; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS019358 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019358
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionflowering time control protein FCA isoform X2
Genome locationscaffold611:588607..589544
RNA-Seq ExpressionMS019358
SyntenyMS019358
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:1990904 - ribonucleoprotein complex (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001202 - WW domain
IPR036020 - WW domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148821.1 flowering time control protein FCA isoform X2 [Cucumis sativus]6.4e-9180.72Show/hide
Query:  PSQESPGLGGQLPVSQAMAQLGASSSAATQAPLSVNLQSHAVSAANQQQLPAPVQPHQNSPSQLAHMLSQQKQTLQASFQSSQQAFSQLQQQLQLIQPSN
        PSQESPGLGGQL VSQ+M   GASS+AAT  PLS+NLQSHA +A +QQQLP P+QP QNSPSQLAHMLSQQKQTLQA FQSSQQAFSQLQQQLQLIQP N
Subjt:  PSQESPGLGGQLPVSQAMAQLGASSSAATQAPLSVNLQSHAVSAANQQQLPAPVQPHQNSPSQLAHMLSQQKQTLQASFQSSQQAFSQLQQQLQLIQPSN

Query:  QSSALHQSSQAIKQQSHWVGVVSQSTASATSSVTSDTHSSTVVPPATINTQVVAPLKCNWTEHTSPDGYKYYYNSVTGESKWERPEELAAIEQQQKPQPP
        QSS L  SSQ IKQQ HW GVV+ + ASA +S TSD H+ST VPPA INTQVVAP+KCNWTEHTSPDGYKYYYNSVTGESKWERPEEL+ IEQQQ+ +PP
Subjt:  QSSALHQSSQAIKQQSHWVGVVSQSTASATSSVTSDTHSSTVVPPATINTQVVAPLKCNWTEHTSPDGYKYYYNSVTGESKWERPEELAAIEQQQKPQPP

Query:  VLQPHNQPHPQLLSAQQLSQTPQAQIQAQFQT--QMPHPQPLQQPSFPS
        +LQPHNQPHPQLLS QQLSQTPQAQ+Q QFQT  QMPHPQPLQQPSF S
Subjt:  VLQPHNQPHPQLLSAQQLSQTPQAQIQAQFQT--QMPHPQPLQQPSFPS

XP_022138513.1 flowering time control protein FCA isoform X1 [Momordica charantia]6.0e-12199.19Show/hide
Query:  PSQESPGLGGQLPVSQAMAQLGASSSAATQAPLSVNLQSHAVSAANQQQLPAPVQPHQNSPSQLAHMLSQQKQTLQASFQSSQQAFSQLQQQLQLIQPSN
        PSQESPGLGGQLPVSQAMAQ GASSSAATQAPLSVNLQSHAVSAANQQQLPAPVQPHQNSPSQLAHMLSQQKQTLQASFQSSQQAFSQLQQQLQLIQPSN
Subjt:  PSQESPGLGGQLPVSQAMAQLGASSSAATQAPLSVNLQSHAVSAANQQQLPAPVQPHQNSPSQLAHMLSQQKQTLQASFQSSQQAFSQLQQQLQLIQPSN

Query:  QSSALHQSSQAIKQQSHWVGVVSQSTASATSSVTSDTHSSTVVPPATINTQVVAPLKCNWTEHTSPDGYKYYYNSVTGESKWERPEELAAIEQQQKPQPP
        QSSALHQSSQAIKQQSHWVGVVSQSTASATSSVTSDTHSSTVVPPATINTQVVAPLKCNWTEHTSPDGYKYYYNSVTGESKWERPEELAAIEQQQKPQPP
Subjt:  QSSALHQSSQAIKQQSHWVGVVSQSTASATSSVTSDTHSSTVVPPATINTQVVAPLKCNWTEHTSPDGYKYYYNSVTGESKWERPEELAAIEQQQKPQPP

Query:  VLQPHNQPHPQLLSAQQLSQTPQAQIQAQFQTQMPHPQPLQQPSFPS
        VLQPHNQPH QLLSAQQLSQTPQAQIQAQFQTQMPHPQPLQQPSFPS
Subjt:  VLQPHNQPHPQLLSAQQLSQTPQAQIQAQFQTQMPHPQPLQQPSFPS

