CuGenDBv2

Gene ID	MS019308
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	glycine-rich protein
Genome location	scaffold611:266713..267306
RNA-Seq Expression	MS019308
Synteny	MS019308
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008458406.1 PREDICTED: uncharacterized protein LOC103497828 [Cucumis melo]

7.7e-87

87.5

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Query:  MDSSLVAGTLSMAANNGLGFAKFLNRLDFVSNYCVSASDSITEQIPPSSAAGALQLSAALFPVATIAPPPVKSISRRSASRTFLRRKRRTKRRLYSDDSE
        MDSSLVAGTLSM ANN +GFAK LNRLDFVSNYC+SA+DSIT+QIP SS A +L+LSAALFPVATIAPPPVKS+S RSASRTFLRRKRRTKRRLYSDDSE
Subjt:  MDSSLVAGTLSMAANNGLGFAKFLNRLDFVSNYCVSASDSITEQIPPSSAAGALQLSAALFPVATIAPPPVKSISRRSASRTFLRRKRRTKRRLYSDDSE

Query:  GGEDDGFGGDNFDGSYG--GGGGGSGRGWNFDRFGGNDWDESSSSSSPSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAADAIGNSERGKLSMRLISVC
        G EDDGFGG +FDG YG  GGGGG GRGWNFDRFGGNDWDESS SSS SNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAA+A GNSERGKLSMRLISVC
Subjt:  GGEDDGFGGDNFDGSYG--GGGGGSGRGWNFDRFGGNDWDESSSSSSPSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAADAIGNSERGKLSMRLISVC

XP_011657286.1 uncharacterized protein LOC105435841 [Cucumis sativus]

5.9e-87

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Query:  MDSSLVAGTLSMAANNGLGFAKFLNRLDFVSNYCVSASDSITEQIPPSSAAGALQLSAALFPVATIAPPPVKSISRRSASRTFLRRKRRTKRRLYSDDSE
        MDSSLVAGTLSM ANN +GFAK LNRLDFVSNYC+S +DSIT+QIPPSS A AL+LSAALFPVATIAPPPVKS+S RSASRTFLRRKRRTKRRLYSDDSE
Subjt:  MDSSLVAGTLSMAANNGLGFAKFLNRLDFVSNYCVSASDSITEQIPPSSAAGALQLSAALFPVATIAPPPVKSISRRSASRTFLRRKRRTKRRLYSDDSE

Query:  GGEDDGFGGDNFDGSYGGGGGGS--GRGWNFDRFGGNDWDESSSSSSPSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAADAIGNSERGKLSMRLISVC
        G EDDGFGG +FDG  GG GGGS  GRGWNFDRFGGNDWDESSSSSS SNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAA+AIGNSERGKL+MRLISVC
Subjt:  GGEDDGFGGDNFDGSYGGGGGGS--GRGWNFDRFGGNDWDESSSSSSPSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAADAIGNSERGKLSMRLISVC

XP_022138602.1 uncharacterized protein LOC111009719 [Momordica charantia]

9.4e-101

100

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Query:  MDSSLVAGTLSMAANNGLGFAKFLNRLDFVSNYCVSASDSITEQIPPSSAAGALQLSAALFPVATIAPPPVKSISRRSASRTFLRRKRRTKRRLYSDDSE
        MDSSLVAGTLSMAANNGLGFAKFLNRLDFVSNYCVSASDSITEQIPPSSAAGALQLSAALFPVATIAPPPVKSISRRSASRTFLRRKRRTKRRLYSDDSE
Subjt:  MDSSLVAGTLSMAANNGLGFAKFLNRLDFVSNYCVSASDSITEQIPPSSAAGALQLSAALFPVATIAPPPVKSISRRSASRTFLRRKRRTKRRLYSDDSE

Query:  GGEDDGFGGDNFDGSYGGGGGGSGRGWNFDRFGGNDWDESSSSSSPSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAADAIGNSERGKLSMRLISVC
        GGEDDGFGGDNFDGSYGGGGGGSGRGWNFDRFGGNDWDESSSSSSPSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAADAIGNSERGKLSMRLISVC
Subjt:  GGEDDGFGGDNFDGSYGGGGGGSGRGWNFDRFGGNDWDESSSSSSPSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAADAIGNSERGKLSMRLISVC

