; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS019327 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019327
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionChromodomain helicase DNA binding protein
Genome locationscaffold611:410286..410441
RNA-Seq ExpressionMS019327
SyntenyMS019327
Gene Ontology termsGO:0016746 - transferase activity, transferring acyl groups (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143217.1 uncharacterized protein LOC101206451 isoform X1 [Cucumis sativus]3.9e-0653.85Show/hide
Query:  FLDWEFEFYGMCFDVNYQDAWSKGVIFGSQQRRMQRRILFLKFGDELEVGIE
        F  W+   YG+C DVNYQDAW +GVIF  +    +R++LF   GDEL VGIE
Subjt:  FLDWEFEFYGMCFDVNYQDAWSKGVIFGSQQRRMQRRILFLKFGDELEVGIE
XP_011657123.1 uncharacterized protein LOC101206451 isoform X3 [Cucumis sativus]3.9e-0653.85Show/hide
Query:  FLDWEFEFYGMCFDVNYQDAWSKGVIFGSQQRRMQRRILFLKFGDELEVGIE
        F  W+   YG+C DVNYQDAW +GVIF  +    +R++LF   GDEL VGIE
Subjt:  FLDWEFEFYGMCFDVNYQDAWSKGVIFGSQQRRMQRRILFLKFGDELEVGIE
XP_022148410.1 uncharacterized protein LOC111017066 isoform X1 [Momordica charantia]8.7e-0656.82Show/hide
Query:  YGMCFDVNYQDAWSKGVIFGSQQRRMQRRILFLKFGDELEVGIE
        YG+C DVNYQDAW +GVIF  +    +RR+ F   GDEL+VGI+
Subjt:  YGMCFDVNYQDAWSKGVIFGSQQRRMQRRILFLKFGDELEVGIE
XP_022148411.1 uncharacterized protein LOC111017066 isoform X2 [Momordica charantia]8.7e-0656.82Show/hide
Query:  YGMCFDVNYQDAWSKGVIFGSQQRRMQRRILFLKFGDELEVGIE
        YG+C DVNYQDAW +GVIF  +    +RR+ F   GDEL+VGI+
Subjt:  YGMCFDVNYQDAWSKGVIFGSQQRRMQRRILFLKFGDELEVGIE
XP_031743821.1 uncharacterized protein LOC101206451 isoform X2 [Cucumis sativus]3.9e-0653.85Show/hide
Query:  FLDWEFEFYGMCFDVNYQDAWSKGVIFGSQQRRMQRRILFLKFGDELEVGIE
        F  W+   YG+C DVNYQDAW +GVIF  +    +R++LF   GDEL VGIE
Subjt:  FLDWEFEFYGMCFDVNYQDAWSKGVIFGSQQRRMQRRILFLKFGDELEVGIE
TrEMBL top hitse value%identityAlignment
A0A0A0KC42 Uncharacterized protein1.9e-0653.85Show/hide
Query:  FLDWEFEFYGMCFDVNYQDAWSKGVIFGSQQRRMQRRILFLKFGDELEVGIE
        F  W+   YG+C DVNYQDAW +GVIF  +    +R++LF   GDEL VGIE
Subjt:  FLDWEFEFYGMCFDVNYQDAWSKGVIFGSQQRRMQRRILFLKFGDELEVGIE
A0A6J1D2U7 uncharacterized protein LOC111017066 isoform X14.2e-0656.82Show/hide
Query:  YGMCFDVNYQDAWSKGVIFGSQQRRMQRRILFLKFGDELEVGIE
        YG+C DVNYQDAW +GVIF  +    +RR+ F   GDEL+VGI+
Subjt:  YGMCFDVNYQDAWSKGVIFGSQQRRMQRRILFLKFGDELEVGIE
A0A6J1D5A7 uncharacterized protein LOC111017066 isoform X24.2e-0656.82Show/hide
Query:  YGMCFDVNYQDAWSKGVIFGSQQRRMQRRILFLKFGDELEVGIE
        YG+C DVNYQDAW +GVIF  +    +RR+ F   GDEL+VGI+
Subjt:  YGMCFDVNYQDAWSKGVIFGSQQRRMQRRILFLKFGDELEVGIE
A0A6J1G7J3 uncharacterized protein LOC111451473 isoform X12.1e-0556.82Show/hide
Query:  YGMCFDVNYQDAWSKGVIFGSQQRRMQRRILFLKFGDELEVGIE
        YG+C DV YQDAW +GV+F  +   ++RRI F   GDEL VGIE
Subjt:  YGMCFDVNYQDAWSKGVIFGSQQRRMQRRILFLKFGDELEVGIE
A0A6J1JAH1 uncharacterized protein LOC1114840262.1e-0558.14Show/hide
Query:  YGMCFDVNYQDAWSKGVIFGSQQRRMQRRILFLKFGDELEVGI
        YG C DVNYQDAW +GV+F  +    +RRI F   GDEL VGI
Subjt:  YGMCFDVNYQDAWSKGVIFGSQQRRMQRRILFLKFGDELEVGI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G58610.1 PHD finger transcription factor, putative5.4e-0640.91Show/hide
Query:  YGMCFDVNYQDAWSKGVIFGSQQRRMQRRILFLKFGDELEVGIE
        YG+C DV + DAW +GV+F  +    +RR+ F   GDEL+  ++
Subjt:  YGMCFDVNYQDAWSKGVIFGSQQRRMQRRILFLKFGDELEVGIE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTCCTCGATTGGGAATTCGAATTTTATGGGATGTGTTTTGATGTGAATTACCAGGATGCATGGTCGAAAGGTGTTATTTTTGGTTCACAACAGAGGAGGATGCAGAGGAG
GATTTTATTTCTGAAATTCGGTGATGAATTGGAGGTTGGAATTGAA
mRNA sequenceShow/hide mRNA sequence
TTCCTCGATTGGGAATTCGAATTTTATGGGATGTGTTTTGATGTGAATTACCAGGATGCATGGTCGAAAGGTGTTATTTTTGGTTCACAACAGAGGAGGATGCAGAGGAG
GATTTTATTTCTGAAATTCGGTGATGAATTGGAGGTTGGAATTGAA
Protein sequenceShow/hide protein sequence
FLDWEFEFYGMCFDVNYQDAWSKGVIFGSQQRRMQRRILFLKFGDELEVGIE