; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS019275 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019275
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDynein beta chain, ciliary protein
Genome locationscaffold611:14097..16975
RNA-Seq ExpressionMS019275
SyntenyMS019275
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013632.1 hypothetical protein SDJN02_23799 [Cucurbita argyrosperma subsp. argyrosperma]4.0e-8082.72Show/hide
Query:  MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRKPPPRAIQKAEVPQPRESGALDSGGILGSNSENVPEERDPQFDAMLGQMVGRIKSKPGGKLEMGEAA
        MGQAFRRAAGRIKPASSIDS+ASSLKMESVVDRKPPPRA +KA     RESGALDSG +LGSNSENV EERDPQFDAML QM GRI+SKPGGKLEMGEA+
Subjt:  MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRKPPPRAIQKAEVPQPRESGALDSGGILGSNSENVPEERDPQFDAMLGQMVGRIKSKPGGKLEMGEAA

Query:  VVERYERPMPKLRNTDVKSSRYEDRPAPPGTLNVAQMRHVIQLHEGKAEDHNGTMAVQQIAQRYNVSVTQIHTILQFLSLPPEDTLRAKNK
        VVERY+RPMP+LRNTD+KSS+YEDRPAPPGTLNVAQMRH+I LHEGKAEDH+G M V QIA+RYNV V QI TILQFLSLPPED+L+ K K
Subjt:  VVERYERPMPKLRNTDVKSSRYEDRPAPPGTLNVAQMRHVIQLHEGKAEDHNGTMAVQQIAQRYNVSVTQIHTILQFLSLPPEDTLRAKNK

XP_022138356.1 uncharacterized protein LOC111009550 [Momordica charantia]1.8e-10199.48Show/hide
Query:  MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRKPPPRAIQKAEVPQPRESGALDSGGILGSNSENVPEERDPQFDAMLGQMVGRIKSKPGGKLEMGEAA
        MGQAFRRAAGRIKPASSIDSTASSLKMESVVDR+PPPRAIQKAEVPQPRESGALDSGGILGSNSENVPEERDPQFDAMLGQMVGRIKSKPGGKLEMGEAA
Subjt:  MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRKPPPRAIQKAEVPQPRESGALDSGGILGSNSENVPEERDPQFDAMLGQMVGRIKSKPGGKLEMGEAA

Query:  VVERYERPMPKLRNTDVKSSRYEDRPAPPGTLNVAQMRHVIQLHEGKAEDHNGTMAVQQIAQRYNVSVTQIHTILQFLSLPPEDTLRAKNKDPN
        VVERYERPMPKLRNTDVKSSRYEDRPAPPGTLNVAQMRHVIQLHEGKAEDHNGTMAVQQIAQRYNVSVTQIHTILQFLSLPPEDTLRAKNKDPN
Subjt:  VVERYERPMPKLRNTDVKSSRYEDRPAPPGTLNVAQMRHVIQLHEGKAEDHNGTMAVQQIAQRYNVSVTQIHTILQFLSLPPEDTLRAKNKDPN

XP_022958820.1 uncharacterized protein LOC111459975 [Cucurbita moschata]3.1e-8082.72Show/hide
Query:  MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRKPPPRAIQKAEVPQPRESGALDSGGILGSNSENVPEERDPQFDAMLGQMVGRIKSKPGGKLEMGEAA
        MGQAFRRAAGRIKPASSIDS+ASSLKMESVVDRKPPPRA +KA     RESGALDSG +LGSNSENV EERDPQFDAML QM GRI+SKPGGKLEMGEA+
Subjt:  MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRKPPPRAIQKAEVPQPRESGALDSGGILGSNSENVPEERDPQFDAMLGQMVGRIKSKPGGKLEMGEAA

Query:  VVERYERPMPKLRNTDVKSSRYEDRPAPPGTLNVAQMRHVIQLHEGKAEDHNGTMAVQQIAQRYNVSVTQIHTILQFLSLPPEDTLRAKNK
        VVERY+RPMP+LRNTD+KSS+YEDRPAPPGTLNVAQMRH++ LHEGKAEDH+G M V QIA+RYNV V QI TILQFLSLPPED+LR K K
Subjt:  VVERYERPMPKLRNTDVKSSRYEDRPAPPGTLNVAQMRHVIQLHEGKAEDHNGTMAVQQIAQRYNVSVTQIHTILQFLSLPPEDTLRAKNK

