; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS019354 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019354
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein SINE3
Genome locationscaffold611:553055..554112
RNA-Seq ExpressionMS019354
SyntenyMS019354
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594019.1 hypothetical protein SDJN03_13495, partial [Cucurbita argyrosperma subsp. sororia]3.7e-7472.35Show/hide
Query:  MEKRMKEYQTPQRDPAANRRSRKPQKIAKSLAATFSSLSDDKVQPISMEDFSPIYEVSDINQVPDMDRSFLQVVNPALSASFESSFFPDLSPSSVVTAEN
        MEKR KEYQTP RD AANRRS+KP KI KSL ATFSS  DDK+QPIS EDFSPI  VS+I+Q+PD+D SFLQ VNPALS S ESS FP+LSPSSVVT +N
Subjt:  MEKRMKEYQTPQRDPAANRRSRKPQKIAKSLAATFSSLSDDKVQPISMEDFSPIYEVSDINQVPDMDRSFLQVVNPALSASFESSFFPDLSPSSVVTAEN

Query:  EQTDKIPVNFAGSNDLVKGSACSVEAEIAVDFLRRALSQLLQSTDVDHQSKKLLDASMRIIVEDFVAIPQEQDHIAQLISAKSLVLSLCFFLWIIILALA
        +Q DK+PVNF GSN+L + SA SVEAEIAV++LRRALSQ+LQSTDVDHQSKKL+DAS+RIIV++F+AIPQE+D I +LIS+KS VLSL  FLWII+L  A
Subjt:  EQTDKIPVNFAGSNDLVKGSACSVEAEIAVDFLRRALSQLLQSTDVDHQSKKLLDASMRIIVEDFVAIPQEQDHIAQLISAKSLVLSLCFFLWIIILALA

Query:  FFFGSGAKSSFSGPPPT
        FF GSG ++ F GP PT
Subjt:  FFFGSGAKSSFSGPPPT

XP_022138735.1 uncharacterized protein LOC111009828 [Momordica charantia]2.7e-10999.54Show/hide
Query:  MEKRMKEYQTPQRDPAANRRSRKPQKIAKSLAATFSSLSDDKVQPISMEDFSPIYEVSDINQVPDMDRSFLQVVNPALSASFESSFFPDLSPSSVVTAEN
        MEKRMKEYQTPQRDPAANRRSRKPQKIAKSLAATFSSLSDDKVQPISMEDFSPIYEVSDINQVPDMDRSFLQVVNPALSASFESSFFPDLSPSSVVTAEN
Subjt:  MEKRMKEYQTPQRDPAANRRSRKPQKIAKSLAATFSSLSDDKVQPISMEDFSPIYEVSDINQVPDMDRSFLQVVNPALSASFESSFFPDLSPSSVVTAEN

Query:  EQTDKIPVNFAGSNDLVKGSACSVEAEIAVDFLRRALSQLLQSTDVDHQSKKLLDASMRIIVEDFVAIPQEQDHIAQLISAKSLVLSLCFFLWIIILALA
        EQTDKIPVNFAGSNDLVKGSACSVEAEIAVDFLRRALSQ+LQSTDVDHQSKKLLDASMRIIVEDFVAIPQEQDHIAQLISAKSLVLSLCFFLWIIILALA
Subjt:  EQTDKIPVNFAGSNDLVKGSACSVEAEIAVDFLRRALSQLLQSTDVDHQSKKLLDASMRIIVEDFVAIPQEQDHIAQLISAKSLVLSLCFFLWIIILALA

Query:  FFFGSGAKSSFSGPPPT
        FFFGSGAKSSFSGPPPT
Subjt:  FFFGSGAKSSFSGPPPT

XP_022930352.1 uncharacterized protein LOC111436822 [Cucurbita moschata]6.3e-7472.35Show/hide
Query:  MEKRMKEYQTPQRDPAANRRSRKPQKIAKSLAATFSSLSDDKVQPISMEDFSPIYEVSDINQVPDMDRSFLQVVNPALSASFESSFFPDLSPSSVVTAEN
        MEKR KEYQTP RD AANRRS+KP KI KSL ATFSS  DDK+QPI  EDFSPI  VS+I+Q+PD+D SFLQ VNPALS S ESS FP+LSPSSVVT +N
Subjt:  MEKRMKEYQTPQRDPAANRRSRKPQKIAKSLAATFSSLSDDKVQPISMEDFSPIYEVSDINQVPDMDRSFLQVVNPALSASFESSFFPDLSPSSVVTAEN