XP_022138515.1 flowering time control protein FCA isoform X2 [Momordica charantia]6.0e-12199.19Show/hide
Query:  PSQESPGLGGQLPVSQAMAQLGASSSAATQAPLSVNLQSHAVSAANQQQLPAPVQPHQNSPSQLAHMLSQQKQTLQASFQSSQQAFSQLQQQLQLIQPSN
        PSQESPGLGGQLPVSQAMAQ GASSSAATQAPLSVNLQSHAVSAANQQQLPAPVQPHQNSPSQLAHMLSQQKQTLQASFQSSQQAFSQLQQQLQLIQPSN
Subjt:  PSQESPGLGGQLPVSQAMAQLGASSSAATQAPLSVNLQSHAVSAANQQQLPAPVQPHQNSPSQLAHMLSQQKQTLQASFQSSQQAFSQLQQQLQLIQPSN

Query:  QSSALHQSSQAIKQQSHWVGVVSQSTASATSSVTSDTHSSTVVPPATINTQVVAPLKCNWTEHTSPDGYKYYYNSVTGESKWERPEELAAIEQQQKPQPP
        QSSALHQSSQAIKQQSHWVGVVSQSTASATSSVTSDTHSSTVVPPATINTQVVAPLKCNWTEHTSPDGYKYYYNSVTGESKWERPEELAAIEQQQKPQPP
Subjt:  QSSALHQSSQAIKQQSHWVGVVSQSTASATSSVTSDTHSSTVVPPATINTQVVAPLKCNWTEHTSPDGYKYYYNSVTGESKWERPEELAAIEQQQKPQPP

Query:  VLQPHNQPHPQLLSAQQLSQTPQAQIQAQFQTQMPHPQPLQQPSFPS
        VLQPHNQPH QLLSAQQLSQTPQAQIQAQFQTQMPHPQPLQQPSFPS
Subjt:  VLQPHNQPHPQLLSAQQLSQTPQAQIQAQFQTQMPHPQPLQQPSFPS

XP_022138516.1 flowering time control protein FCA isoform X3 [Momordica charantia]6.0e-12199.19Show/hide
Query:  PSQESPGLGGQLPVSQAMAQLGASSSAATQAPLSVNLQSHAVSAANQQQLPAPVQPHQNSPSQLAHMLSQQKQTLQASFQSSQQAFSQLQQQLQLIQPSN
        PSQESPGLGGQLPVSQAMAQ GASSSAATQAPLSVNLQSHAVSAANQQQLPAPVQPHQNSPSQLAHMLSQQKQTLQASFQSSQQAFSQLQQQLQLIQPSN
Subjt:  PSQESPGLGGQLPVSQAMAQLGASSSAATQAPLSVNLQSHAVSAANQQQLPAPVQPHQNSPSQLAHMLSQQKQTLQASFQSSQQAFSQLQQQLQLIQPSN

Query:  QSSALHQSSQAIKQQSHWVGVVSQSTASATSSVTSDTHSSTVVPPATINTQVVAPLKCNWTEHTSPDGYKYYYNSVTGESKWERPEELAAIEQQQKPQPP
        QSSALHQSSQAIKQQSHWVGVVSQSTASATSSVTSDTHSSTVVPPATINTQVVAPLKCNWTEHTSPDGYKYYYNSVTGESKWERPEELAAIEQQQKPQPP
Subjt:  QSSALHQSSQAIKQQSHWVGVVSQSTASATSSVTSDTHSSTVVPPATINTQVVAPLKCNWTEHTSPDGYKYYYNSVTGESKWERPEELAAIEQQQKPQPP

Query:  VLQPHNQPHPQLLSAQQLSQTPQAQIQAQFQTQMPHPQPLQQPSFPS
        VLQPHNQPH QLLSAQQLSQTPQAQIQAQFQTQMPHPQPLQQPSFPS
Subjt:  VLQPHNQPHPQLLSAQQLSQTPQAQIQAQFQTQMPHPQPLQQPSFPS

XP_038907167.1 LOW QUALITY PROTEIN: flowering time control protein FCA [Benincasa hispida]8.1e-9482.07Show/hide
Query:  PSQESPGLGGQLPVSQAMAQLGASSSAATQAPLSVNLQSHAVSAANQQQLPAPVQPHQNSPSQLAHMLSQQKQTLQASFQSSQQAFSQLQQQLQLIQPSN
        PSQ SPGLG QLPVSQAM Q GASS+AAT  PLS+NLQSHA +A NQQQLP P+QP QNSPSQLAHMLSQQKQTLQA FQSSQQAFSQLQQQLQLIQPSN
Subjt:  PSQESPGLGGQLPVSQAMAQLGASSSAATQAPLSVNLQSHAVSAANQQQLPAPVQPHQNSPSQLAHMLSQQKQTLQASFQSSQQAFSQLQQQLQLIQPSN

