| GenBank top hits | e value | %identity | Alignment |
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| KAG6594021.1 Flowering time control protein FCA, partial [Cucurbita argyrosperma subsp. sororia] | 3.2e-59 | 75.43 | Show/hide |
Query: SKLDRHRGDRYG--HGSGPDRHSGPPSRFSDSPLNHHDTRRTPLP---------GPHRRPFDSPPRYSTPPPAPAPAGFRPMGAPAGGFRPIPGSAAAFG
+KLDRHRGDRYG S P RHS PSRFSDSP+NHHD+RR+P G HRRPFDSPPRYST A A FRPMG AGGFRPIPG+ FG
Subjt: SKLDRHRGDRYG--HGSGPDRHSGPPSRFSDSPLNHHDTRRTPLP---------GPHRRPFDSPPRYSTPPPAPAPAGFRPMGAPAGGFRPIPGSAAAFG
Query: SNFQPPPVAGQKRGYPFSARGSSPDHPDGSNFAKLFVGSVPRTATEEEIRPLFEEHGNVIEVALIKDKRTGQQQG
SNFQPPPVAGQKRGY FS RGSSPDH DGS+FAKLFVGSVPRT TEE IRPLFEEHGNVIEVALIKDKRTGQQQG
Subjt: SNFQPPPVAGQKRGYPFSARGSSPDHPDGSNFAKLFVGSVPRTATEEEIRPLFEEHGNVIEVALIKDKRTGQQQG
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| KAG7013692.1 Flowering time control protein FCA [Cucurbita argyrosperma subsp. argyrosperma] | 3.5e-45 | 71.33 | Show/hide |
Query: LNHHDTRRTP------LPGPHRRPFDSPPRYSTPPPAPAPAGFRPMGAPAGGFRPIPGSAAAFGSNFQPPPVAGQKRGYPFSARGSSPDHPDGSNFAKLF
+NH D+R +P + G +RRPFDSPPR+ST P A FRPMG GGFRPIPG+ FGS+FQPPPVAGQKRGYPF+ RGSSPDH D S+FAKLF
Subjt: LNHHDTRRTP------LPGPHRRPFDSPPRYSTPPPAPAPAGFRPMGAPAGGFRPIPGSAAAFGSNFQPPPVAGQKRGYPFSARGSSPDHPDGSNFAKLF
Query: VGSVPRTATEEEIRPLFEEHGNVIEVALIKDKRTGQQQGFERL
VGSVPRT TEE+IRPLFEEHGNVIEVALIKDKRTGQQQG L
Subjt: VGSVPRTATEEEIRPLFEEHGNVIEVALIKDKRTGQQQGFERL
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| XP_022959133.1 flowering time control protein FCA-like isoform X3 [Cucurbita moschata] | 4.5e-45 | 72.66 | Show/hide |
Query: LNHHDTRRTP------LPGPHRRPFDSPPRYSTPPPAPAPAGFRPMGAPAGGFRPIPGSAAAFGSNFQPPPVAGQKRGYPFSARGSSPDHPDGSNFAKLF
+NH D+R +P + G +RRPFDSPPR+ST P A FRPMG GGFRPIPG+ FGS+FQPPPVAGQKRGYPF+ RGSSPDH D S+FAKLF
Subjt: LNHHDTRRTP------LPGPHRRPFDSPPRYSTPPPAPAPAGFRPMGAPAGGFRPIPGSAAAFGSNFQPPPVAGQKRGYPFSARGSSPDHPDGSNFAKLF
Query: VGSVPRTATEEEIRPLFEEHGNVIEVALIKDKRTGQQQG
VGSVPRT TEE+IRPLFEEHGNVIEVALIKDKRTGQQQG
Subjt: VGSVPRTATEEEIRPLFEEHGNVIEVALIKDKRTGQQQG
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| XP_022959134.1 flowering time control protein FCA-like isoform X4 [Cucurbita moschata] | 4.5e-45 | 72.66 | Show/hide |
