; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS019285 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019285
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein RALF-like 33
Genome locationscaffold611:69925..70299
RNA-Seq ExpressionMS019285
SyntenyMS019285
Gene Ontology termsGO:0019722 - calcium-mediated signaling (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022138421.1 protein RALF-like 33 [Momordica charantia]7.8e-6198.4Show/hide
Query:  MEISRVSSLLAAFAIFAAHLLLSSAMAADFSGDHKLLYVPAKSECRGSIAECLLAGDDSGFGTEFEMDSEINRRILATTRYISYGALKRNSVPCSRRGAS
        MEISRVSSLLAAFAIFAAHLLLSSA AADFSGDHKLLYVPAKSECRGSIAECLLAGDDSGFGTEFEMDSEINRRILAT RYISYGALKRNSVPCSRRGAS
Subjt:  MEISRVSSLLAAFAIFAAHLLLSSAMAADFSGDHKLLYVPAKSECRGSIAECLLAGDDSGFGTEFEMDSEINRRILATTRYISYGALKRNSVPCSRRGAS

Query:  YYNCQPGAQANPYNRGCSAITRCRS
        YYNCQPGAQANPYNRGCSAITRCRS
Subjt:  YYNCQPGAQANPYNRGCSAITRCRS

XP_023000591.1 protein RALF-like 33 [Cucurbita maxima]6.2e-5083.46Show/hide
Query:  MEISRVSSLLAAFAIFAAHLLLSSAMAADFSGDHKLLYVPAKSECRGSIAECLLAGD--DSGFGTEFEMDSEINRRILATTRYISYGALKRNSVPCSRRG
        MEISRV S LAA AI AAH LLSSAM  DFSGD KLL+VPA+S+CRGSIAEC LAGD  DS FG EFEMDSEINRRILA +RY+SYGALKRNSVPCSRRG
Subjt:  MEISRVSSLLAAFAIFAAHLLLSSAMAADFSGDHKLLYVPAKSECRGSIAECLLAGD--DSGFGTEFEMDSEINRRILATTRYISYGALKRNSVPCSRRG

Query:  ASYYNCQPGAQANPYNRGCSAITRCRS
        ASYYNCQPGAQANPY RGC+AITRCRS
Subjt:  ASYYNCQPGAQANPYNRGCSAITRCRS

XP_023006467.1 protein RALF-like 33 [Cucurbita maxima]3.6e-5081.1Show/hide
Query:  MEISRVSSLLAAFAIFAAHLLLSSAMAADFSGDHKLLYVPAKSECRGSIAECLLAG--DDSGFGTEFEMDSEINRRILATTRYISYGALKRNSVPCSRRG
        M ISRVS+L+AAFA+ AAH L+SSA A DFSGD+++L+ P KSECRGSI EC LAG  DDSGFG EFEMDSEINRRILATTRYISYGAL+RN+VPCSRRG
Subjt:  MEISRVSSLLAAFAIFAAHLLLSSAMAADFSGDHKLLYVPAKSECRGSIAECLLAG--DDSGFGTEFEMDSEINRRILATTRYISYGALKRNSVPCSRRG

Query:  ASYYNCQPGAQANPYNRGCSAITRCRS
        ASYYNC+PGAQANPY RGCSAITRCRS
Subjt:  ASYYNCQPGAQANPYNRGCSAITRCRS

XP_023547686.1 protein RALF-like 33 [Cucurbita pepo subsp. pepo]3.6e-5081.1Show/hide
Query:  MEISRVSSLLAAFAIFAAHLLLSSAMAADFSGDHKLLYVPAKSECRGSIAECLLAG--DDSGFGTEFEMDSEINRRILATTRYISYGALKRNSVPCSRRG
        M ISRVS+L+AAF + AAH L+SSA A DFSGD+++L+ P KSECRGSIAEC LAG  DDSGFG EFEMDSEINRRILATTRYISYGAL+RN+VPCSRRG
Subjt:  MEISRVSSLLAAFAIFAAHLLLSSAMAADFSGDHKLLYVPAKSECRGSIAECLLAG--DDSGFGTEFEMDSEINRRILATTRYISYGALKRNSVPCSRRG