XP_023513728.1 uncharacterized protein LOC111778252 [Cucurbita pepo subsp. pepo]

2.3e-83

86.87

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Query:  MDSSLVAGTLSMAANNGLGFAKFLNRLDFVSNYCVSASDSITEQIPPSSAAGALQLSAALFPVATIAPPPVKSISRRSASRTFLRRKRRTKRRLYSDDSE
        MD+SLVAGTLSM ANNG+GFAKFLNRLDFVSNY +S +DSI +QI P SAAGALQLSAALFPVATIAPPPVKSISRRSASRTFLRRKRRTKRRLYSDDSE
Subjt:  MDSSLVAGTLSMAANNGLGFAKFLNRLDFVSNYCVSASDSITEQIPPSSAAGALQLSAALFPVATIAPPPVKSISRRSASRTFLRRKRRTKRRLYSDDSE

Query:  GGEDDGFGGDNFDGSYGGGGGGSGRGWNFDRFGGNDWDESSSSSSPSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAADAIGNSERGKLSMRLISVC
        GGE +GFGG +FDGSYGGGGG  G GWNFDRFGG+DWDESSSSS  SNPAYYFVYEVV WIALSNCVHFAFKKV+RFA +AI NSERGKLSMRLISVC
Subjt:  GGEDDGFGGDNFDGSYGGGGGGSGRGWNFDRFGGNDWDESSSSSSPSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAADAIGNSERGKLSMRLISVC

XP_038874866.1 uncharacterized protein LOC120067363 [Benincasa hispida]

4.5e-87

87.44

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Query:  MDSSLVAGTLSMAANNGLGFAKFLNRLDFVSNYCVSASDSITEQIPPSSAAGALQLSAALFPVATIAPPPVKSISRRSASRTFLRRKRRTKRRLYSDDSE
        MDSSLVAGTLSM ANNG+GFAKFLNRLDFVSNYC+SA+DS+T+QI PSSAAGALQLSAALFP+ATIAPPPVKS+S RSASRTFLRRKRRTKRRLYS DSE
Subjt:  MDSSLVAGTLSMAANNGLGFAKFLNRLDFVSNYCVSASDSITEQIPPSSAAGALQLSAALFPVATIAPPPVKSISRRSASRTFLRRKRRTKRRLYSDDSE

Query:  GGEDDGFGGDNFDGSYGG-GGGGSGRGWNFDRFGGNDWDESSSSSSPSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAADAIGNSERGKLSMRLISVC
        G EDDGF G +FDG YGG G  G GRGWNFDRFGGNDWDESSSSSS SNPAYYFVYEVVCWIALSNCVHFAFKKVVRFA +A+GNSERGK+SMRLISVC
Subjt:  GGEDDGFGGDNFDGSYGG-GGGGSGRGWNFDRFGGNDWDESSSSSSPSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAADAIGNSERGKLSMRLISVC

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KG90 Uncharacterized protein

2.9e-87

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Query:  MDSSLVAGTLSMAANNGLGFAKFLNRLDFVSNYCVSASDSITEQIPPSSAAGALQLSAALFPVATIAPPPVKSISRRSASRTFLRRKRRTKRRLYSDDSE
        MDSSLVAGTLSM ANN +GFAK LNRLDFVSNYC+S +DSIT+QIPPSS A AL+LSAALFPVATIAPPPVKS+S RSASRTFLRRKRRTKRRLYSDDSE
Subjt:  MDSSLVAGTLSMAANNGLGFAKFLNRLDFVSNYCVSASDSITEQIPPSSAAGALQLSAALFPVATIAPPPVKSISRRSASRTFLRRKRRTKRRLYSDDSE

Query:  GGEDDGFGGDNFDGSYGGGGGGS--GRGWNFDRFGGNDWDESSSSSSPSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAADAIGNSERGKLSMRLISVC
        G EDDGFGG +FDG  GG GGGS  GRGWNFDRFGGNDWDESSSSSS SNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAA+AIGNSERGKL+MRLISVC
Subjt:  GGEDDGFGGDNFDGSYGGGGGGS--GRGWNFDRFGGNDWDESSSSSSPSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAADAIGNSERGKLSMRLISVC

