA
GTTAAAACGAATTTAAAAGCATCTAGGTATCTTACTGTTCAAGAGCAAGTTGCCAATTTTTTGTTAATCGTATCAAATGAAAGGAATCGTATGACAGCAGAAAAA
TTTCAACACTCAAGTCATATCATTTCTCGATCCTTCAACCGTGTTTTAAAGAAAGTTTGCAAGCTTGGGGTAGAAATTATTTGTCCACCCAACTTAGATATTGTA
ACACTA
Protein sequenceShow/hide protein sequence
GPDYVIELLNGNDTICFDYFRMKKCTFITFYKELKVKTNLKASRYLTVQEQVANFLLIVSNERNRMTAEKFQHSSHIISRSFNRVLKKVCKLGVEIICPPNLDIV
TL