Query:  ASYYNCQPGAQANPYNRGCSAITRCRS
        ASYYNC+PGAQANPY RGCSAITRCRS
Subjt:  ASYYNCQPGAQANPYNRGCSAITRCRS

XP_038875155.1 protein RALF-like 33 [Benincasa hispida]9.6e-5184.25Show/hide
Query:  MEISRVSSLLAAFAIFAAHLLLSSAMAADFSGDHKLLYVPAKSECRGSIAECLLAG--DDSGFGTEFEMDSEINRRILATTRYISYGALKRNSVPCSRRG
        M ISRVSSLLAA AI AAH L+SSA A DFSGDHKLL+VP KSECRGSIAEC LAG  DDS FG EF MDSEINRRILATTRYISYGAL+RN+VPCSRRG
Subjt:  MEISRVSSLLAAFAIFAAHLLLSSAMAADFSGDHKLLYVPAKSECRGSIAECLLAG--DDSGFGTEFEMDSEINRRILATTRYISYGALKRNSVPCSRRG

Query:  ASYYNCQPGAQANPYNRGCSAITRCRS
        ASYYNC+PGAQANPY RGC+AITRCRS
Subjt:  ASYYNCQPGAQANPYNRGCSAITRCRS

TrEMBL top hitse value%identityAlignment
A0A6J1C9N4 protein RALF-like 333.8e-6198.4Show/hide
Query:  MEISRVSSLLAAFAIFAAHLLLSSAMAADFSGDHKLLYVPAKSECRGSIAECLLAGDDSGFGTEFEMDSEINRRILATTRYISYGALKRNSVPCSRRGAS
        MEISRVSSLLAAFAIFAAHLLLSSA AADFSGDHKLLYVPAKSECRGSIAECLLAGDDSGFGTEFEMDSEINRRILAT RYISYGALKRNSVPCSRRGAS
Subjt:  MEISRVSSLLAAFAIFAAHLLLSSAMAADFSGDHKLLYVPAKSECRGSIAECLLAGDDSGFGTEFEMDSEINRRILATTRYISYGALKRNSVPCSRRGAS

Query:  YYNCQPGAQANPYNRGCSAITRCRS
        YYNCQPGAQANPYNRGCSAITRCRS
Subjt:  YYNCQPGAQANPYNRGCSAITRCRS

A0A6J1EV64 protein RALF-like 335.1e-5083.46Show/hide
Query:  MEISRVSSLLAAFAIFAAHLLLSSAMAADFSGDHKLLYVPAKSECRGSIAECLLAGD--DSGFGTEFEMDSEINRRILATTRYISYGALKRNSVPCSRRG
        MEISRV S LAA AI AAH LLSSAMA DFSG  KLL+VPA+S+CRGSIAEC LAGD  DS FG EFEMDSEINRRILA++RY+SYGALKRNSVPCSRRG
Subjt:  MEISRVSSLLAAFAIFAAHLLLSSAMAADFSGDHKLLYVPAKSECRGSIAECLLAGD--DSGFGTEFEMDSEINRRILATTRYISYGALKRNSVPCSRRG

Query:  ASYYNCQPGAQANPYNRGCSAITRCRS
        ASYYNCQPGAQANPY RGC+AITRCRS
Subjt:  ASYYNCQPGAQANPYNRGCSAITRCRS

A0A6J1H3W7 protein RALF-like 333.0e-5081.1Show/hide
Query:  MEISRVSSLLAAFAIFAAHLLLSSAMAADFSGDHKLLYVPAKSECRGSIAECLLAG--DDSGFGTEFEMDSEINRRILATTRYISYGALKRNSVPCSRRG
        M ISRVS+L+AAFA+ AAH L+ SA A DFSGD+++L+ P KSECRGSIAEC LAG  DDSGFG EFEMDSEINRRILATTRYISYGAL+RN+VPCSRRG
Subjt:  MEISRVSSLLAAFAIFAAHLLLSSAMAADFSGDHKLLYVPAKSECRGSIAECLLAG--DDSGFGTEFEMDSEINRRILATTRYISYGALKRNSVPCSRRG

