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MS019321 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019321
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionzinc finger protein 5-like
Genome locationscaffold611:357646..358002
RNA-Seq ExpressionMS019321
SyntenyMS019321
Gene Ontology termsGO:0009736 - cytokinin-activated signaling pathway (biological process)
GO:0009740 - gibberellic acid mediated signaling pathway (biological process)
GO:0010090 - trichome morphogenesis (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily
IPR044299 - Zinc finger protein GIS3/ZFP5/ZFP6


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593997.1 Zinc finger protein 6, partial [Cucurbita argyrosperma subsp. sororia]2.3e-3061.36Show/hide
Query:  MKLFGFSVTAGAGEGNVRDAAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDSNNHRRQQNKHPRFLSSTLPPA----------A
        MKLFGFSVT  A +     A  A  NKD+KRFECQFCGR+FANSQALGGHQNAHKRER LAKQLRFD        NKHPRF ++T PP+          A
Subjt:  MKLFGFSVTAGAGEGNVRDAAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDSNNHRRQQNKHPRFLSSTLPPA----------A

Query:  PPPLA----DEMYGDNGVDLHLTLAPSSGIFC
        PP  A     E+ G+NGVDLHL+LAPSS IFC
Subjt:  PPPLA----DEMYGDNGVDLHLTLAPSSGIFC

KGN47401.1 hypothetical protein Csa_022997 [Cucumis sativus]1.4e-1950.68Show/hide
Query:  VMKLFGFSVTAGAGEGNVRDAAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDSNNHRRQQNKHPR-FLSSTLPPA---------
        +MKLFGFSVTA     +      A      KRFECQFCGR+FANSQALGGHQNAHKRER LAKQL         Q  KH R FL+ST P +         
Subjt:  VMKLFGFSVTAGAGEGNVRDAAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDSNNHRRQQNKHPR-FLSSTLPPA---------

Query:  APPPLADEMYG------------------DNGVDLHLTLAPSSG-IFC
        APPP     YG                   NGVDLHL+LAPSSG IFC
Subjt:  APPPLADEMYG------------------DNGVDLHLTLAPSSG-IFC

XP_022138610.1 zinc finger protein 5-like [Momordica charantia]9.7e-61100Show/hide
Query:  MKLFGFSVTAGAGEGNVRDAAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDSNNHRRQQNKHPRFLSSTLPPAAPPPLADEMYG
        MKLFGFSVTAGAGEGNVRDAAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDSNNHRRQQNKHPRFLSSTLPPAAPPPLADEMYG
Subjt:  MKLFGFSVTAGAGEGNVRDAAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDSNNHRRQQNKHPRFLSSTLPPAAPPPLADEMYG

Query:  DNGVDLHLTLAPSSGIFC
        DNGVDLHLTLAPSSGIFC
Subjt:  DNGVDLHLTLAPSSGIFC

XP_022930487.1 zinc finger protein 6-like [Cucurbita moschata]6.1e-3162.6Show/hide
Query:  MKLFGFSVTAGAGEGNVRDAAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDSNNHRRQQNKHPRFLSSTLPPA----------A
        MKLFGFSVT  A +     A  A  NKD+KRFECQFCGR+FANSQALGGHQNAHKRER LAKQLRFD        NKHPRF +ST PP+          A
Subjt:  MKLFGFSVTAGAGEGNVRDAAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDSNNHRRQQNKHPRFLSSTLPPA----------A

Query:  PPPLA---DEMYGDNGVDLHLTLAPSSGIFC
        PP  A    E+ G+NGVDLHL+LAPSS IFC
Subjt:  PPPLA---DEMYGDNGVDLHLTLAPSSGIFC

XP_023514440.1 zinc finger protein 6-like [Cucurbita pepo subsp. pepo]8.0e-3162.12Show/hide
Query:  MKLFGFSVTAGAGEGNVRDAAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDSNNHRRQQNKHPRFLSSTLPPA----------A
        MKLFGFSVT  A +     A  A  NKD+KRFECQFCGR+FANSQALGGHQNAHKRER LAKQLRFD        NKHPRF +ST PP+          A
Subjt:  MKLFGFSVTAGAGEGNVRDAAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDSNNHRRQQNKHPRFLSSTLPPA----------A

Query:  PPPLA----DEMYGDNGVDLHLTLAPSSGIFC
        PP  A     E+ G+NGVDLHL+LAPSS IFC
Subjt:  PPPLA----DEMYGDNGVDLHLTLAPSSGIFC

TrEMBL top hitse value%identityAlignment
A0A0A0KI02 C2H2-type domain-containing protein6.9e-2050.68Show/hide
Query:  VMKLFGFSVTAGAGEGNVRDAAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDSNNHRRQQNKHPR-FLSSTLPPA---------
        +MKLFGFSVTA     +      A      KRFECQFCGR+FANSQALGGHQNAHKRER LAKQL         Q  KH R FL+ST P +         
Subjt:  VMKLFGFSVTAGAGEGNVRDAAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDSNNHRRQQNKHPR-FLSSTLPPA---------