Query:  QSSALHQSSQAIKQ----QSHWVGVVSQSTASATSSVTSDTHSSTVVPPATINTQVVAPLKCNWTEHTSPDGYKYYYNSVTGESKWERPEELAAIEQQQK
        QSS L  SSQ IKQ    QSHW GVV Q+ ASA +S TSD H+ST VPP  INTQVVAP+KCNWTEHTSPDGYKYYYNSVTGESKWE+PEEL+AIEQQQK
Subjt:  QSSALHQSSQAIKQ----QSHWVGVVSQSTASATSSVTSDTHSSTVVPPATINTQVVAPLKCNWTEHTSPDGYKYYYNSVTGESKWERPEELAAIEQQQK

Query:  PQPPVLQPHNQPHPQLLSAQQLSQTPQAQIQAQFQTQMPHPQPLQQPSFPS
          PPVLQPHNQPHPQ+LS+QQLSQTPQAQ+Q QFQTQMPHPQPLQQPSF S
Subjt:  PQPPVLQPHNQPHPQLLSAQQLSQTPQAQIQAQFQTQMPHPQPLQQPSFPS

TrEMBL top hitse value%identityAlignment
A0A0A0KI53 Uncharacterized protein3.1e-9180.72Show/hide
Query:  PSQESPGLGGQLPVSQAMAQLGASSSAATQAPLSVNLQSHAVSAANQQQLPAPVQPHQNSPSQLAHMLSQQKQTLQASFQSSQQAFSQLQQQLQLIQPSN
        PSQESPGLGGQL VSQ+M   GASS+AAT  PLS+NLQSHA +A +QQQLP P+QP QNSPSQLAHMLSQQKQTLQA FQSSQQAFSQLQQQLQLIQP N
Subjt:  PSQESPGLGGQLPVSQAMAQLGASSSAATQAPLSVNLQSHAVSAANQQQLPAPVQPHQNSPSQLAHMLSQQKQTLQASFQSSQQAFSQLQQQLQLIQPSN

Query:  QSSALHQSSQAIKQQSHWVGVVSQSTASATSSVTSDTHSSTVVPPATINTQVVAPLKCNWTEHTSPDGYKYYYNSVTGESKWERPEELAAIEQQQKPQPP
        QSS L  SSQ IKQQ HW GVV+ + ASA +S TSD H+ST VPPA INTQVVAP+KCNWTEHTSPDGYKYYYNSVTGESKWERPEEL+ IEQQQ+ +PP
Subjt:  QSSALHQSSQAIKQQSHWVGVVSQSTASATSSVTSDTHSSTVVPPATINTQVVAPLKCNWTEHTSPDGYKYYYNSVTGESKWERPEELAAIEQQQKPQPP

Query:  VLQPHNQPHPQLLSAQQLSQTPQAQIQAQFQT--QMPHPQPLQQPSFPS
        +LQPHNQPHPQLLS QQLSQTPQAQ+Q QFQT  QMPHPQPLQQPSF S
Subjt:  VLQPHNQPHPQLLSAQQLSQTPQAQIQAQFQT--QMPHPQPLQQPSFPS

A0A5D3BTH3 Flowering time control protein FCA isoform X24.2e-8879.52Show/hide
Query:  PSQESPGLGGQLPVSQAMAQLGASSSAATQAPLSVNLQSHAVSAANQQQLPAPVQPHQNSPSQLAHMLSQQKQTLQASFQSSQQAFSQLQQQLQLIQPSN
        PSQESPGLGGQL VSQ+M   GASS+AAT APLS+NLQSHA +A +QQQLP P+QP QNSPSQLAHMLSQQKQTLQA FQSSQQAFSQLQQQLQ IQP N
Subjt:  PSQESPGLGGQLPVSQAMAQLGASSSAATQAPLSVNLQSHAVSAANQQQLPAPVQPHQNSPSQLAHMLSQQKQTLQASFQSSQQAFSQLQQQLQLIQPSN

Query:  QSSALHQSSQAIKQQSHWVGVVSQSTASATSSVTSDTHSSTVVPPATINTQVVAPLKCNWTEHTSPDGYKYYYNSVTGESKWERPEELAAIEQQQKPQPP
        QSS L  SSQ IKQQ HW GV   + ASATS+ TSD H+ST VPPA  NTQVVAP+KCNWTEHTSPDGYKYYYNSVTGESKWERPEEL+ IEQQQ+ +PP
Subjt:  QSSALHQSSQAIKQQSHWVGVVSQSTASATSSVTSDTHSSTVVPPATINTQVVAPLKCNWTEHTSPDGYKYYYNSVTGESKWERPEELAAIEQQQKPQPP