Query:  ASYYNCQPGAQANPYNRGCSAITRCRS
        ASYYNC+PGAQANPY RGCSAITRCRS
Subjt:  ASYYNCQPGAQANPYNRGCSAITRCRS

A0A6J1KG89 protein RALF-like 333.0e-5083.46Show/hide
Query:  MEISRVSSLLAAFAIFAAHLLLSSAMAADFSGDHKLLYVPAKSECRGSIAECLLAGD--DSGFGTEFEMDSEINRRILATTRYISYGALKRNSVPCSRRG
        MEISRV S LAA AI AAH LLSSAM  DFSGD KLL+VPA+S+CRGSIAEC LAGD  DS FG EFEMDSEINRRILA +RY+SYGALKRNSVPCSRRG
Subjt:  MEISRVSSLLAAFAIFAAHLLLSSAMAADFSGDHKLLYVPAKSECRGSIAECLLAGD--DSGFGTEFEMDSEINRRILATTRYISYGALKRNSVPCSRRG

Query:  ASYYNCQPGAQANPYNRGCSAITRCRS
        ASYYNCQPGAQANPY RGC+AITRCRS
Subjt:  ASYYNCQPGAQANPYNRGCSAITRCRS

A0A6J1KVY0 protein RALF-like 331.8e-5081.1Show/hide
Query:  MEISRVSSLLAAFAIFAAHLLLSSAMAADFSGDHKLLYVPAKSECRGSIAECLLAG--DDSGFGTEFEMDSEINRRILATTRYISYGALKRNSVPCSRRG
        M ISRVS+L+AAFA+ AAH L+SSA A DFSGD+++L+ P KSECRGSI EC LAG  DDSGFG EFEMDSEINRRILATTRYISYGAL+RN+VPCSRRG
Subjt:  MEISRVSSLLAAFAIFAAHLLLSSAMAADFSGDHKLLYVPAKSECRGSIAECLLAG--DDSGFGTEFEMDSEINRRILATTRYISYGALKRNSVPCSRRG

Query:  ASYYNCQPGAQANPYNRGCSAITRCRS
        ASYYNC+PGAQANPY RGCSAITRCRS
Subjt:  ASYYNCQPGAQANPYNRGCSAITRCRS

SwissProt top hitse value%identityAlignment
Q8L9P8 Protein RALF-like 331.2e-3265.77Show/hide
Query:  AIFAAHLLLSSAMAADFSGDHKLLYVPAKSECRGSIAECLLAGDDSGFGTEFEMDSEINRRILATTRYISYGALKRNSVPCSRRGASYYNCQPGAQANPY
        AI   H L  +A+ +  SGD    +VP +S+C G+IAEC L+  +     EFEMDSEINRRILATT+YISYGAL+RN+VPCSRRGASYYNC+ GAQANPY
Subjt:  AIFAAHLLLSSAMAADFSGDHKLLYVPAKSECRGSIAECLLAGDDSGFGTEFEMDSEINRRILATTRYISYGALKRNSVPCSRRGASYYNCQPGAQANPY

Query:  NRGCSAITRCR
        +RGCSAITRCR
Subjt:  NRGCSAITRCR

Q945T0 Rapid alkalinization factor2.8e-2965.38Show/hide
Query:  SAMAADFSGDHKLLYVPAKS--ECRGSIAECLLAGDDSGFGTEFEMDSEINRRILATTRYISYGALKRNSVPCSRRGASYYNCQPGAQANPYNRGCSAIT
        S  AA  SG +  + +PA+S   C+GSI EC+   +      EFE+DSE NRRILAT +YISYGAL++NSVPCSRRGASYYNC+PGAQANPY+RGCSAIT
Subjt:  SAMAADFSGDHKLLYVPAKS--ECRGSIAECLLAGDDSGFGTEFEMDSEINRRILATTRYISYGALKRNSVPCSRRGASYYNCQPGAQANPYNRGCSAIT

