; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS019326 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019326
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionGlycine-rich protein family
Genome locationscaffold611:385845..387644
RNA-Seq ExpressionMS019326
SyntenyMS019326
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008458378.1 PREDICTED: uncharacterized protein LOC103497804 [Cucumis melo]2.9e-6974.86Show/hide
Query:  MALMLLPFARIPISAVVVFYLLSSSYFYGNGDDVEGEGATSGSVGYEDPPKIVAKALLCFNDKYIYRACEESCRLKESGNVEVPVEKTDEFCNGPCLGET
        MAL  L +AR+P+SA+++FYLL+   FYG  DD E  G+T GSVG+EDPP+IVAKALLCFND+YIY ACEES RLKESGN+EVP+EKT+E+CNGPCL ET
Subjt:  MALMLLPFARIPISAVVVFYLLSSSYFYGNGDDVEGEGATSGSVGYEDPPKIVAKALLCFNDKYIYRACEESCRLKESGNVEVPVEKTDEFCNGPCLGET

Query:  HLVLDCINAIFTNFLFYNRATLQDVRDTIQAGCAYGPQRGRNFDVTEHIRAERGKACRASNNAVLGFSFIILGFFCSLL
         LVLDCIN IF+NFLFYNRATLQDVRDTI AGC YGPQRG NFDV EHI AERG ACRASN A LGFSF ILG F  LL
Subjt:  HLVLDCINAIFTNFLFYNRATLQDVRDTIQAGCAYGPQRGRNFDVTEHIRAERGKACRASNNAVLGFSFIILGFFCSLL

XP_022138327.1 uncharacterized protein LOC111009540 isoform X1 [Momordica charantia]4.1e-7990.62Show/hide
Query:  YLLSSSYFYGNGDDVEGEGATSGSVGYEDPPKIVAKALLCFNDKYIYRACEESCRLKESGNVEVPVEKTDEFCNGPCLGETHLVLDCINAIFTNFLFYNR
        + ++     G GDDVEG+GATSGS+GYEDPP+IVAKALLCFNDKYIYRACEESCRLKESGNVEVPVEKTDEFCNGPCLGETHLVLDCINAIFTNFLFYNR
Subjt:  YLLSSSYFYGNGDDVEGEGATSGSVGYEDPPKIVAKALLCFNDKYIYRACEESCRLKESGNVEVPVEKTDEFCNGPCLGETHLVLDCINAIFTNFLFYNR

Query:  ATLQDVRDTIQAGCAYGPQRGRNFDVTEHIRAERGKACRASNNAVLGFSFIILGFFCSLL
        ATLQDVRDTIQAGCAYGPQRG NFDVT+HIRAERGKACRASNNAVLGFSFIILGFFCSLL
Subjt:  ATLQDVRDTIQAGCAYGPQRGRNFDVTEHIRAERGKACRASNNAVLGFSFIILGFFCSLL

XP_023000051.1 uncharacterized protein LOC111494359 [Cucurbita maxima]2.2e-6976.54Show/hide
Query:  MALMLLPFARIPISAVVVFYLLSSSYFYGNGDDVEGEGATSGSVGYEDPPKIVAKALLCFNDKYIYRACEESCRLKESGNVEVPVEKTDEFCNGPCLGET
        MAL+  PF RI ISAV VFYLL+S Y YG GDD EG  A+SG VGYEDPP+IVAKAL CFNDKYIY ACEES RLK SGNVEVP+E+T+E+CNGPCLGET
Subjt:  MALMLLPFARIPISAVVVFYLLSSSYFYGNGDDVEGEGATSGSVGYEDPPKIVAKALLCFNDKYIYRACEESCRLKESGNVEVPVEKTDEFCNGPCLGET

Query:  HLVLDCINAIFTNFLFYNRATLQDVRDTIQAGCAYGPQRGRNFDVTEHIRAERGKACRASNNAVLGFSFIILGFFCSLL
        HLVLDCI+ IF+NFLFYN+ATLQDVRDTI AGC YGPQRG NFDV EHIRAE  KA RASN  V+GFSFIILG F   L
Subjt:  HLVLDCINAIFTNFLFYNRATLQDVRDTIQAGCAYGPQRGRNFDVTEHIRAERGKACRASNNAVLGFSFIILGFFCSLL