Query:  VLQPHNQPHPQLLSAQQLSQTPQAQIQAQFQTQ--MPHPQPLQQPSFPS
        +LQPHNQPHPQLLS QQLSQTPQ Q+Q QFQTQ  MPHPQPL QPSF S
Subjt:  VLQPHNQPHPQLLSAQQLSQTPQAQIQAQFQTQ--MPHPQPLQQPSFPS

A0A6J1C9N0 flowering time control protein FCA isoform X22.9e-12199.19Show/hide
Query:  PSQESPGLGGQLPVSQAMAQLGASSSAATQAPLSVNLQSHAVSAANQQQLPAPVQPHQNSPSQLAHMLSQQKQTLQASFQSSQQAFSQLQQQLQLIQPSN
        PSQESPGLGGQLPVSQAMAQ GASSSAATQAPLSVNLQSHAVSAANQQQLPAPVQPHQNSPSQLAHMLSQQKQTLQASFQSSQQAFSQLQQQLQLIQPSN
Subjt:  PSQESPGLGGQLPVSQAMAQLGASSSAATQAPLSVNLQSHAVSAANQQQLPAPVQPHQNSPSQLAHMLSQQKQTLQASFQSSQQAFSQLQQQLQLIQPSN

Query:  QSSALHQSSQAIKQQSHWVGVVSQSTASATSSVTSDTHSSTVVPPATINTQVVAPLKCNWTEHTSPDGYKYYYNSVTGESKWERPEELAAIEQQQKPQPP
        QSSALHQSSQAIKQQSHWVGVVSQSTASATSSVTSDTHSSTVVPPATINTQVVAPLKCNWTEHTSPDGYKYYYNSVTGESKWERPEELAAIEQQQKPQPP
Subjt:  QSSALHQSSQAIKQQSHWVGVVSQSTASATSSVTSDTHSSTVVPPATINTQVVAPLKCNWTEHTSPDGYKYYYNSVTGESKWERPEELAAIEQQQKPQPP

Query:  VLQPHNQPHPQLLSAQQLSQTPQAQIQAQFQTQMPHPQPLQQPSFPS
        VLQPHNQPH QLLSAQQLSQTPQAQIQAQFQTQMPHPQPLQQPSFPS
Subjt:  VLQPHNQPHPQLLSAQQLSQTPQAQIQAQFQTQMPHPQPLQQPSFPS

A0A6J1C9Y2 flowering time control protein FCA isoform X32.9e-12199.19Show/hide
Query:  PSQESPGLGGQLPVSQAMAQLGASSSAATQAPLSVNLQSHAVSAANQQQLPAPVQPHQNSPSQLAHMLSQQKQTLQASFQSSQQAFSQLQQQLQLIQPSN
        PSQESPGLGGQLPVSQAMAQ GASSSAATQAPLSVNLQSHAVSAANQQQLPAPVQPHQNSPSQLAHMLSQQKQTLQASFQSSQQAFSQLQQQLQLIQPSN
Subjt:  PSQESPGLGGQLPVSQAMAQLGASSSAATQAPLSVNLQSHAVSAANQQQLPAPVQPHQNSPSQLAHMLSQQKQTLQASFQSSQQAFSQLQQQLQLIQPSN

Query:  QSSALHQSSQAIKQQSHWVGVVSQSTASATSSVTSDTHSSTVVPPATINTQVVAPLKCNWTEHTSPDGYKYYYNSVTGESKWERPEELAAIEQQQKPQPP
        QSSALHQSSQAIKQQSHWVGVVSQSTASATSSVTSDTHSSTVVPPATINTQVVAPLKCNWTEHTSPDGYKYYYNSVTGESKWERPEELAAIEQQQKPQPP
Subjt:  QSSALHQSSQAIKQQSHWVGVVSQSTASATSSVTSDTHSSTVVPPATINTQVVAPLKCNWTEHTSPDGYKYYYNSVTGESKWERPEELAAIEQQQKPQPP

Query:  VLQPHNQPHPQLLSAQQLSQTPQAQIQAQFQTQMPHPQPLQQPSFPS
        VLQPHNQPH QLLSAQQLSQTPQAQIQAQFQTQMPHPQPLQQPSFPS
Subjt:  VLQPHNQPHPQLLSAQQLSQTPQAQIQAQFQTQMPHPQPLQQPSFPS