Query: LNHHDTRRTP------LPGPHRRPFDSPPRYSTPPPAPAPAGFRPMGAPAGGFRPIPGSAAAFGSNFQPPPVAGQKRGYPFSARGSSPDHPDGSNFAKLF
+NH D+R +P + G +RRPFDSPPR+ST P A FRPMG GGFRPIPG+ FGS+FQPPPVAGQKRGYPF+ RGSSPDH D S+FAKLF
Subjt: LNHHDTRRTP------LPGPHRRPFDSPPRYSTPPPAPAPAGFRPMGAPAGGFRPIPGSAAAFGSNFQPPPVAGQKRGYPFSARGSSPDHPDGSNFAKLF
Query: VGSVPRTATEEEIRPLFEEHGNVIEVALIKDKRTGQQQG
VGSVPRT TEE+IRPLFEEHGNVIEVALIKDKRTGQQQG
Subjt: VGSVPRTATEEEIRPLFEEHGNVIEVALIKDKRTGQQQG
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| XP_023000619.1 flowering time control protein FCA-like [Cucurbita maxima] | 8.8e-57 | 73.56 | Show/hide |
Query: SKLDRHRGDRYG--HGSGPDRHSGPPSRFSDSPLNHHDTRRTPLP--------GPHRRPFDSPPRYSTPPPAPAPAGFRPMGAPAGGFRPIPGSAAAFGS
+KLDRHRGDRYG S P RHS PSRFSDSP+NHH +RR+P G HRRPFDSPP YSTP A A FRP+G GFRPIPG+ FGS
Subjt: SKLDRHRGDRYG--HGSGPDRHSGPPSRFSDSPLNHHDTRRTPLP--------GPHRRPFDSPPRYSTPPPAPAPAGFRPMGAPAGGFRPIPGSAAAFGS
Query: NFQPPPVAGQKRGYPFSARGSSPDHPDGSNFAKLFVGSVPRTATEEEIRPLFEEHGNVIEVALIKDKRTGQQQG
NFQPPPVAGQKRGYPFS GSSPDH DGS+FAKLFVGSVPRT TEE+IRPLFEEHGNVIEVALIKDKRTGQQQG
Subjt: NFQPPPVAGQKRGYPFSARGSSPDHPDGSNFAKLFVGSVPRTATEEEIRPLFEEHGNVIEVALIKDKRTGQQQG
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A6J1H3Q0 flowering time control protein FCA-like isoform X2 | 2.2e-45 | 72.66 | Show/hide |
Query: LNHHDTRRTP------LPGPHRRPFDSPPRYSTPPPAPAPAGFRPMGAPAGGFRPIPGSAAAFGSNFQPPPVAGQKRGYPFSARGSSPDHPDGSNFAKLF
+NH D+R +P + G +RRPFDSPPR+ST P A FRPMG GGFRPIPG+ FGS+FQPPPVAGQKRGYPF+ RGSSPDH D S+FAKLF
Subjt: LNHHDTRRTP------LPGPHRRPFDSPPRYSTPPPAPAPAGFRPMGAPAGGFRPIPGSAAAFGSNFQPPPVAGQKRGYPFSARGSSPDHPDGSNFAKLF
Query: VGSVPRTATEEEIRPLFEEHGNVIEVALIKDKRTGQQQG
VGSVPRT TEE+IRPLFEEHGNVIEVALIKDKRTGQQQG
Subjt: VGSVPRTATEEEIRPLFEEHGNVIEVALIKDKRTGQQQG
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| A0A6J1H400 flowering time control protein FCA-like isoform X1 | 2.2e-45 | 72.66 | Show/hide |
Query: LNHHDTRRTP------LPGPHRRPFDSPPRYSTPPPAPAPAGFRPMGAPAGGFRPIPGSAAAFGSNFQPPPVAGQKRGYPFSARGSSPDHPDGSNFAKLF
+NH D+R +P + G +RRPFDSPPR+ST P A FRPMG GGFRPIPG+ FGS+FQPPPVAGQKRGYPF+ RGSSPDH D S+FAKLF
Subjt: LNHHDTRRTP------LPGPHRRPFDSPPRYSTPPPAPAPAGFRPMGAPAGGFRPIPGSAAAFGSNFQPPPVAGQKRGYPFSARGSSPDHPDGSNFAKLF