XP_023006464.1 uncharacterized protein LOC111499180 [Cucurbita maxima]2.6e-7982.2Show/hide
Query:  MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRKPPPRAIQKAEVPQPRESGALDSGGILGSNSENVPEERDPQFDAMLGQMVGRIKSKPGGKLEMGEAA
        MGQAFRRAAGRIKPASSIDS+ASSLKMESVVDRKPPPRA +KA     RESG+LDSG +LGSNS NV EERDPQFDAML QM GRI+SKPGGKLEMGEA+
Subjt:  MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRKPPPRAIQKAEVPQPRESGALDSGGILGSNSENVPEERDPQFDAMLGQMVGRIKSKPGGKLEMGEAA

Query:  VVERYERPMPKLRNTDVKSSRYEDRPAPPGTLNVAQMRHVIQLHEGKAEDHNGTMAVQQIAQRYNVSVTQIHTILQFLSLPPEDTLRAKNK
        VVERY RPMPKLRNTD+KSS+YEDRPAPPGTLNVAQMRH+I LHEGKA+DH+G M V QIA+RYNV V+QI TILQFLSLPPED+LR K K
Subjt:  VVERYERPMPKLRNTDVKSSRYEDRPAPPGTLNVAQMRHVIQLHEGKAEDHNGTMAVQQIAQRYNVSVTQIHTILQFLSLPPEDTLRAKNK

XP_023547640.1 uncharacterized protein LOC111806523 [Cucurbita pepo subsp. pepo]2.3e-8083.25Show/hide
Query:  MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRKPPPRAIQKAEVPQPRESGALDSGGILGSNSENVPEERDPQFDAMLGQMVGRIKSKPGGKLEMGEAA
        MGQAFRRAAGRIKPASSIDS+ASSLKMESVVDRKPPPRA++KA     RESGALDSG  LGSNSENV EERDPQFDAML QM GRI+SKPGGKLEMGEA+
Subjt:  MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRKPPPRAIQKAEVPQPRESGALDSGGILGSNSENVPEERDPQFDAMLGQMVGRIKSKPGGKLEMGEAA

Query:  VVERYERPMPKLRNTDVKSSRYEDRPAPPGTLNVAQMRHVIQLHEGKAEDHNGTMAVQQIAQRYNVSVTQIHTILQFLSLPPEDTLRAKNK
        VVERY+RPMP+LRNTD+KSS+YEDRPAPPGTLNVAQMRH+I LHEGKAEDH+G M V QIA+RYNV V QI TILQFLSLPPED+LR K K
Subjt:  VVERYERPMPKLRNTDVKSSRYEDRPAPPGTLNVAQMRHVIQLHEGKAEDHNGTMAVQQIAQRYNVSVTQIHTILQFLSLPPEDTLRAKNK

TrEMBL top hitse value%identityAlignment
A0A0A0KCC5 Uncharacterized protein1.6e-7478.76Show/hide
Query:  MGQAFRRAAGRIKPASSIDS-TASSLKMESVVDRKPPPRAIQKAEVPQPRESGALDSGGILGSNSENVPEERDPQFDAMLGQMVGRIKSKPGGKLEMGEA
        MGQAFRRAAGRIKPASSIDS TASSLKMES+VDRKPPPR  +KA     RESGALDSG +  S+S N+ EERDPQFDAML QMVGRIKSKPGGKLEMGEA
Subjt:  MGQAFRRAAGRIKPASSIDS-TASSLKMESVVDRKPPPRAIQKAEVPQPRESGALDSGGILGSNSENVPEERDPQFDAMLGQMVGRIKSKPGGKLEMGEA

Query:  AVVERYERPMPKLRNTDVKSSRYEDRPAPPGTLNVAQMRHVIQLHEGKAEDHNGTMAVQQIAQRYNVSVTQIHTILQFLSLPPEDTLRAKNKD
        +VVERY RPMPKLR+T++ SS+YEDRPAPPGTLNVAQMR +I LHEGKA+DH+G M + QIA+RYNVSV QI TILQFLSLPPED+LR K KD
Subjt:  AVVERYERPMPKLRNTDVKSSRYEDRPAPPGTLNVAQMRHVIQLHEGKAEDHNGTMAVQQIAQRYNVSVTQIHTILQFLSLPPEDTLRAKNKD

A0A1S3C957 uncharacterized protein LOC103497865 isoform X12.3e-7377.72Show/hide
Query:  MGQAFRRAAGRIKPASSIDS-TASSLKMESVVDRKPPPRAIQKAEVPQPRESGALDSGGILGSNSENVPEERDPQFDAMLGQMVGRIKSKPGGKLEMGEA
        MGQAFRRAAGRIKPASS+DS TASSLKMES+VDRKPPPR  +KA     RESG+LDSG +  S+S N  EERDPQFDAML QMVGRIKSKPGGKLEMGEA
Subjt:  MGQAFRRAAGRIKPASSIDS-TASSLKMESVVDRKPPPRAIQKAEVPQPRESGALDSGGILGSNSENVPEERDPQFDAMLGQMVGRIKSKPGGKLEMGEA