A0A6J1CD68 flowering time control protein FCA isoform X12.9e-12199.19Show/hide
Query:  PSQESPGLGGQLPVSQAMAQLGASSSAATQAPLSVNLQSHAVSAANQQQLPAPVQPHQNSPSQLAHMLSQQKQTLQASFQSSQQAFSQLQQQLQLIQPSN
        PSQESPGLGGQLPVSQAMAQ GASSSAATQAPLSVNLQSHAVSAANQQQLPAPVQPHQNSPSQLAHMLSQQKQTLQASFQSSQQAFSQLQQQLQLIQPSN
Subjt:  PSQESPGLGGQLPVSQAMAQLGASSSAATQAPLSVNLQSHAVSAANQQQLPAPVQPHQNSPSQLAHMLSQQKQTLQASFQSSQQAFSQLQQQLQLIQPSN

Query:  QSSALHQSSQAIKQQSHWVGVVSQSTASATSSVTSDTHSSTVVPPATINTQVVAPLKCNWTEHTSPDGYKYYYNSVTGESKWERPEELAAIEQQQKPQPP
        QSSALHQSSQAIKQQSHWVGVVSQSTASATSSVTSDTHSSTVVPPATINTQVVAPLKCNWTEHTSPDGYKYYYNSVTGESKWERPEELAAIEQQQKPQPP
Subjt:  QSSALHQSSQAIKQQSHWVGVVSQSTASATSSVTSDTHSSTVVPPATINTQVVAPLKCNWTEHTSPDGYKYYYNSVTGESKWERPEELAAIEQQQKPQPP

Query:  VLQPHNQPHPQLLSAQQLSQTPQAQIQAQFQTQMPHPQPLQQPSFPS
        VLQPHNQPH QLLSAQQLSQTPQAQIQAQFQTQMPHPQPLQQPSFPS
Subjt:  VLQPHNQPHPQLLSAQQLSQTPQAQIQAQFQTQMPHPQPLQQPSFPS

SwissProt top hitse value%identityAlignment
B8BCZ8 Flowering time control protein FCA1.0e-2742.97Show/hide
Query:  PSQESPG------LGGQLPVSQAMAQLGASSSAATQAPLSVNLQSHAVSAANQQQLPAPV------QPHQNSPSQLAHMLSQQKQTLQASFQSSQQAFSQ
        P    PG      L GQLPVSQ + Q  A S  A QAP +V+    A+    QQ LP+ V      QP Q  PSQ   +L QQ+  LQ+S+QSSQQA  Q
Subjt:  PSQESPG------LGGQLPVSQAMAQLGASSSAATQAPLSVNLQSHAVSAANQQQLPAPV------QPHQNSPSQLAHMLSQQKQTLQASFQSSQQAFSQ

Query:  LQQQLQLIQPSNQSSALHQSSQAIKQQSHWVGVVSQSTASATSSVTSDTHSSTVVPPATINTQVVAPLKCNWTEHTSPDGYKYYYNSVTGESKWERPEEL
        LQQQLQL+Q   QS+  HQ      Q +    V S +  +  + + S+ ++   +P     T    PL CNWTEHTSP+G+KYYYNS+T ESKW++PEE 
Subjt:  LQQQLQLIQPSNQSSALHQSSQAIKQQSHWVGVVSQSTASATSSVTSDTHSSTVVPPATINTQVVAPLKCNWTEHTSPDGYKYYYNSVTGESKWERPEEL

Query:  AAIEQQQKPQPPVLQPHNQPHPQLLSAQQLSQTPQAQIQAQFQ--TQMPHPQPLQQ
           EQQQ+ Q        Q H Q L+ QQL   PQAQ     Q   Q+P  Q  QQ
Subjt:  AAIEQQQKPQPPVLQPHNQPHPQLLSAQQLSQTPQAQIQAQFQ--TQMPHPQPLQQ

O04425 Flowering time control protein FCA5.7e-3446.48Show/hide
Query:  PSQESPGLGGQLPVSQAMAQLGASSSAATQAPLSVNLQSHAVSAANQQQLP----APVQPHQNSPSQLAHMLSQQKQTLQASFQSSQQAFSQLQQQLQLI
        P Q       QLP SQ   Q   S + A Q PL++NL+   VS+A  Q  P     P+Q  Q+ PS+LA +LSQQ Q+LQA+FQSSQQA SQLQQQ+Q +
Subjt:  PSQESPGLGGQLPVSQAMAQLGASSSAATQAPLSVNLQSHAVSAANQQQLP----APVQPHQNSPSQLAHMLSQQKQTLQASFQSSQQAFSQLQQQLQLI