Query: VGSVPRTATEEEIRPLFEEHGNVIEVALIKDKRTGQQQG
VGSVPRT TEE+IRPLFEEHGNVIEVALIKDKRTGQQQG
Subjt: VGSVPRTATEEEIRPLFEEHGNVIEVALIKDKRTGQQQG
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| A0A6J1H531 flowering time control protein FCA-like isoform X3 | 2.2e-45 | 72.66 | Show/hide |
Query: LNHHDTRRTP------LPGPHRRPFDSPPRYSTPPPAPAPAGFRPMGAPAGGFRPIPGSAAAFGSNFQPPPVAGQKRGYPFSARGSSPDHPDGSNFAKLF
+NH D+R +P + G +RRPFDSPPR+ST P A FRPMG GGFRPIPG+ FGS+FQPPPVAGQKRGYPF+ RGSSPDH D S+FAKLF
Subjt: LNHHDTRRTP------LPGPHRRPFDSPPRYSTPPPAPAPAGFRPMGAPAGGFRPIPGSAAAFGSNFQPPPVAGQKRGYPFSARGSSPDHPDGSNFAKLF
Query: VGSVPRTATEEEIRPLFEEHGNVIEVALIKDKRTGQQQG
VGSVPRT TEE+IRPLFEEHGNVIEVALIKDKRTGQQQG
Subjt: VGSVPRTATEEEIRPLFEEHGNVIEVALIKDKRTGQQQG
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| A0A6J1H743 flowering time control protein FCA-like isoform X4 | 2.2e-45 | 72.66 | Show/hide |
Query: LNHHDTRRTP------LPGPHRRPFDSPPRYSTPPPAPAPAGFRPMGAPAGGFRPIPGSAAAFGSNFQPPPVAGQKRGYPFSARGSSPDHPDGSNFAKLF
+NH D+R +P + G +RRPFDSPPR+ST P A FRPMG GGFRPIPG+ FGS+FQPPPVAGQKRGYPF+ RGSSPDH D S+FAKLF
Subjt: LNHHDTRRTP------LPGPHRRPFDSPPRYSTPPPAPAPAGFRPMGAPAGGFRPIPGSAAAFGSNFQPPPVAGQKRGYPFSARGSSPDHPDGSNFAKLF
Query: VGSVPRTATEEEIRPLFEEHGNVIEVALIKDKRTGQQQG
VGSVPRT TEE+IRPLFEEHGNVIEVALIKDKRTGQQQG
Subjt: VGSVPRTATEEEIRPLFEEHGNVIEVALIKDKRTGQQQG
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| A0A6J1KKH9 flowering time control protein FCA-like | 4.3e-57 | 73.56 | Show/hide |
Query: SKLDRHRGDRYG--HGSGPDRHSGPPSRFSDSPLNHHDTRRTPLP--------GPHRRPFDSPPRYSTPPPAPAPAGFRPMGAPAGGFRPIPGSAAAFGS
+KLDRHRGDRYG S P RHS PSRFSDSP+NHH +RR+P G HRRPFDSPP YSTP A A FRP+G GFRPIPG+ FGS
Subjt: SKLDRHRGDRYG--HGSGPDRHSGPPSRFSDSPLNHHDTRRTPLP--------GPHRRPFDSPPRYSTPPPAPAPAGFRPMGAPAGGFRPIPGSAAAFGS
Query: NFQPPPVAGQKRGYPFSARGSSPDHPDGSNFAKLFVGSVPRTATEEEIRPLFEEHGNVIEVALIKDKRTGQQQG
NFQPPPVAGQKRGYPFS GSSPDH DGS+FAKLFVGSVPRT TEE+IRPLFEEHGNVIEVALIKDKRTGQQQG
Subjt: NFQPPPVAGQKRGYPFSARGSSPDHPDGSNFAKLFVGSVPRTATEEEIRPLFEEHGNVIEVALIKDKRTGQQQG
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| A0JM51 CUGBP Elav-like family member 5 | 2.5e-06 | 32.98 | Show/hide |
Query: QPPPVAGQKRGYPFSARGSSPDHPDGS---NFAKLFVGSVPRTATEEEIRPLFEEHGNVIEVALIKDKRTGQQQGFERLEEIVSSSQFVFATSL