XP_023514279.1 uncharacterized protein LOC111778597 [Cucurbita pepo subsp. pepo]5.9e-7076.54Show/hide
Query:  MALMLLPFARIPISAVVVFYLLSSSYFYGNGDDVEGEGATSGSVGYEDPPKIVAKALLCFNDKYIYRACEESCRLKESGNVEVPVEKTDEFCNGPCLGET
        M L+  PF RI ISAV +FYLL+SSY YG GDD EG  A+SG VGYEDPP+IVAKALLCFNDKYIY ACEES RLK SGNVEVP+E+T+E+CNGPCLGET
Subjt:  MALMLLPFARIPISAVVVFYLLSSSYFYGNGDDVEGEGATSGSVGYEDPPKIVAKALLCFNDKYIYRACEESCRLKESGNVEVPVEKTDEFCNGPCLGET

Query:  HLVLDCINAIFTNFLFYNRATLQDVRDTIQAGCAYGPQRGRNFDVTEHIRAERGKACRASNNAVLGFSFIILGFFCSLL
        HLVLDCI+ IF+NFLFYN+ATLQDVRDTI AGC YGPQRG NFDV EHIRAE GKA RASN  V+GFSFIIL  F   L
Subjt:  HLVLDCINAIFTNFLFYNRATLQDVRDTIQAGCAYGPQRGRNFDVTEHIRAERGKACRASNNAVLGFSFIILGFFCSLL

XP_038906636.1 uncharacterized protein LOC120092583 [Benincasa hispida]2.2e-6974.86Show/hide
Query:  MALMLLPFARIPISAVVVFYLLSSSYFYGNGDDVEGEGATSGSVGYEDPPKIVAKALLCFNDKYIYRACEESCRLKESGNVEVPVEKTDEFCNGPCLGET
        MA++ L FARIPISA+++ YLL+   FYG  DD E  G+T  SVG+ DPP+IVAKALLCFND+YIY ACEESCRLKESGN+EVP EKT+E+CNGPCL ET
Subjt:  MALMLLPFARIPISAVVVFYLLSSSYFYGNGDDVEGEGATSGSVGYEDPPKIVAKALLCFNDKYIYRACEESCRLKESGNVEVPVEKTDEFCNGPCLGET

Query:  HLVLDCINAIFTNFLFYNRATLQDVRDTIQAGCAYGPQRGRNFDVTEHIRAERGKACRASNNAVLGFSFIILGFFCSLL
        HLVLDCIN IF+NFLFYNRATLQDVRDTIQAGC YGPQRG NFDV EHI+AERG ACRASN AVLGF   I G F  LL
Subjt:  HLVLDCINAIFTNFLFYNRATLQDVRDTIQAGCAYGPQRGRNFDVTEHIRAERGKACRASNNAVLGFSFIILGFFCSLL

TrEMBL top hitse value%identityAlignment
A0A0A0KCE5 Uncharacterized protein2.8e-6572.07Show/hide
Query:  MALMLLPFARIPISAVVVFYLLSSSYFYGNGDDVEGEGATSGSVGYEDPPKIVAKALLCFNDKYIYRACEESCRLKESGNVEVPVEKTDEFCNGPCLGET
        MAL  L FAR+P+SA+++FYLL+    YG  DD E  G+T  SVG+EDPP+IVAKALLCFND+YIY ACEES RLKESGN+EVP+EKT+E+CNGPCL ET
Subjt:  MALMLLPFARIPISAVVVFYLLSSSYFYGNGDDVEGEGATSGSVGYEDPPKIVAKALLCFNDKYIYRACEESCRLKESGNVEVPVEKTDEFCNGPCLGET