Query:  RCRS
        RCRS
Subjt:  RCRS

Q9LUS7 Rapid alkalinization factor 237.9e-3257.66Show/hide
Query:  ISRVSSLLAAFA---IFAAH--LLLSSAMAADFSGDHKLLYVPAKSECRGSIAECLLAG--DDSG--------FGTEFEMDSEINRRILATTRYISYGAL
        +SR S   A FA   I A H   +  S+ + +F+GD    + P ++ECRG+IAEC ++    D G         G EFEMDSEINRRILAT RYISYGAL
Subjt:  ISRVSSLLAAFA---IFAAH--LLLSSAMAADFSGDHKLLYVPAKSECRGSIAECLLAG--DDSG--------FGTEFEMDSEINRRILATTRYISYGAL

Query:  KRNSVPCSRRGASYYNCQPGAQANPYNRGCSAITRCR
        +RN++PCSRRGASYYNC+ GAQANPY+RGCSAITRCR
Subjt:  KRNSVPCSRRGASYYNCQPGAQANPYNRGCSAITRCR

Q9MA62 Protein RALF-like 226.5e-2654.62Show/hide
Query:  AAFAIFAAHLLLSSAMAADFSGDHKLLYVPAKSE-----CRGSIAECLLAGDDSGFGTEFEMDSEINRRILATTRYISYGALKRNSVPCSRRGASYYNCQ
        A +A+ A   ++ SA+ +       L +V A S      C GSIAEC+   +      E E DS+I+RRILA  +YISYGA++RNSVPCSRRGASYYNCQ
Subjt:  AAFAIFAAHLLLSSAMAADFSGDHKLLYVPAKSE-----CRGSIAECLLAGDDSGFGTEFEMDSEINRRILATTRYISYGALKRNSVPCSRRGASYYNCQ

Query:  PGAQANPYNRGCSAITRCR
         GAQANPY+RGCS ITRCR
Subjt:  PGAQANPYNRGCSAITRCR

Q9SRY3 Protein RALF-like 16.9e-2874.7Show/hide
Query:  SECRGSIAECLLAGDDSGFGTEFEMDSEINRRILATTRYISYGALKRNSVPCSRRGASYYNCQPGAQANPYNRGCSAITRCRS
        S C GSIAEC+ A ++       EMDSEINRRILATT+YISY +LKRNSVPCSRRGASYYNCQ GAQANPY+RGCS I RCRS
Subjt:  SECRGSIAECLLAGDDSGFGTEFEMDSEINRRILATTRYISYGALKRNSVPCSRRGASYYNCQPGAQANPYNRGCSAITRCRS

Arabidopsis top hitse value%identityAlignment
AT1G02900.1 rapid alkalinization factor 14.9e-2974.7Show/hide
Query:  SECRGSIAECLLAGDDSGFGTEFEMDSEINRRILATTRYISYGALKRNSVPCSRRGASYYNCQPGAQANPYNRGCSAITRCRS
        S C GSIAEC+ A ++       EMDSEINRRILATT+YISY +LKRNSVPCSRRGASYYNCQ GAQANPY+RGCS I RCRS
Subjt:  SECRGSIAECLLAGDDSGFGTEFEMDSEINRRILATTRYISYGALKRNSVPCSRRGASYYNCQPGAQANPYNRGCSAITRCRS

AT2G33775.1 ralf-like 193.3e-1765.57Show/hide
Query:  EFEMDSEINRRILATTR-YISYGALKRNSVPCSRRGASYYNCQPGAQANPYNRGCSAITRC
        ++ MDSE NRR LA  R YISYGAL++N+VPCSRRG SYY+C+   +ANPY RGCS IT C
Subjt:  EFEMDSEINRRILATTR-YISYGALKRNSVPCSRRGASYYNCQPGAQANPYNRGCSAITRC

AT3G05490.1 ralf-like 224.6e-2754.62Show/hide
Query:  AAFAIFAAHLLLSSAMAADFSGDHKLLYVPAKSE-----CRGSIAECLLAGDDSGFGTEFEMDSEINRRILATTRYISYGALKRNSVPCSRRGASYYNCQ
        A +A+ A   ++ SA+ +       L +V A S      C GSIAEC+   +      E E DS+I+RRILA  +YISYGA++RNSVPCSRRGASYYNCQ
Subjt:  AAFAIFAAHLLLSSAMAADFSGDHKLLYVPAKSE-----CRGSIAECLLAGDDSGFGTEFEMDSEINRRILATTRYISYGALKRNSVPCSRRGASYYNCQ