Query:  APPPLADEMYG------------------DNGVDLHLTLAPSSG-IFC
        APPP     YG                   NGVDLHL+LAPSSG IFC
Subjt:  APPPLADEMYG------------------DNGVDLHLTLAPSSG-IFC

A0A5D3BTX6 Zinc finger protein 6-like3.8e-1847.83Show/hide
Query:  VMKLFGFSVTAGAGEGNVRDAAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDSNNHRRQQNKHPRFLSSTLPPA---------A
        +MKLFGFSVTA            A     +KRFECQFCGR+FANSQALGGHQNAHKRER LAKQL            KH R   ++ PP+         A
Subjt:  VMKLFGFSVTAGAGEGNVRDAAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDSNNHRRQQNKHPRFLSSTLPPA---------A

Query:  PPPL--------------ADEMYGDNGVDLHLTLAPSS
        PPP                D     NGVDLHL+LAPSS
Subjt:  PPPL--------------ADEMYGDNGVDLHLTLAPSS

A0A6J1C9X8 zinc finger protein 5-like4.7e-61100Show/hide
Query:  MKLFGFSVTAGAGEGNVRDAAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDSNNHRRQQNKHPRFLSSTLPPAAPPPLADEMYG
        MKLFGFSVTAGAGEGNVRDAAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDSNNHRRQQNKHPRFLSSTLPPAAPPPLADEMYG
Subjt:  MKLFGFSVTAGAGEGNVRDAAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDSNNHRRQQNKHPRFLSSTLPPAAPPPLADEMYG

Query:  DNGVDLHLTLAPSSGIFC
        DNGVDLHLTLAPSSGIFC
Subjt:  DNGVDLHLTLAPSSGIFC

A0A6J1EQN3 zinc finger protein 6-like3.0e-3162.6Show/hide
Query:  MKLFGFSVTAGAGEGNVRDAAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDSNNHRRQQNKHPRFLSSTLPPA----------A
        MKLFGFSVT  A +     A  A  NKD+KRFECQFCGR+FANSQALGGHQNAHKRER LAKQLRFD        NKHPRF +ST PP+          A
Subjt:  MKLFGFSVTAGAGEGNVRDAAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDSNNHRRQQNKHPRFLSSTLPPA----------A

Query:  PPPLA---DEMYGDNGVDLHLTLAPSSGIFC
        PP  A    E+ G+NGVDLHL+LAPSS IFC
Subjt:  PPPLA---DEMYGDNGVDLHLTLAPSSGIFC

A0A6J1KF91 zinc finger protein 6-like3.0e-3162.6Show/hide
Query:  MKLFGFSVTAGAGEGNVRDAAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDSNNHRRQQNKHPRFLSSTLPPA----------A
        MKLFGFSVT  A +     A  A  NKD+KRFECQFCGR+FANSQALGGHQNAHKRER LAKQLRFD        NKHPRF +ST PP+          A
Subjt:  MKLFGFSVTAGAGEGNVRDAAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDSNNHRRQQNKHPRFLSSTLPPA----------A

Query:  PPPLA---DEMYGDNGVDLHLTLAPSSGIFC
        PP  A    E+ G+NGVDLHL+LAPSS IFC
Subjt:  PPPLA---DEMYGDNGVDLHLTLAPSSGIFC

SwissProt top hitse value%identityAlignment
P93751 Zinc finger protein 81.7e-0750.88Show/hide
Query:  RDAAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDSNNHRRQ
        +D    + N + +RFEC +C R+F  SQALGGHQNAHKRER  AK+    S  H  Q
Subjt:  RDAAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDSNNHRRQ

Q39264 Zinc finger protein 54.7e-1044.59Show/hide
Query:  MKLFGFSVTAGAGEGNVRDAAAARANKDE------KRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDS
        +KLFGF + +G+    +  A +  ++ +       KR ECQ+CG++FANSQALGGHQNAHK+ER   K+L+  +
Subjt:  MKLFGFSVTAGAGEGNVRDAAAARANKDE------KRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDS

Q39265 Zinc finger protein 61.8e-0935.9Show/hide
Query:  MKLFGFSV--TAGAGEGNVRDAAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLR-FDSNNHRRQQNKHPRFLSSTLPPAAPPPLADE
        +KLFG ++  T      +      + +  + +++ECQ+C R+FANSQALGGHQNAHK+ER L K+ +   +    R  N HP   +  L   AP P    
Subjt:  MKLFGFSV--TAGAGEGNVRDAAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLR-FDSNNHRRQQNKHPRFLSSTLPPAAPPPLADE