Query:  EQTDKIPVNFAGSNDLVKGSACSVEAEIAVDFLRRALSQLLQSTDVDHQSKKLLDASMRIIVEDFVAIPQEQDHIAQLISAKSLVLSLCFFLWIIILALA
        +Q DK+PVNF GSN+L + SA SVEAEIAV++LRRALSQ+LQSTDVDHQSKKL+DAS+RIIV++F+AIPQE+D I +LIS+KS VLSL  FLWII+L LA
Subjt:  EQTDKIPVNFAGSNDLVKGSACSVEAEIAVDFLRRALSQLLQSTDVDHQSKKLLDASMRIIVEDFVAIPQEQDHIAQLISAKSLVLSLCFFLWIIILALA

Query:  FFFGSGAKSSFSGPPPT
        FF GSG ++ F GP PT
Subjt:  FFFGSGAKSSFSGPPPT

XP_022999957.1 uncharacterized protein LOC111494286 [Cucurbita maxima]9.0e-7371.89Show/hide
Query:  MEKRMKEYQTPQRDPAANRRSRKPQKIAKSLAATFSSLSDDKVQPISMEDFSPIYEVSDINQVPDMDRSFLQVVNPALSASFESSFFPDLSPSSVVTAEN
        MEKR KEYQTP RD AANRRS+KP KI KSL ATFSS  DDK+QPI  EDFSPI  VS+I+Q+PD+D SFLQ VNPALS S ESS FP+LSPSSVVT +N
Subjt:  MEKRMKEYQTPQRDPAANRRSRKPQKIAKSLAATFSSLSDDKVQPISMEDFSPIYEVSDINQVPDMDRSFLQVVNPALSASFESSFFPDLSPSSVVTAEN

Query:  EQTDKIPVNFAGSNDLVKGSACSVEAEIAVDFLRRALSQLLQSTDVDHQSKKLLDASMRIIVEDFVAIPQEQDHIAQLISAKSLVLSLCFFLWIIILALA
        +Q DK+PVNF  SN+L + SA SVEAEIAV++LRRAL Q+LQSTDVDHQSKKL+DAS+RIIV+DF+AIPQE+D I +LIS+KS VLSL  FLWII+L LA
Subjt:  EQTDKIPVNFAGSNDLVKGSACSVEAEIAVDFLRRALSQLLQSTDVDHQSKKLLDASMRIIVEDFVAIPQEQDHIAQLISAKSLVLSLCFFLWIIILALA

Query:  FFFGSGAKSSFSGPPPT
        FF GSG ++ F GP PT
Subjt:  FFFGSGAKSSFSGPPPT

XP_038876305.1 uncharacterized protein LOC120068561 [Benincasa hispida]1.3e-7975.12Show/hide
Query:  MEKRMKEYQTPQRDPAANRRSRKPQKIAKSLAATFSSLSDDKVQPISMEDFSPIYEVSDINQVPDMDRSFLQVVNPALSASFESSFFPDLSPSSVVTAEN
        MEK+MK+YQTPQRD  ANRRSRKPQKIAK L ATFSSLSDDK+QPIS EDFSPI  V+DINQ+PD+D +FLQ VNPA SAS E+S F DLSPSSVV+ +N
Subjt:  MEKRMKEYQTPQRDPAANRRSRKPQKIAKSLAATFSSLSDDKVQPISMEDFSPIYEVSDINQVPDMDRSFLQVVNPALSASFESSFFPDLSPSSVVTAEN

Query:  EQTDKIPVNFAGSNDLVKGSACSVEAEIAVDFLRRALSQLLQSTDVDHQSKKLLDASMRIIVEDFVAIPQEQDHIAQLISAKSLVLSLCFFLWIIILALA
        EQ DK+PVNF+GSND+ + SA SVE +IAV+ LRRAL+Q+LQSTDVDHQSKKL+DASM IIV+DF+AIPQE+D IAQLIS K+ VLSLC FLWII+LA+A
Subjt:  EQTDKIPVNFAGSNDLVKGSACSVEAEIAVDFLRRALSQLLQSTDVDHQSKKLLDASMRIIVEDFVAIPQEQDHIAQLISAKSLVLSLCFFLWIIILALA