Query:  QPSNQSSALHQSSQAIKQQSHWVGVVSQSTASATSSVTSDTHSSTVVPPATINTQVVAPLKCNWTEHTSPDGYKYYYNSVTGESKWERPEELAAIE----
        Q  NQ+  L Q+ +A KQQ  W G    S     +S T  T  S V   A   +Q V  +KC WTEHTSPDG+KYYYN +TGESKWE+PEE+   E    
Subjt:  QPSNQSSALHQSSQAIKQQSHWVGVVSQSTASATSSVTSDTHSSTVVPPATINTQVVAPLKCNWTEHTSPDGYKYYYNSVTGESKWERPEELAAIE----

Query:  -QQQKPQPPVLQPHNQPHPQLLSAQQLSQTPQAQIQAQFQTQMPHPQPLQQPSFPS
         QQQ  + P +Q   Q   QL   Q L Q PQ Q+Q Q+Q Q      LQQP + S
Subjt:  -QQQKPQPPVLQPHNQPHPQLLSAQQLSQTPQAQIQAQFQTQMPHPQPLQQPSFPS

Q6K271 Flowering time control protein FCA8.0e-2842.97Show/hide
Query:  PSQESPG------LGGQLPVSQAMAQLGASSSAATQAPLSVNLQSHAVSAANQQQLPAPV------QPHQNSPSQLAHMLSQQKQTLQASFQSSQQAFSQ
        P    PG      L GQLPVSQ + Q  AS S A Q P +V+    A+    QQ LP+ V      QP Q  PSQ   +L QQ+  LQ+S+QSSQQA  Q
Subjt:  PSQESPG------LGGQLPVSQAMAQLGASSSAATQAPLSVNLQSHAVSAANQQQLPAPV------QPHQNSPSQLAHMLSQQKQTLQASFQSSQQAFSQ

Query:  LQQQLQLIQPSNQSSALHQSSQAIKQQSHWVGVVSQSTASATSSVTSDTHSSTVVPPATINTQVVAPLKCNWTEHTSPDGYKYYYNSVTGESKWERPEEL
        LQQQLQL+Q   QS+  HQ      Q +    V S +  +  + + S+ ++   +P     T    PL CNWTEHTSP+G+KYYYNS+T ESKW++PEE 
Subjt:  LQQQLQLIQPSNQSSALHQSSQAIKQQSHWVGVVSQSTASATSSVTSDTHSSTVVPPATINTQVVAPLKCNWTEHTSPDGYKYYYNSVTGESKWERPEEL

Query:  AAIEQQQKPQPPVLQPHNQPHPQLLSAQQLSQTPQAQIQAQFQ--TQMPHPQPLQQ
           EQQQ+ Q        Q H Q L+ QQL   PQAQ     Q   Q+P  Q  QQ
Subjt:  AAIEQQQKPQPPVLQPHNQPHPQLLSAQQLSQTPQAQIQAQFQ--TQMPHPQPLQQ

Arabidopsis top hitse value%identityAlignment
AT4G16280.1 RNA binding;abscisic acid binding4.1e-3546.48Show/hide
Query:  PSQESPGLGGQLPVSQAMAQLGASSSAATQAPLSVNLQSHAVSAANQQQLP----APVQPHQNSPSQLAHMLSQQKQTLQASFQSSQQAFSQLQQQLQLI
        P Q       QLP SQ   Q   S + A Q PL++NL+   VS+A  Q  P     P+Q  Q+ PS+LA +LSQQ Q+LQA+FQSSQQA SQLQQQ+Q +
Subjt:  PSQESPGLGGQLPVSQAMAQLGASSSAATQAPLSVNLQSHAVSAANQQQLP----APVQPHQNSPSQLAHMLSQQKQTLQASFQSSQQAFSQLQQQLQLI

Query:  QPSNQSSALHQSSQAIKQQSHWVGVVSQSTASATSSVTSDTHSSTVVPPATINTQVVAPLKCNWTEHTSPDGYKYYYNSVTGESKWERPEELAAIE----
        Q  NQ+  L Q+ +A KQQ  W G    S     +S T  T  S V   A   +Q V  +KC WTEHTSPDG+KYYYN +TGESKWE+PEE+   E    
Subjt:  QPSNQSSALHQSSQAIKQQSHWVGVVSQSTASATSSVTSDTHSSTVVPPATINTQVVAPLKCNWTEHTSPDGYKYYYNSVTGESKWERPEELAAIE----