Q PP Q R P S D + KLFVG +PR E++++PLFE+ G + E+ ++KD+ TG +G L S T+L
Subjt: QPPPVAGQKRGYPFSARGSSPDHPDGS---NFAKLFVGSVPRTATEEEIRPLFEEHGNVIEVALIKDKRTGQQQGFERLEEIVSSSQFVFATSL
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| B8BCZ8 Flowering time control protein FCA | 2.4e-17 | 49.02 | Show/hide |
Query: FRPMGAPA-----GGFRPIPGSAAAFGSNFQPPPVAGQKRGYPFSARGSSPDHPDGSNFAKLFVGSVPRTATEEEIRPLFEEHGNVIEVALIKDKRTGQQ
F P P+ GG+R G +G P +G + Y S RG DH + +N+ KLF+GSVPRTATE+++RPLFEEHG+V+EVALIKD++TG+Q
Subjt: FRPMGAPA-----GGFRPIPGSAAAFGSNFQPPPVAGQKRGYPFSARGSSPDHPDGSNFAKLFVGSVPRTATEEEIRPLFEEHGNVIEVALIKDKRTGQQ
Query: QG
QG
Subjt: QG
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| O04425 Flowering time control protein FCA | 5.2e-20 | 41.57 | Show/hide |
Query: SGPPSRFSDSPLNHHDTRRTPLPGPHRRPFDSPPRYSTPPPAPAPAGFRPMGAPAG----GFRPIPGSAAAFGSNFQP----------------------
+GPP R P+ GPH P ++ GFRPMG G G R I G+ + + + P
Subjt: SGPPSRFSDSPLNHHDTRRTPLPGPHRRPFDSPPRYSTPPPAPAPAGFRPMGAPAG----GFRPIPGSAAAFGSNFQP----------------------
Query: ------PPVAGQKRGYPFSARGS--SPDHPDGSNFAKLFVGSVPRTATEEEIRPLFEEHGNVIEVALIKDKRTGQQQG
P++GQKRGYP S GS D D S+ KLFVGSVPRTATEEEIRP FE+HGNV+EVALIKDKRTGQQQG
Subjt: ------PPVAGQKRGYPFSARGS--SPDHPDGSNFAKLFVGSVPRTATEEEIRPLFEEHGNVIEVALIKDKRTGQQQG
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| Q6K271 Flowering time control protein FCA | 2.4e-17 | 49.02 | Show/hide |
Query: FRPMGAPA-----GGFRPIPGSAAAFGSNFQPPPVAGQKRGYPFSARGSSPDHPDGSNFAKLFVGSVPRTATEEEIRPLFEEHGNVIEVALIKDKRTGQQ
F P P+ GG+R G +G P +G + Y S RG DH + +N+ KLF+GSVPRTATE+++RPLFEEHG+V+EVALIKD++TG+Q
Subjt: FRPMGAPA-----GGFRPIPGSAAAFGSNFQPPPVAGQKRGYPFSARGSSPDHPDGSNFAKLFVGSVPRTATEEEIRPLFEEHGNVIEVALIKDKRTGQQ
Query: QG
QG
Subjt: QG
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| Q6PF35 CUGBP Elav-like family member 1-B | 5.6e-06 | 47.06 | Show/hide |
Query: PDHPDGSNFAKLFVGSVPRTATEEEIRPLFEEHGNVIEVALIKDKRTGQQQ
PDHPD S+ K+FVG VPR+ +E+E+R LFE++G V E+ +++D+ Q
Subjt: PDHPDGSNFAKLFVGSVPRTATEEEIRPLFEEHGNVIEVALIKDKRTGQQQ
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT3G13224.1 RNA-binding (RRM/RBD/RNP motifs) family protein | 2.0e-06 | 34.38 | Show/hide |