Query:  AVVERYERPMPKLRNTDVKSSRYEDRPAPPGTLNVAQMRHVIQLHEGKAEDHNGTMAVQQIAQRYNVSVTQIHTILQFLSLPPEDTLRAKNKD
        +VVERY RPMPKLR+T++KSS+YEDRPAPPGTLNVAQMR +I LHEGKA+DH+G M   QIA+RYNVSV QI TILQFLSLPPED+LR K  D
Subjt:  AVVERYERPMPKLRNTDVKSSRYEDRPAPPGTLNVAQMRHVIQLHEGKAEDHNGTMAVQQIAQRYNVSVTQIHTILQFLSLPPEDTLRAKNKD

A0A6J1C9H1 uncharacterized protein LOC1110095508.9e-10299.48Show/hide
Query:  MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRKPPPRAIQKAEVPQPRESGALDSGGILGSNSENVPEERDPQFDAMLGQMVGRIKSKPGGKLEMGEAA
        MGQAFRRAAGRIKPASSIDSTASSLKMESVVDR+PPPRAIQKAEVPQPRESGALDSGGILGSNSENVPEERDPQFDAMLGQMVGRIKSKPGGKLEMGEAA
Subjt:  MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRKPPPRAIQKAEVPQPRESGALDSGGILGSNSENVPEERDPQFDAMLGQMVGRIKSKPGGKLEMGEAA

Query:  VVERYERPMPKLRNTDVKSSRYEDRPAPPGTLNVAQMRHVIQLHEGKAEDHNGTMAVQQIAQRYNVSVTQIHTILQFLSLPPEDTLRAKNKDPN
        VVERYERPMPKLRNTDVKSSRYEDRPAPPGTLNVAQMRHVIQLHEGKAEDHNGTMAVQQIAQRYNVSVTQIHTILQFLSLPPEDTLRAKNKDPN
Subjt:  VVERYERPMPKLRNTDVKSSRYEDRPAPPGTLNVAQMRHVIQLHEGKAEDHNGTMAVQQIAQRYNVSVTQIHTILQFLSLPPEDTLRAKNKDPN

A0A6J1H4J6 uncharacterized protein LOC1114599751.5e-8082.72Show/hide
Query:  MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRKPPPRAIQKAEVPQPRESGALDSGGILGSNSENVPEERDPQFDAMLGQMVGRIKSKPGGKLEMGEAA
        MGQAFRRAAGRIKPASSIDS+ASSLKMESVVDRKPPPRA +KA     RESGALDSG +LGSNSENV EERDPQFDAML QM GRI+SKPGGKLEMGEA+
Subjt:  MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRKPPPRAIQKAEVPQPRESGALDSGGILGSNSENVPEERDPQFDAMLGQMVGRIKSKPGGKLEMGEAA

Query:  VVERYERPMPKLRNTDVKSSRYEDRPAPPGTLNVAQMRHVIQLHEGKAEDHNGTMAVQQIAQRYNVSVTQIHTILQFLSLPPEDTLRAKNK
        VVERY+RPMP+LRNTD+KSS+YEDRPAPPGTLNVAQMRH++ LHEGKAEDH+G M V QIA+RYNV V QI TILQFLSLPPED+LR K K
Subjt:  VVERYERPMPKLRNTDVKSSRYEDRPAPPGTLNVAQMRHVIQLHEGKAEDHNGTMAVQQIAQRYNVSVTQIHTILQFLSLPPEDTLRAKNK

A0A6J1L288 uncharacterized protein LOC1114991801.3e-7982.2Show/hide
Query:  MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRKPPPRAIQKAEVPQPRESGALDSGGILGSNSENVPEERDPQFDAMLGQMVGRIKSKPGGKLEMGEAA
        MGQAFRRAAGRIKPASSIDS+ASSLKMESVVDRKPPPRA +KA     RESG+LDSG +LGSNS NV EERDPQFDAML QM GRI+SKPGGKLEMGEA+
Subjt:  MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRKPPPRAIQKAEVPQPRESGALDSGGILGSNSENVPEERDPQFDAMLGQMVGRIKSKPGGKLEMGEAA