Query:  FFFGSGAKSSFSGPPPT
        FF GSG KSSF GP PT
Subjt:  FFFGSGAKSSFSGPPPT

TrEMBL top hitse value%identityAlignment
A0A1S4E1Y8 uncharacterized protein LOC1034977814.8e-7268.66Show/hide
Query:  MEKRMKEYQTPQRDPAANRRSRKPQKIAKSLAATFSSLSDDKVQPISMEDFSPIYEVSDINQVPDMDRSFLQVVNPALSASFESSFFPDLSPSSVVTAEN
        MEKRMK++QTPQR+   NRRSRKPQKIAK L A+FSSLS+DK+  IS E+ SPI  VSD+NQ+ D+D SFLQ VNP  SA  ++S FPDLSPSSVV+ +N
Subjt:  MEKRMKEYQTPQRDPAANRRSRKPQKIAKSLAATFSSLSDDKVQPISMEDFSPIYEVSDINQVPDMDRSFLQVVNPALSASFESSFFPDLSPSSVVTAEN

Query:  EQTDKIPVNFAGSNDLVKGSACSVEAEIAVDFLRRALSQLLQSTDVDHQSKKLLDASMRIIVEDFVAIPQEQDHIAQLISAKSLVLSLCFFLWIIILALA
        E  DK+ V+F+GSND+ + SA S+EAEIAV+ LRRAL+Q+L STDVDHQSKKL+DASMRIIV+DF+AIPQE+D IAQLIS K+ VLS+C FLWI++LA+A
Subjt:  EQTDKIPVNFAGSNDLVKGSACSVEAEIAVDFLRRALSQLLQSTDVDHQSKKLLDASMRIIVEDFVAIPQEQDHIAQLISAKSLVLSLCFFLWIIILALA

Query:  FFFGSGAKSSFSGPPPT
        FF GSG KSSF+GP PT
Subjt:  FFFGSGAKSSFSGPPPT

A0A6J1CAA2 uncharacterized protein LOC1110098281.3e-10999.54Show/hide
Query:  MEKRMKEYQTPQRDPAANRRSRKPQKIAKSLAATFSSLSDDKVQPISMEDFSPIYEVSDINQVPDMDRSFLQVVNPALSASFESSFFPDLSPSSVVTAEN
        MEKRMKEYQTPQRDPAANRRSRKPQKIAKSLAATFSSLSDDKVQPISMEDFSPIYEVSDINQVPDMDRSFLQVVNPALSASFESSFFPDLSPSSVVTAEN
Subjt:  MEKRMKEYQTPQRDPAANRRSRKPQKIAKSLAATFSSLSDDKVQPISMEDFSPIYEVSDINQVPDMDRSFLQVVNPALSASFESSFFPDLSPSSVVTAEN

Query:  EQTDKIPVNFAGSNDLVKGSACSVEAEIAVDFLRRALSQLLQSTDVDHQSKKLLDASMRIIVEDFVAIPQEQDHIAQLISAKSLVLSLCFFLWIIILALA
        EQTDKIPVNFAGSNDLVKGSACSVEAEIAVDFLRRALSQ+LQSTDVDHQSKKLLDASMRIIVEDFVAIPQEQDHIAQLISAKSLVLSLCFFLWIIILALA
Subjt:  EQTDKIPVNFAGSNDLVKGSACSVEAEIAVDFLRRALSQLLQSTDVDHQSKKLLDASMRIIVEDFVAIPQEQDHIAQLISAKSLVLSLCFFLWIIILALA