Query:  -QQQKPQPPVLQPHNQPHPQLLSAQQLSQTPQAQIQAQFQTQMPHPQPLQQPSFPS
         QQQ  + P +Q   Q   QL   Q L Q PQ Q+Q Q+Q Q      LQQP + S
Subjt:  -QQQKPQPPVLQPHNQPHPQLLSAQQLSQTPQAQIQAQFQTQMPHPQPLQQPSFPS

AT4G16280.2 RNA binding;abscisic acid binding4.1e-3546.48Show/hide
Query:  PSQESPGLGGQLPVSQAMAQLGASSSAATQAPLSVNLQSHAVSAANQQQLP----APVQPHQNSPSQLAHMLSQQKQTLQASFQSSQQAFSQLQQQLQLI
        P Q       QLP SQ   Q   S + A Q PL++NL+   VS+A  Q  P     P+Q  Q+ PS+LA +LSQQ Q+LQA+FQSSQQA SQLQQQ+Q +
Subjt:  PSQESPGLGGQLPVSQAMAQLGASSSAATQAPLSVNLQSHAVSAANQQQLP----APVQPHQNSPSQLAHMLSQQKQTLQASFQSSQQAFSQLQQQLQLI

Query:  QPSNQSSALHQSSQAIKQQSHWVGVVSQSTASATSSVTSDTHSSTVVPPATINTQVVAPLKCNWTEHTSPDGYKYYYNSVTGESKWERPEELAAIE----
        Q  NQ+  L Q+ +A KQQ  W G    S     +S T  T  S V   A   +Q V  +KC WTEHTSPDG+KYYYN +TGESKWE+PEE+   E    
Subjt:  QPSNQSSALHQSSQAIKQQSHWVGVVSQSTASATSSVTSDTHSSTVVPPATINTQVVAPLKCNWTEHTSPDGYKYYYNSVTGESKWERPEELAAIE----

Query:  -QQQKPQPPVLQPHNQPHPQLLSAQQLSQTPQAQIQAQFQTQMPHPQPLQQPSFPS
         QQQ  + P +Q   Q   QL   Q L Q PQ Q+Q Q+Q Q      LQQP + S
Subjt:  -QQQKPQPPVLQPHNQPHPQLLSAQQLSQTPQAQIQAQFQTQMPHPQPLQQPSFPS

AT4G16280.3 RNA binding;abscisic acid binding1.7e-0948.94Show/hide
Query:  PSQESPGLGGQLPVSQAMAQLGASSSAATQAPLSVNLQSHAVSAANQQQLP----APVQPHQNSPSQLAHMLSQQKQTLQASFQSSQQAFSQLQ
        P Q       QLP SQ   Q   S + A Q PL++NL+   VS+A  Q  P     P+Q  Q+ PS+LA +LSQQ Q+LQA+FQSSQQA SQLQ
Subjt:  PSQESPGLGGQLPVSQAMAQLGASSSAATQAPLSVNLQSHAVSAANQQQLP----APVQPHQNSPSQLAHMLSQQKQTLQASFQSSQQAFSQLQ

AT4G16280.4 RNA binding;abscisic acid binding4.1e-3546.48Show/hide
Query:  PSQESPGLGGQLPVSQAMAQLGASSSAATQAPLSVNLQSHAVSAANQQQLP----APVQPHQNSPSQLAHMLSQQKQTLQASFQSSQQAFSQLQQQLQLI
        P Q       QLP SQ   Q   S + A Q PL++NL+   VS+A  Q  P     P+Q  Q+ PS+LA +LSQQ Q+LQA+FQSSQQA SQLQQQ+Q +
Subjt:  PSQESPGLGGQLPVSQAMAQLGASSSAATQAPLSVNLQSHAVSAANQQQLP----APVQPHQNSPSQLAHMLSQQKQTLQASFQSSQQAFSQLQQQLQLI

Query:  QPSNQSSALHQSSQAIKQQSHWVGVVSQSTASATSSVTSDTHSSTVVPPATINTQVVAPLKCNWTEHTSPDGYKYYYNSVTGESKWERPEELAAIE----
        Q  NQ+  L Q+ +A KQQ  W G    S     +S T  T  S V   A   +Q V  +KC WTEHTSPDG+KYYYN +TGESKWE+PEE+   E    
Subjt:  QPSNQSSALHQSSQAIKQQSHWVGVVSQSTASATSSVTSDTHSSTVVPPATINTQVVAPLKCNWTEHTSPDGYKYYYNSVTGESKWERPEELAAIE----