Query:  PGAQANPYNRGCSAITRCR
         GAQANPY+RGCS ITRCR
Subjt:  PGAQANPYNRGCSAITRCR

AT3G16570.1 rapid alkalinization factor 235.6e-3357.66Show/hide
Query:  ISRVSSLLAAFA---IFAAH--LLLSSAMAADFSGDHKLLYVPAKSECRGSIAECLLAG--DDSG--------FGTEFEMDSEINRRILATTRYISYGAL
        +SR S   A FA   I A H   +  S+ + +F+GD    + P ++ECRG+IAEC ++    D G         G EFEMDSEINRRILAT RYISYGAL
Subjt:  ISRVSSLLAAFA---IFAAH--LLLSSAMAADFSGDHKLLYVPAKSECRGSIAECLLAG--DDSG--------FGTEFEMDSEINRRILATTRYISYGAL

Query:  KRNSVPCSRRGASYYNCQPGAQANPYNRGCSAITRCR
        +RN++PCSRRGASYYNC+ GAQANPY+RGCSAITRCR
Subjt:  KRNSVPCSRRGASYYNCQPGAQANPYNRGCSAITRCR

AT4G15800.1 ralf-like 338.7e-3465.77Show/hide
Query:  AIFAAHLLLSSAMAADFSGDHKLLYVPAKSECRGSIAECLLAGDDSGFGTEFEMDSEINRRILATTRYISYGALKRNSVPCSRRGASYYNCQPGAQANPY
        AI   H L  +A+ +  SGD    +VP +S+C G+IAEC L+  +     EFEMDSEINRRILATT+YISYGAL+RN+VPCSRRGASYYNC+ GAQANPY
Subjt:  AIFAAHLLLSSAMAADFSGDHKLLYVPAKSECRGSIAECLLAGDDSGFGTEFEMDSEINRRILATTRYISYGALKRNSVPCSRRGASYYNCQPGAQANPY

Query:  NRGCSAITRCR
        +RGCSAITRCR
Subjt:  NRGCSAITRCR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAATCTCACGCGTCTCTTCTCTCCTCGCGGCGTTCGCCATTTTCGCCGCTCATCTTCTGCTCTCATCGGCGATGGCCGCTGATTTCTCCGGCGACCACAAGCTCCT
CTACGTGCCGGCGAAATCGGAGTGCCGAGGCTCAATTGCCGAGTGCCTGCTCGCCGGAGACGATTCCGGCTTCGGAACGGAGTTCGAGATGGACTCGGAGATCAATCGGC
GAATTCTAGCGACTACGCGGTACATCAGCTACGGCGCGCTGAAGAGGAACAGCGTTCCTTGCTCCCGTCGCGGCGCGTCTTACTACAACTGCCAGCCCGGAGCTCAGGCG
AATCCTTACAACCGCGGTTGCAGCGCAATTACTCGCTGCCGGAGC
mRNA sequenceShow/hide mRNA sequence
ATGGAAATCTCACGCGTCTCTTCTCTCCTCGCGGCGTTCGCCATTTTCGCCGCTCATCTTCTGCTCTCATCGGCGATGGCCGCTGATTTCTCCGGCGACCACAAGCTCCT
CTACGTGCCGGCGAAATCGGAGTGCCGAGGCTCAATTGCCGAGTGCCTGCTCGCCGGAGACGATTCCGGCTTCGGAACGGAGTTCGAGATGGACTCGGAGATCAATCGGC
GAATTCTAGCGACTACGCGGTACATCAGCTACGGCGCGCTGAAGAGGAACAGCGTTCCTTGCTCCCGTCGCGGCGCGTCTTACTACAACTGCCAGCCCGGAGCTCAGGCG
AATCCTTACAACCGCGGTTGCAGCGCAATTACTCGCTGCCGGAGC
Protein sequenceShow/hide protein sequence
MEISRVSSLLAAFAIFAAHLLLSSAMAADFSGDHKLLYVPAKSECRGSIAECLLAGDDSGFGTEFEMDSEINRRILATTRYISYGALKRNSVPCSRRGASYYNCQPGAQA
NPYNRGCSAITRCRS