Query:  FFFGSGAKSSFSGPPPT
        FFFGSGAKSSFSGPPPT
Subjt:  FFFGSGAKSSFSGPPPT

A0A6J1EQ83 uncharacterized protein LOC1114368223.0e-7472.35Show/hide
Query:  MEKRMKEYQTPQRDPAANRRSRKPQKIAKSLAATFSSLSDDKVQPISMEDFSPIYEVSDINQVPDMDRSFLQVVNPALSASFESSFFPDLSPSSVVTAEN
        MEKR KEYQTP RD AANRRS+KP KI KSL ATFSS  DDK+QPI  EDFSPI  VS+I+Q+PD+D SFLQ VNPALS S ESS FP+LSPSSVVT +N
Subjt:  MEKRMKEYQTPQRDPAANRRSRKPQKIAKSLAATFSSLSDDKVQPISMEDFSPIYEVSDINQVPDMDRSFLQVVNPALSASFESSFFPDLSPSSVVTAEN

Query:  EQTDKIPVNFAGSNDLVKGSACSVEAEIAVDFLRRALSQLLQSTDVDHQSKKLLDASMRIIVEDFVAIPQEQDHIAQLISAKSLVLSLCFFLWIIILALA
        +Q DK+PVNF GSN+L + SA SVEAEIAV++LRRALSQ+LQSTDVDHQSKKL+DAS+RIIV++F+AIPQE+D I +LIS+KS VLSL  FLWII+L LA
Subjt:  EQTDKIPVNFAGSNDLVKGSACSVEAEIAVDFLRRALSQLLQSTDVDHQSKKLLDASMRIIVEDFVAIPQEQDHIAQLISAKSLVLSLCFFLWIIILALA

Query:  FFFGSGAKSSFSGPPPT
        FF GSG ++ F GP PT
Subjt:  FFFGSGAKSSFSGPPPT

A0A6J1H5Y6 uncharacterized protein LOC111460327 isoform X12.2e-7271.43Show/hide
Query:  MEKRMKEYQTPQRDPAANRRSRKPQKIAKSLAATFSSLSDDKVQPISMEDFSPIYEVSDINQVPDMDRSFLQVVNPALSASFESSFFPDLSPSSVVTAEN
        ME+RMK+ QTPQRD AANRRSRKP KIAK L ATFSSLSDDK+Q  S +DFS I  VSD+NQ+PD+DRSFL  VNPALSA   SS  PDLSPSSVVT +N
Subjt:  MEKRMKEYQTPQRDPAANRRSRKPQKIAKSLAATFSSLSDDKVQPISMEDFSPIYEVSDINQVPDMDRSFLQVVNPALSASFESSFFPDLSPSSVVTAEN

Query:  EQTDKIPVNFAGSNDLVKGSACSVEAEIAVDFLRRALSQLLQSTDVDHQSKKLLDASMRIIVEDFVAIPQEQDHIAQLISAKSLVLSLCFFLWIIILALA
         Q DK+PVNF+GSNDL +  A SV AEIAV  L RAL+Q+LQSTDVDHQ+KKL+DAS+RIIV+DF+AIPQ++DHI Q+ISAK+ VLS+  FLWII+LALA
Subjt:  EQTDKIPVNFAGSNDLVKGSACSVEAEIAVDFLRRALSQLLQSTDVDHQSKKLLDASMRIIVEDFVAIPQEQDHIAQLISAKSLVLSLCFFLWIIILALA

Query:  FFFGSGAKSSFSGPPPT
        FFF S  KSSF GP PT
Subjt:  FFFGSGAKSSFSGPPPT

A0A6J1KL67 uncharacterized protein LOC1114942864.4e-7371.89Show/hide
Query:  MEKRMKEYQTPQRDPAANRRSRKPQKIAKSLAATFSSLSDDKVQPISMEDFSPIYEVSDINQVPDMDRSFLQVVNPALSASFESSFFPDLSPSSVVTAEN
        MEKR KEYQTP RD AANRRS+KP KI KSL ATFSS  DDK+QPI  EDFSPI  VS+I+Q+PD+D SFLQ VNPALS S ESS FP+LSPSSVVT +N
Subjt:  MEKRMKEYQTPQRDPAANRRSRKPQKIAKSLAATFSSLSDDKVQPISMEDFSPIYEVSDINQVPDMDRSFLQVVNPALSASFESSFFPDLSPSSVVTAEN