Query: KLFVGSVPRTATEEEIRPLFEEHGNVIEVALIKDKRTGQQQGF--------ERLEEIVSSSQFV
K+FVG +P T TE+E++ F ++GNV+E +I+D T + +GF E ++E++S +
Subjt: KLFVGSVPRTATEEEIRPLFEEHGNVIEVALIKDKRTGQQQGF--------ERLEEIVSSSQFV
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| AT3G13224.2 RNA-binding (RRM/RBD/RNP motifs) family protein | 2.0e-06 | 34.38 | Show/hide |
Query: KLFVGSVPRTATEEEIRPLFEEHGNVIEVALIKDKRTGQQQGF--------ERLEEIVSSSQFV
K+FVG +P T TE+E++ F ++GNV+E +I+D T + +GF E ++E++S +
Subjt: KLFVGSVPRTATEEEIRPLFEEHGNVIEVALIKDKRTGQQQGF--------ERLEEIVSSSQFV
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| AT4G16280.2 RNA binding;abscisic acid binding | 3.7e-21 | 41.57 | Show/hide |
Query: SGPPSRFSDSPLNHHDTRRTPLPGPHRRPFDSPPRYSTPPPAPAPAGFRPMGAPAG----GFRPIPGSAAAFGSNFQP----------------------
+GPP R P+ GPH P ++ GFRPMG G G R I G+ + + + P
Subjt: SGPPSRFSDSPLNHHDTRRTPLPGPHRRPFDSPPRYSTPPPAPAPAGFRPMGAPAG----GFRPIPGSAAAFGSNFQP----------------------
Query: ------PPVAGQKRGYPFSARGS--SPDHPDGSNFAKLFVGSVPRTATEEEIRPLFEEHGNVIEVALIKDKRTGQQQG
P++GQKRGYP S GS D D S+ KLFVGSVPRTATEEEIRP FE+HGNV+EVALIKDKRTGQQQG
Subjt: ------PPVAGQKRGYPFSARGS--SPDHPDGSNFAKLFVGSVPRTATEEEIRPLFEEHGNVIEVALIKDKRTGQQQG
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| AT4G16280.3 RNA binding;abscisic acid binding | 3.7e-21 | 41.57 | Show/hide |
Query: SGPPSRFSDSPLNHHDTRRTPLPGPHRRPFDSPPRYSTPPPAPAPAGFRPMGAPAG----GFRPIPGSAAAFGSNFQP----------------------
+GPP R P+ GPH P ++ GFRPMG G G R I G+ + + + P
Subjt: SGPPSRFSDSPLNHHDTRRTPLPGPHRRPFDSPPRYSTPPPAPAPAGFRPMGAPAG----GFRPIPGSAAAFGSNFQP----------------------
Query: ------PPVAGQKRGYPFSARGS--SPDHPDGSNFAKLFVGSVPRTATEEEIRPLFEEHGNVIEVALIKDKRTGQQQG
P++GQKRGYP S GS D D S+ KLFVGSVPRTATEEEIRP FE+HGNV+EVALIKDKRTGQQQG
Subjt: ------PPVAGQKRGYPFSARGS--SPDHPDGSNFAKLFVGSVPRTATEEEIRPLFEEHGNVIEVALIKDKRTGQQQG
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| AT4G16280.4 RNA binding;abscisic acid binding | 1.5e-22 | 74.65 | Show/hide |
Query: PVAGQKRGYPFSARGS--SPDHPDGSNFAKLFVGSVPRTATEEEIRPLFEEHGNVIEVALIKDKRTGQQQG
P++GQKRGYP S GS D D S+ KLFVGSVPRTATEEEIRP FE+HGNV+EVALIKDKRTGQQQG
Subjt: PVAGQKRGYPFSARGS--SPDHPDGSNFAKLFVGSVPRTATEEEIRPLFEEHGNVIEVALIKDKRTGQQQG
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