Query:  HLVLDCINAIFTNFLFYNRATLQDVRDTIQAGCAYGPQRGRNFDVTEHIRAERGKACRASNNAVLGFSFIILGFFCSLL
         LVLDCI+ IF+NFLFYNRATLQDVRDT+ AGC YGPQRG NFDV EHI AERG ACRASN A LGFSF IL     LL
Subjt:  HLVLDCINAIFTNFLFYNRATLQDVRDTIQAGCAYGPQRGRNFDVTEHIRAERGKACRASNNAVLGFSFIILGFFCSLL

A0A1S3C8B8 uncharacterized protein LOC1034978041.4e-6974.86Show/hide
Query:  MALMLLPFARIPISAVVVFYLLSSSYFYGNGDDVEGEGATSGSVGYEDPPKIVAKALLCFNDKYIYRACEESCRLKESGNVEVPVEKTDEFCNGPCLGET
        MAL  L +AR+P+SA+++FYLL+   FYG  DD E  G+T GSVG+EDPP+IVAKALLCFND+YIY ACEES RLKESGN+EVP+EKT+E+CNGPCL ET
Subjt:  MALMLLPFARIPISAVVVFYLLSSSYFYGNGDDVEGEGATSGSVGYEDPPKIVAKALLCFNDKYIYRACEESCRLKESGNVEVPVEKTDEFCNGPCLGET

Query:  HLVLDCINAIFTNFLFYNRATLQDVRDTIQAGCAYGPQRGRNFDVTEHIRAERGKACRASNNAVLGFSFIILGFFCSLL
         LVLDCIN IF+NFLFYNRATLQDVRDTI AGC YGPQRG NFDV EHI AERG ACRASN A LGFSF ILG F  LL
Subjt:  HLVLDCINAIFTNFLFYNRATLQDVRDTIQAGCAYGPQRGRNFDVTEHIRAERGKACRASNNAVLGFSFIILGFFCSLL

A0A6J1CAS9 uncharacterized protein LOC111009540 isoform X12.0e-7990.62Show/hide
Query:  YLLSSSYFYGNGDDVEGEGATSGSVGYEDPPKIVAKALLCFNDKYIYRACEESCRLKESGNVEVPVEKTDEFCNGPCLGETHLVLDCINAIFTNFLFYNR
        + ++     G GDDVEG+GATSGS+GYEDPP+IVAKALLCFNDKYIYRACEESCRLKESGNVEVPVEKTDEFCNGPCLGETHLVLDCINAIFTNFLFYNR
Subjt:  YLLSSSYFYGNGDDVEGEGATSGSVGYEDPPKIVAKALLCFNDKYIYRACEESCRLKESGNVEVPVEKTDEFCNGPCLGETHLVLDCINAIFTNFLFYNR

Query:  ATLQDVRDTIQAGCAYGPQRGRNFDVTEHIRAERGKACRASNNAVLGFSFIILGFFCSLL
        ATLQDVRDTIQAGCAYGPQRG NFDVT+HIRAERGKACRASNNAVLGFSFIILGFFCSLL
Subjt:  ATLQDVRDTIQAGCAYGPQRGRNFDVTEHIRAERGKACRASNNAVLGFSFIILGFFCSLL

A0A6J1EX17 uncharacterized protein LOC1114369373.5e-6875.42Show/hide
Query:  MALMLLPFARIPISAVVVFYLLSSSYFYGNGDDVEGEGATSGSVGYEDPPKIVAKALLCFNDKYIYRACEESCRLKESGNVEVPVEKTDEFCNGPCLGET
        MAL+  PF R+ ISAV VFYLL+S Y  G GDD EG  A+SG VGYEDPP+IVAKAL CFNDKYIY ACEES RLK SGNVEVP+EKT+E+C+GPCLGET
Subjt:  MALMLLPFARIPISAVVVFYLLSSSYFYGNGDDVEGEGATSGSVGYEDPPKIVAKALLCFNDKYIYRACEESCRLKESGNVEVPVEKTDEFCNGPCLGET