Query:  -QQQKPQPPVLQPHNQPHPQLLSAQQLSQTPQAQIQAQFQTQMPHPQPLQQPSFPS
         QQQ  + P +Q   Q   QL   Q L Q PQ Q+Q Q+Q Q      LQQP + S
Subjt:  -QQQKPQPPVLQPHNQPHPQLLSAQQLSQTPQAQIQAQFQTQMPHPQPLQQPSFPS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCTTCACAAGAGTCACCTGGCTTAGGTGGGCAGCTGCCTGTATCTCAGGCTATGGCCCAGCTGGGCGCCTCATCTTCAGCAGCTACACAGGCTCCTTTGAGTGTGAACTT
ACAATCCCATGCTGTTTCAGCTGCTAATCAACAGCAGCTTCCAGCTCCAGTTCAACCACATCAGAATTCACCTTCTCAGTTAGCTCATATGCTGTCGCAACAAAAACAAA
CTCTGCAGGCTAGTTTTCAGTCTTCCCAGCAGGCATTCTCTCAGCTACAGCAGCAGTTGCAGCTGATACAACCATCAAACCAAAGTTCAGCACTGCATCAGAGTTCCCAG
GCTATTAAGCAACAGTCGCACTGGGTGGGGGTTGTTTCACAGTCAACTGCCAGTGCCACGTCTTCTGTCACTTCAGATACACATTCATCTACAGTTGTTCCTCCTGCAAC
AATAAATACCCAAGTTGTAGCTCCTTTGAAATGCAATTGGACAGAGCACACTTCTCCTGATGGTTACAAATATTATTATAATAGTGTAACTGGTGAGAGCAAGTGGGAGA
GACCTGAAGAGCTTGCGGCAATTGAACAACAGCAAAAGCCACAGCCACCAGTACTGCAGCCTCATAACCAGCCACATCCTCAACTACTATCTGCCCAGCAACTCTCTCAA
ACTCCGCAAGCCCAGATTCAAGCCCAATTCCAGACACAGATGCCTCACCCTCAGCCGCTACAGCAACCTTCATTCCCTTCA
mRNA sequenceShow/hide mRNA sequence
CCTTCACAAGAGTCACCTGGCTTAGGTGGGCAGCTGCCTGTATCTCAGGCTATGGCCCAGCTGGGCGCCTCATCTTCAGCAGCTACACAGGCTCCTTTGAGTGTGAACTT
ACAATCCCATGCTGTTTCAGCTGCTAATCAACAGCAGCTTCCAGCTCCAGTTCAACCACATCAGAATTCACCTTCTCAGTTAGCTCATATGCTGTCGCAACAAAAACAAA
CTCTGCAGGCTAGTTTTCAGTCTTCCCAGCAGGCATTCTCTCAGCTACAGCAGCAGTTGCAGCTGATACAACCATCAAACCAAAGTTCAGCACTGCATCAGAGTTCCCAG
GCTATTAAGCAACAGTCGCACTGGGTGGGGGTTGTTTCACAGTCAACTGCCAGTGCCACGTCTTCTGTCACTTCAGATACACATTCATCTACAGTTGTTCCTCCTGCAAC
AATAAATACCCAAGTTGTAGCTCCTTTGAAATGCAATTGGACAGAGCACACTTCTCCTGATGGTTACAAATATTATTATAATAGTGTAACTGGTGAGAGCAAGTGGGAGA
GACCTGAAGAGCTTGCGGCAATTGAACAACAGCAAAAGCCACAGCCACCAGTACTGCAGCCTCATAACCAGCCACATCCTCAACTACTATCTGCCCAGCAACTCTCTCAA
ACTCCGCAAGCCCAGATTCAAGCCCAATTCCAGACACAGATGCCTCACCCTCAGCCGCTACAGCAACCTTCATTCCCTTCA
Protein sequenceShow/hide protein sequence
PSQESPGLGGQLPVSQAMAQLGASSSAATQAPLSVNLQSHAVSAANQQQLPAPVQPHQNSPSQLAHMLSQQKQTLQASFQSSQQAFSQLQQQLQLIQPSNQSSALHQSSQ
AIKQQSHWVGVVSQSTASATSSVTSDTHSSTVVPPATINTQVVAPLKCNWTEHTSPDGYKYYYNSVTGESKWERPEELAAIEQQQKPQPPVLQPHNQPHPQLLSAQQLSQ
TPQAQIQAQFQTQMPHPQPLQQPSFPS