Query:  EQTDKIPVNFAGSNDLVKGSACSVEAEIAVDFLRRALSQLLQSTDVDHQSKKLLDASMRIIVEDFVAIPQEQDHIAQLISAKSLVLSLCFFLWIIILALA
        +Q DK+PVNF  SN+L + SA SVEAEIAV++LRRAL Q+LQSTDVDHQSKKL+DAS+RIIV+DF+AIPQE+D I +LIS+KS VLSL  FLWII+L LA
Subjt:  EQTDKIPVNFAGSNDLVKGSACSVEAEIAVDFLRRALSQLLQSTDVDHQSKKLLDASMRIIVEDFVAIPQEQDHIAQLISAKSLVLSLCFFLWIIILALA

Query:  FFFGSGAKSSFSGPPPT
        FF GSG ++ F GP PT
Subjt:  FFFGSGAKSSFSGPPPT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAAAGGATGAAAGAATACCAAACTCCGCAGAGGGATCCTGCAGCAAATCGTAGATCAAGGAAGCCTCAGAAGATCGCCAAGAGCTTGGCTGCTACATTTTCATC
ACTTTCTGACGATAAAGTCCAGCCAATTTCGATGGAAGATTTCTCTCCGATTTACGAAGTCTCAGACATCAATCAAGTTCCAGATATGGACCGTAGTTTCTTGCAAGTTG
TTAATCCAGCTCTTTCTGCTTCCTTTGAGAGCTCTTTTTTCCCTGATCTTTCTCCATCGTCAGTTGTCACCGCTGAAAATGAACAGACAGACAAGATTCCTGTTAATTTC
GCTGGATCTAATGATTTAGTTAAAGGAAGCGCGTGTTCGGTGGAGGCAGAGATTGCCGTGGATTTTTTAAGGCGTGCTCTGTCTCAACTCCTGCAATCGACGGATGTTGA
CCATCAGTCTAAGAAGCTTCTTGATGCATCCATGAGGATCATTGTGGAGGACTTCGTTGCTATACCTCAAGAGCAAGACCACATTGCTCAACTTATTTCTGCCAAAAGTC
TTGTACTGTCTCTATGTTTTTTCCTGTGGATCATTATCTTGGCGTTAGCTTTCTTTTTTGGTTCGGGAGCCAAGAGCTCTTTCTCGGGGCCACCGCCAACT
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAAAGGATGAAAGAATACCAAACTCCGCAGAGGGATCCTGCAGCAAATCGTAGATCAAGGAAGCCTCAGAAGATCGCCAAGAGCTTGGCTGCTACATTTTCATC
ACTTTCTGACGATAAAGTCCAGCCAATTTCGATGGAAGATTTCTCTCCGATTTACGAAGTCTCAGACATCAATCAAGTTCCAGATATGGACCGTAGTTTCTTGCAAGTTG
TTAATCCAGCTCTTTCTGCTTCCTTTGAGAGCTCTTTTTTCCCTGATCTTTCTCCATCGTCAGTTGTCACCGCTGAAAATGAACAGACAGACAAGATTCCTGTTAATTTC
GCTGGATCTAATGATTTAGTTAAAGGAAGCGCGTGTTCGGTGGAGGCAGAGATTGCCGTGGATTTTTTAAGGCGTGCTCTGTCTCAACTCCTGCAATCGACGGATGTTGA
CCATCAGTCTAAGAAGCTTCTTGATGCATCCATGAGGATCATTGTGGAGGACTTCGTTGCTATACCTCAAGAGCAAGACCACATTGCTCAACTTATTTCTGCCAAAAGTC
TTGTACTGTCTCTATGTTTTTTCCTGTGGATCATTATCTTGGCGTTAGCTTTCTTTTTTGGTTCGGGAGCCAAGAGCTCTTTCTCGGGGCCACCGCCAACT
Protein sequenceShow/hide protein sequence
MEKRMKEYQTPQRDPAANRRSRKPQKIAKSLAATFSSLSDDKVQPISMEDFSPIYEVSDINQVPDMDRSFLQVVNPALSASFESSFFPDLSPSSVVTAENEQTDKIPVNF
AGSNDLVKGSACSVEAEIAVDFLRRALSQLLQSTDVDHQSKKLLDASMRIIVEDFVAIPQEQDHIAQLISAKSLVLSLCFFLWIIILALAFFFGSGAKSSFSGPPPT