Query:  HLVLDCINAIFTNFLFYNRATLQDVRDTIQAGCAYGPQRGRNFDVTEHIRAERGKACRASNNAVLGFSFIILGFFCSLL
        HLVLDCI+ IF+NFLFYN+ATLQDVRDTI AGC YGPQRG NFDV EHIRAE  KA RASN  V+GFSFIILG F   L
Subjt:  HLVLDCINAIFTNFLFYNRATLQDVRDTIQAGCAYGPQRGRNFDVTEHIRAERGKACRASNNAVLGFSFIILGFFCSLL

A0A6J1KET4 uncharacterized protein LOC1114943591.1e-6976.54Show/hide
Query:  MALMLLPFARIPISAVVVFYLLSSSYFYGNGDDVEGEGATSGSVGYEDPPKIVAKALLCFNDKYIYRACEESCRLKESGNVEVPVEKTDEFCNGPCLGET
        MAL+  PF RI ISAV VFYLL+S Y YG GDD EG  A+SG VGYEDPP+IVAKAL CFNDKYIY ACEES RLK SGNVEVP+E+T+E+CNGPCLGET
Subjt:  MALMLLPFARIPISAVVVFYLLSSSYFYGNGDDVEGEGATSGSVGYEDPPKIVAKALLCFNDKYIYRACEESCRLKESGNVEVPVEKTDEFCNGPCLGET

Query:  HLVLDCINAIFTNFLFYNRATLQDVRDTIQAGCAYGPQRGRNFDVTEHIRAERGKACRASNNAVLGFSFIILGFFCSLL
        HLVLDCI+ IF+NFLFYN+ATLQDVRDTI AGC YGPQRG NFDV EHIRAE  KA RASN  V+GFSFIILG F   L
Subjt:  HLVLDCINAIFTNFLFYNRATLQDVRDTIQAGCAYGPQRGRNFDVTEHIRAERGKACRASNNAVLGFSFIILGFFCSLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G56320.1 BEST Arabidopsis thaliana protein match is: Glycine-rich protein family (TAIR:AT5G49350.2)4.7e-2544.35Show/hide
Query:  IVAKALLCFNDKYIYRACEESCRLKESGNVEVPVEKTDEFCNGPCLGETHLVLDCINAIFTNFLFYNRATLQDVRDTIQAGCAYGPQRGRNFDVTEHIRA
        +V +A  CFN+  +YR C E+ RL + G  +VP E+TD FCNGPC  ET LVL CIN++ ++F+FYNRAT +DVR+ ++ GC+    RG NF+V ++ + 
Subjt:  IVAKALLCFNDKYIYRACEESCRLKESGNVEVPVEKTDEFCNGPCLGETHLVLDCINAIFTNFLFYNRATLQDVRDTIQAGCAYGPQRGRNFDVTEHIRA

Query:  -ERGKACRASNNAVLGFSFIILGF
           GKA +        F  ++LGF
Subjt:  -ERGKACRASNNAVLGFSFIILGF

AT5G49350.1 Glycine-rich protein family1.7e-3548.95Show/hide
Query:  GNGDDVEGEGATSGSVGYEDPPKIVAKALLCFNDKYIYRACEESCRLKESGNVEVPVEKTDEFCNGPCLGETHLVLDCINAIFTNFLFYNRATLQDVRDT
        GNG    G G   G +G EDPP+IVAKAL C N+K+IYR C+ES RL  +G++ +P+ +T+EFC GPC  ETHL L+CI  I  ++ F+NRAT+ D+R+T
Subjt:  GNGDDVEGEGATSGSVGYEDPPKIVAKALLCFNDKYIYRACEESCRLKESGNVEVPVEKTDEFCNGPCLGETHLVLDCINAIFTNFLFYNRATLQDVRDT

Query:  IQAGCAYGPQRGRNFDVTEHIRAERGKACRASNNAVLGFSFII
        +++GC+YGP+RG  F+V EHI  E   A     +      FII
Subjt:  IQAGCAYGPQRGRNFDVTEHIRAERGKACRASNNAVLGFSFII