Query:  VVERYERPMPKLRNTDVKSSRYEDRPAPPGTLNVAQMRHVIQLHEGKAEDHNGTMAVQQIAQRYNVSVTQIHTILQFLSLPPEDTLRAKNK
        VVERY RPMPKLRNTD+KSS+YEDRPAPPGTLNVAQMRH+I LHEGKA+DH+G M V QIA+RYNV V+QI TILQFLSLPPED+LR K K
Subjt:  VVERYERPMPKLRNTDVKSSRYEDRPAPPGTLNVAQMRHVIQLHEGKAEDHNGTMAVQQIAQRYNVSVTQIHTILQFLSLPPEDTLRAKNK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G21400.1 unknown protein1.6e-4248.7Show/hide
Query:  MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRKPPPRAIQKAEVPQPRESGALDSGGILG--SNSENVPEERDPQFDAMLGQMVGRIKSKPGGKLEMGE
        MGQ  RRA G+IK       +  S      +DR+  P     A    P  + A+D     G  ++ +NV EERDP++D ML QMVGRIK+KPGGK EMGE
Subjt:  MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRKPPPRAIQKAEVPQPRESGALDSGGILG--SNSENVPEERDPQFDAMLGQMVGRIKSKPGGKLEMGE

Query:  AAVVERYERPMPKLRNTDVKSSRYEDRPAPPGTLNVAQMRHVIQLHEGKAEDHNGTMAVQQIAQRYNVSVTQIHTILQFLSLPPEDTLRAKNK
        A+VVE  +RP+PKLRNT  +S+RYE+ P P GTLNVAQ+RH++ L +GK++DH+G M V +IA++Y + V+Q+  I QFLSLP E T + K +
Subjt:  AAVVERYERPMPKLRNTDVKSSRYEDRPAPPGTLNVAQMRHVIQLHEGKAEDHNGTMAVQQIAQRYNVSVTQIHTILQFLSLPPEDTLRAKNK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACAGGCATTTCGTCGAGCGGCTGGAAGAATCAAACCTGCTTCGAGCATCGATTCCACCGCCTCTTCGTTGAAAATGGAGAGCGTCGTCGATCGGAAGCCTCCGCC
GCGTGCGATCCAGAAGGCTGAGGTGCCGCAGCCTCGAGAGAGCGGCGCCCTTGATTCAGGTGGTATCTTGGGAAGTAACTCTGAAAATGTGCCCGAAGAACGAGACCCTC
AGTTCGACGCCATGCTTGGCCAAATGGTGGGCCGAATTAAATCCAAACCTGGAGGAAAACTTGAGATGGGGGAGGCGGCTGTGGTGGAGAGATATGAGAGGCCAATGCCG
AAGCTGCGGAATACAGATGTAAAATCGAGTAGATACGAAGATCGGCCAGCTCCACCAGGAACTCTAAACGTAGCTCAGATGCGCCACGTGATTCAACTGCATGAAGGAAA
GGCTGAGGATCACAATGGGACAATGGCCGTTCAACAAATTGCTCAAAGGTATAATGTTAGTGTTACACAAATACACACCATTTTGCAGTTTCTGTCTCTGCCTCCTGAGG
ACACTCTTAGAGCCAAAAACAAGGATCCTAAT
mRNA sequenceShow/hide mRNA sequence
ATGGGACAGGCATTTCGTCGAGCGGCTGGAAGAATCAAACCTGCTTCGAGCATCGATTCCACCGCCTCTTCGTTGAAAATGGAGAGCGTCGTCGATCGGAAGCCTCCGCC
GCGTGCGATCCAGAAGGCTGAGGTGCCGCAGCCTCGAGAGAGCGGCGCCCTTGATTCAGGTGGTATCTTGGGAAGTAACTCTGAAAATGTGCCCGAAGAACGAGACCCTC
AGTTCGACGCCATGCTTGGCCAAATGGTGGGCCGAATTAAATCCAAACCTGGAGGAAAACTTGAGATGGGGGAGGCGGCTGTGGTGGAGAGATATGAGAGGCCAATGCCG
AAGCTGCGGAATACAGATGTAAAATCGAGTAGATACGAAGATCGGCCAGCTCCACCAGGAACTCTAAACGTAGCTCAGATGCGCCACGTGATTCAACTGCATGAAGGAAA
GGCTGAGGATCACAATGGGACAATGGCCGTTCAACAAATTGCTCAAAGGTATAATGTTAGTGTTACACAAATACACACCATTTTGCAGTTTCTGTCTCTGCCTCCTGAGG
ACACTCTTAGAGCCAAAAACAAGGATCCTAAT
Protein sequenceShow/hide protein sequence
MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRKPPPRAIQKAEVPQPRESGALDSGGILGSNSENVPEERDPQFDAMLGQMVGRIKSKPGGKLEMGEAAVVERYERPMP
KLRNTDVKSSRYEDRPAPPGTLNVAQMRHVIQLHEGKAEDHNGTMAVQQIAQRYNVSVTQIHTILQFLSLPPEDTLRAKNKDPN