A0A1S3C7S8 uncharacterized protein LOC103497828

3.7e-87

87.5

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Query:  MDSSLVAGTLSMAANNGLGFAKFLNRLDFVSNYCVSASDSITEQIPPSSAAGALQLSAALFPVATIAPPPVKSISRRSASRTFLRRKRRTKRRLYSDDSE
        MDSSLVAGTLSM ANN +GFAK LNRLDFVSNYC+SA+DSIT+QIP SS A +L+LSAALFPVATIAPPPVKS+S RSASRTFLRRKRRTKRRLYSDDSE
Subjt:  MDSSLVAGTLSMAANNGLGFAKFLNRLDFVSNYCVSASDSITEQIPPSSAAGALQLSAALFPVATIAPPPVKSISRRSASRTFLRRKRRTKRRLYSDDSE

Query:  GGEDDGFGGDNFDGSYG--GGGGGSGRGWNFDRFGGNDWDESSSSSSPSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAADAIGNSERGKLSMRLISVC
        G EDDGFGG +FDG YG  GGGGG GRGWNFDRFGGNDWDESS SSS SNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAA+A GNSERGKLSMRLISVC
Subjt:  GGEDDGFGGDNFDGSYG--GGGGGSGRGWNFDRFGGNDWDESSSSSSPSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAADAIGNSERGKLSMRLISVC

A0A6J1CBL0 uncharacterized protein LOC111009719

4.5e-101

100

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Query:  MDSSLVAGTLSMAANNGLGFAKFLNRLDFVSNYCVSASDSITEQIPPSSAAGALQLSAALFPVATIAPPPVKSISRRSASRTFLRRKRRTKRRLYSDDSE
        MDSSLVAGTLSMAANNGLGFAKFLNRLDFVSNYCVSASDSITEQIPPSSAAGALQLSAALFPVATIAPPPVKSISRRSASRTFLRRKRRTKRRLYSDDSE
Subjt:  MDSSLVAGTLSMAANNGLGFAKFLNRLDFVSNYCVSASDSITEQIPPSSAAGALQLSAALFPVATIAPPPVKSISRRSASRTFLRRKRRTKRRLYSDDSE

Query:  GGEDDGFGGDNFDGSYGGGGGGSGRGWNFDRFGGNDWDESSSSSSPSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAADAIGNSERGKLSMRLISVC
        GGEDDGFGGDNFDGSYGGGGGGSGRGWNFDRFGGNDWDESSSSSSPSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAADAIGNSERGKLSMRLISVC
Subjt:  GGEDDGFGGDNFDGSYGGGGGGSGRGWNFDRFGGNDWDESSSSSSPSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAADAIGNSERGKLSMRLISVC

A0A6J1EWH7 uncharacterized protein LOC111436769

1.2e-82

85.86

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Query:  MDSSLVAGTLSMAANNGLGFAKFLNRLDFVSNYCVSASDSITEQIPPSSAAGALQLSAALFPVATIAPPPVKSISRRSASRTFLRRKRRTKRRLYSDDSE
        MD+SLVAGTLSM ANNG+GFAKFLNR DFVSNY +SA+DSI +QI P SAAGALQLSAALFPVATIAPPPVKSISRRSASRTFLRRKRRTKRRLYSDDSE
Subjt:  MDSSLVAGTLSMAANNGLGFAKFLNRLDFVSNYCVSASDSITEQIPPSSAAGALQLSAALFPVATIAPPPVKSISRRSASRTFLRRKRRTKRRLYSDDSE

Query:  GGEDDGFGGDNFDGSYGGGGGGSGRGWNFDRFGGNDWDESSSSSSPSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAADAIGNSERGKLSMRLISVC
        GGE +GFGG +FDGSYGGGGG  G GWNFDRFGG+DW+ES SSS  SNPAYYFVYEVV WIALSNCVHFAFKKV+RFA +AI NSERGKLSMRLISVC
Subjt:  GGEDDGFGGDNFDGSYGGGGGGSGRGWNFDRFGGNDWDESSSSSSPSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAADAIGNSERGKLSMRLISVC

A0A6J1KZI4 uncharacterized protein LOC111499005

7.3e-83

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Query:  MDSSLVAGTLSMAANNGLGFAKFLNRLDFVSNYCVSASDSITEQIPPSSAAGALQLSAALFPVATIAPPPVKSISRRSASRTFLRRKRRTKRRLY-SDDS
        MD+SLVAGTLS+ ANNG+GFAKFLNRLD +SNY +SA+DSIT+QIPPSSAAGALQLS ALFPVATIAPPPVKSIS RS+SRTFLRRKRRTKRRLY SDDS
Subjt:  MDSSLVAGTLSMAANNGLGFAKFLNRLDFVSNYCVSASDSITEQIPPSSAAGALQLSAALFPVATIAPPPVKSISRRSASRTFLRRKRRTKRRLY-SDDS

Query:  EGGEDDGFGGDNFDGSYGG-GGGGSGRGWNFDRFGGNDWDESSSSSSPSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAADAIGNSERGKLSMRLISVC
        EGGED+GF   +FDG YGG GGGG GRGWNFDRFGGNDWDESSSSS+  NPAYYFVYEVVCWIALSNCVHFAFKKVVRFAA+AIGNSER KL MRLISVC
Subjt:  EGGEDDGFGGDNFDGSYGG-GGGGSGRGWNFDRFGGNDWDESSSSSSPSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAADAIGNSERGKLSMRLISVC

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G06780.1 glycine-rich protein

6.0e-29

44.34

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Query:  MDSSLVAGTLSM-AANNGLGFAK-FLNRLDFVSNYCVSASDSITEQIPPSSAAGALQLSAALFPVATIAPPPVKSISRRSASRTFLRRKRRTKRRLYSDD
        M+ SL+A T+++  A  G+ F K  L RLD  ++  +S +DS+ +   P    G +Q SA +FPV  IAPPPV+S S ++  R  +R+KRRT+R  +  D
Subjt:  MDSSLVAGTLSM-AANNGLGFAK-FLNRLDFVSNYCVSASDSITEQIPPSSAAGALQLSAALFPVATIAPPPVKSISRRSASRTFLRRKRRTKRRLYSDD

Query:  SEGGEDDG-------FGGDNFDGSYGGGGG-GSGRGWNF----DRFGGNDWDESSSSSSPSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAADAIGNSE
         +   D G       FGG +    +GGGG  G G+GWN+      FG ++WD  SS SS S+PA  FVYEV+CWIALSNCVHFAFK++VR   D     E
Subjt:  SEGGEDDG-------FGGDNFDGSYGGGGG-GSGRGWNF----DRFGGNDWDESSSSSSPSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAADAIGNSE

Query:  RGKLSMRLISVC
        R KL++ L  VC
Subjt:  RGKLSMRLISVC

Sequences

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CDS sequence

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ATGGATTCCTCTCTGGTCGCTGGAACGCTTTCGATGGCAGCCAACAATGGCCTCGGCTTTGCCAAATTCCTCAATCGCCTCGATTTCGTATCGAACTACTGCGTCTCTGC
CTCCGATTCAATCACCGAGCAGATTCCACCATCTTCTGCCGCCGGAGCCCTTCAATTATCGGCCGCACTGTTCCCCGTCGCTACCATTGCTCCACCGCCTGTCAAATCGA
TTTCTCGCCGATCGGCCTCTCGGACGTTCCTCCGGAGAAAGCGTCGTACGAAGCGTAGATTATACAGCGATGACTCCGAGGGCGGCGAGGACGACGGATTCGGCGGCGAT
AATTTCGACGGATCGTACGGCGGAGGCGGCGGCGGGAGTGGTAGGGGTTGGAATTTCGACAGATTTGGGGGCAATGATTGGGACGAATCATCATCGTCTTCCTCTCCTTC
CAATCCCGCGTACTATTTTGTTTACGAGGTGGTTTGCTGGATCGCGCTCTCGAACTGCGTGCATTTTGCGTTCAAGAAGGTTGTTAGATTTGCAGCTGATGCAATTGGGA
ACTCCGAAAGGGGAAAATTGTCCATGAGATTAATCTCGGTTTGT

mRNA sequence

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Protein sequence

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MDSSLVAGTLSMAANNGLGFAKFLNRLDFVSNYCVSASDSITEQIPPSSAAGALQLSAALFPVATIAPPPVKSISRRSASRTFLRRKRRTKRRLYSDDSEGGEDDGFGGD
NFDGSYGGGGGGSGRGWNFDRFGGNDWDESSSSSSPSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAADAIGNSERGKLSMRLISVC

MS019308 (gene) of Bitter gourd (TR) v1 genome