AT5G49350.2 Glycine-rich protein family1.7e-3548.95Show/hide
Query:  GNGDDVEGEGATSGSVGYEDPPKIVAKALLCFNDKYIYRACEESCRLKESGNVEVPVEKTDEFCNGPCLGETHLVLDCINAIFTNFLFYNRATLQDVRDT
        GNG    G G   G +G EDPP+IVAKAL C N+K+IYR C+ES RL  +G++ +P+ +T+EFC GPC  ETHL L+CI  I  ++ F+NRAT+ D+R+T
Subjt:  GNGDDVEGEGATSGSVGYEDPPKIVAKALLCFNDKYIYRACEESCRLKESGNVEVPVEKTDEFCNGPCLGETHLVLDCINAIFTNFLFYNRATLQDVRDT

Query:  IQAGCAYGPQRGRNFDVTEHIRAERGKACRASNNAVLGFSFII
        +++GC+YGP+RG  F+V EHI  E   A     +      FII
Subjt:  IQAGCAYGPQRGRNFDVTEHIRAERGKACRASNNAVLGFSFII


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCTCATGTTGTTGCCTTTTGCTAGAATCCCCATTTCTGCTGTTGTTGTCTTCTACCTCCTCAGTTCTTCCTATTTTTACGGTAATGGAGATGATGTCGAAGGCGA
AGGTGCAACGAGCGGTTCAGTTGGTTACGAGGACCCACCCAAGATTGTTGCCAAAGCATTGCTTTGCTTCAATGACAAATATATTTACAGGGCGTGTGAAGAATCGTGTA
GATTAAAGGAGAGTGGGAATGTGGAGGTCCCAGTGGAGAAAACGGACGAATTCTGCAATGGGCCGTGTTTGGGTGAAACACATTTAGTGCTTGATTGCATTAATGCCATT
TTTACCAATTTCTTGTTTTACAATAGGGCCACTTTGCAGGATGTTAGGGACACCATCCAGGCTGGATGTGCCTATGGCCCACAAAGAGGTCGAAACTTCGATGTTACAGA
GCATATAAGGGCTGAAAGAGGCAAAGCTTGCAGGGCTTCCAACAATGCAGTTCTTGGATTCAGCTTCATAATTTTAGGCTTTTTTTGTTCATTGCTT
mRNA sequenceShow/hide mRNA sequence
ATGGCTCTCATGTTGTTGCCTTTTGCTAGAATCCCCATTTCTGCTGTTGTTGTCTTCTACCTCCTCAGTTCTTCCTATTTTTACGGTAATGGAGATGATGTCGAAGGCGA
AGGTGCAACGAGCGGTTCAGTTGGTTACGAGGACCCACCCAAGATTGTTGCCAAAGCATTGCTTTGCTTCAATGACAAATATATTTACAGGGCGTGTGAAGAATCGTGTA
GATTAAAGGAGAGTGGGAATGTGGAGGTCCCAGTGGAGAAAACGGACGAATTCTGCAATGGGCCGTGTTTGGGTGAAACACATTTAGTGCTTGATTGCATTAATGCCATT
TTTACCAATTTCTTGTTTTACAATAGGGCCACTTTGCAGGATGTTAGGGACACCATCCAGGCTGGATGTGCCTATGGCCCACAAAGAGGTCGAAACTTCGATGTTACAGA
GCATATAAGGGCTGAAAGAGGCAAAGCTTGCAGGGCTTCCAACAATGCAGTTCTTGGATTCAGCTTCATAATTTTAGGCTTTTTTTGTTCATTGCTT
Protein sequenceShow/hide protein sequence
MALMLLPFARIPISAVVVFYLLSSSYFYGNGDDVEGEGATSGSVGYEDPPKIVAKALLCFNDKYIYRACEESCRLKESGNVEVPVEKTDEFCNGPCLGETHLVLDCINAI
FTNFLFYNRATLQDVRDTIQAGCAYGPQRGRNFDVTEHIRAERGKACRASNNAVLGFSFIILGFFCSLL