Query:  MYGDNGVDLHLTLAPSS
        +        H+ L+PSS
Subjt:  MYGDNGVDLHLTLAPSS

Q84WI0 Zinc finger protein GIS2.9e-0773.53Show/hide
Query:  KRFECQFCGRDFANSQALGGHQNAHKRERHLAKQ
        +RFEC +C R+F  SQALGGHQNAHKRER LAK+
Subjt:  KRFECQFCGRDFANSQALGGHQNAHKRERHLAKQ

Q9FG05 Zinc finger protein GIS29.0e-0944.05Show/hide
Query:  MKLFGFSVTAGAGEGNVRD-----AAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDSNN---HRRQQN
        ++LFGF   A   E   +D       + + +  EKRF+C +C R+F  SQALGGHQNAHKRER   K+    SN      RQQN
Subjt:  MKLFGFSVTAGAGEGNVRD-----AAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDSNN---HRRQQN

Arabidopsis top hitse value%identityAlignment
AT1G10480.1 zinc finger protein 53.4e-1144.59Show/hide
Query:  MKLFGFSVTAGAGEGNVRDAAAARANKDE------KRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDS
        +KLFGF + +G+    +  A +  ++ +       KR ECQ+CG++FANSQALGGHQNAHK+ER   K+L+  +
Subjt:  MKLFGFSVTAGAGEGNVRDAAAARANKDE------KRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDS

AT1G67030.1 zinc finger protein 61.3e-1035.9Show/hide
Query:  MKLFGFSV--TAGAGEGNVRDAAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLR-FDSNNHRRQQNKHPRFLSSTLPPAAPPPLADE
        +KLFG ++  T      +      + +  + +++ECQ+C R+FANSQALGGHQNAHK+ER L K+ +   +    R  N HP   +  L   AP P    
Subjt:  MKLFGFSV--TAGAGEGNVRDAAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLR-FDSNNHRRQQNKHPRFLSSTLPPAAPPPLADE

Query:  MYGDNGVDLHLTLAPSS
        +        H+ L+PSS
Subjt:  MYGDNGVDLHLTLAPSS

AT2G41940.1 zinc finger protein 81.2e-0850.88Show/hide
Query:  RDAAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDSNNHRRQ
        +D    + N + +RFEC +C R+F  SQALGGHQNAHKRER  AK+    S  H  Q
Subjt:  RDAAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDSNNHRRQ

AT3G58070.1 C2H2 and C2HC zinc fingers superfamily protein2.0e-0873.53Show/hide
Query:  KRFECQFCGRDFANSQALGGHQNAHKRERHLAKQ
        +RFEC +C R+F  SQALGGHQNAHKRER LAK+
Subjt:  KRFECQFCGRDFANSQALGGHQNAHKRERHLAKQ

AT5G06650.1 C2H2 and C2HC zinc fingers superfamily protein6.4e-1044.05Show/hide
Query:  MKLFGFSVTAGAGEGNVRD-----AAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDSNN---HRRQQN
        ++LFGF   A   E   +D       + + +  EKRF+C +C R+F  SQALGGHQNAHKRER   K+    SN      RQQN
Subjt:  MKLFGFSVTAGAGEGNVRD-----AAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDSNN---HRRQQN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTGATGAAGCTGTTCGGTTTTTCAGTGACGGCTGGAGCTGGTGAGGGAAACGTGCGAGACGCGGCTGCGGCACGTGCGAACAAGGACGAGAAGAGATTTGAGTGCCAGTT
CTGCGGCCGCGACTTCGCCAACTCCCAAGCCCTCGGCGGCCACCAAAACGCCCACAAGCGCGAGCGCCACCTCGCCAAACAACTCCGCTTCGACTCCAATAACCACCGCC
GCCAACAAAACAAACACCCACGTTTTCTCTCCTCCACCCTCCCGCCCGCCGCCCCGCCGCCGCTCGCCGACGAAATGTACGGAGATAACGGCGTTGATCTCCACCTCACT
TTGGCACCCTCCTCCGGGATCTTCTGT
mRNA sequenceShow/hide mRNA sequence
GTGATGAAGCTGTTCGGTTTTTCAGTGACGGCTGGAGCTGGTGAGGGAAACGTGCGAGACGCGGCTGCGGCACGTGCGAACAAGGACGAGAAGAGATTTGAGTGCCAGTT
CTGCGGCCGCGACTTCGCCAACTCCCAAGCCCTCGGCGGCCACCAAAACGCCCACAAGCGCGAGCGCCACCTCGCCAAACAACTCCGCTTCGACTCCAATAACCACCGCC
GCCAACAAAACAAACACCCACGTTTTCTCTCCTCCACCCTCCCGCCCGCCGCCCCGCCGCCGCTCGCCGACGAAATGTACGGAGATAACGGCGTTGATCTCCACCTCACT
TTGGCACCCTCCTCCGGGATCTTCTGT
Protein sequenceShow/hide protein sequence
VMKLFGFSVTAGAGEGNVRDAAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDSNNHRRQQNKHPRFLSSTLPPAAPPPLADEMYGDNGVDLHLT
LAPSSGIFC