; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS019362 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019362
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description30S ribosomal S6
Genome locationscaffold611:619089..620915
RNA-Seq ExpressionMS019362
SyntenyMS019362
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0070181 - small ribosomal subunit rRNA binding (molecular function)
InterPro domainsIPR000529 - Ribosomal protein S6
IPR014717 - Translation elongation factor EF1B/ribosomal protein S6
IPR020814 - Ribosomal protein S6, plastid/chloroplast
IPR020815 - Ribosomal protein S6, conserved site
IPR035980 - Ribosomal protein S6 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022138319.1 putative vacuolar protein sorting-associated protein 13F [Momordica charantia]1.5e-17299.39Show/hide
Query:  MESLPFSSASMAYPAAALKIHAVALPNGFWETRNRCCVFPNLYSSFRTLKLPTGFTRKSAIVAAKKTHANTNKEDTHRSVPRPDESTRFFPEAVLLKEKR
        MESLPFSSASMAYPAAALKIHAVALPNGFWETRNRCCVFPNLYSSFRTLKLPTGFTRKSAIVAAKKTHANTNKEDTHRSVPRPDESTRFFPEAVLLKEKR
Subjt:  MESLPFSSASMAYPAAALKIHAVALPNGFWETRNRCCVFPNLYSSFRTLKLPTGFTRKSAIVAAKKTHANTNKEDTHRSVPRPDESTRFFPEAVLLKEKR

Query:  VAEDGKFLPEFADAEEEELYEYLNLQLESESKVEEMRHYEVVYLIHEKNAEEVETVNVKVQEFLREKKGKVWRLSDWGMRRLAYKIKKAKYAHYILMNFE
        VAEDGKFLPEFADAEEEELYEYLNLQLESESKVEEMRHYEVVYLIHEKNAEEVETVNVKVQEFLREKKGKVWRLSDWGMRRLAYKIKKAKYAHYILMNFE
Subjt:  VAEDGKFLPEFADAEEEELYEYLNLQLESESKVEEMRHYEVVYLIHEKNAEEVETVNVKVQEFLREKKGKVWRLSDWGMRRLAYKIKKAKYAHYILMNFE

Query:  LEAKWINEFKSMLDMDERIIRHLVIKRDAAITEDCPPPPEFHTLRAGVDDDSEEDEMDDYESEDEMDWD--DEDEDEDELDDYGDDIEDGVIVVNTVDDE
        LEAKWINEFKSMLDMDERIIRHLVIKRDAAITEDCPPPPEFHTLRAGVDDDSEEDEMDDYESEDEMDWD  DEDEDEDELDDYGDDIEDGVIVVNTVDDE
Subjt:  LEAKWINEFKSMLDMDERIIRHLVIKRDAAITEDCPPPPEFHTLRAGVDDDSEEDEMDDYESEDEMDWD--DEDEDEDELDDYGDDIEDGVIVVNTVDDE

Query:  DDDDDGGGSKAYKSAATGNRGSRNRRSE
        DDDDDGGGSKAYKSAATGNRGSRNRRSE
Subjt:  DDDDDGGGSKAYKSAATGNRGSRNRRSE

XP_022959140.1 putative vacuolar protein sorting-associated protein 13F [Cucurbita moschata]1.8e-11774.55Show/hide
Query:  MESLPF--SSASMAYPAAALKIHAVALPNGFWETRNRCCVFPNLYSSFRTLKLPTGFTRKSAIVAAKKTHANTNKEDTHRSVPRPDESTRFFPEAVLLKE
        M++L F  S +S AYP  +LK   +   NGFW +R     FPN+ SSFRTL LPTGF RKS +VAAKKT  N+NK+D HRSVP+PDE+T FFPEAVLLKE
Subjt:  MESLPF--SSASMAYPAAALKIHAVALPNGFWETRNRCCVFPNLYSSFRTLKLPTGFTRKSAIVAAKKTHANTNKEDTHRSVPRPDESTRFFPEAVLLKE

Query:  KRVAEDGKFLPEFADAEEEELYEYLNLQLESESKVEEMRHYEVVYLIHEKNAEEVETVNVKVQEFLREKKGKVWRLSDWGMRRLAYKIKKAKYAHYILMN
        KRVAEDG+FLPEFADAEEE+LYEYLNLQLESESKV +MRHYEVV+LIHEKNAEEVE+VN KV  F+REKKGK+WRLSDWGMRRLAYKIKKA YAHYILMN
Subjt:  KRVAEDGKFLPEFADAEEEELYEYLNLQLESESKVEEMRHYEVVYLIHEKNAEEVETVNVKVQEFLREKKGKVWRLSDWGMRRLAYKIKKAKYAHYILMN

Query:  FELEAKWINEFKSMLDMDERIIRHLVIKRDAAITEDCPPPPEFHTLRAGVD--DDSEEDEMDDYESEDEMDWDDEDEDEDELDDYGDDIEDGVIVVNTVD
        FELEAKWINEFKSMLDMDER+IRHLVIKRDAAITEDCPPPPEFHTLRAG D  ++ EE++MDDY+SEDE+DWD     EDELDDYGDDIEDG+I+V    
Subjt:  FELEAKWINEFKSMLDMDERIIRHLVIKRDAAITEDCPPPPEFHTLRAGVD--DDSEEDEMDDYESEDEMDWDDEDEDEDELDDYGDDIEDGVIVVNTVD

Query:  DEDDDDDGGGSKAYKSAATGNRGSRNRRSE
        D DDDDD  GSKA KS+A G+R  RNR  E
Subjt:  DEDDDDDGGGSKAYKSAATGNRGSRNRRSE

XP_023006617.1 uncharacterized protein LOC111499293 isoform X1 [Cucurbita maxima]5.1e-12076.62Show/hide
Query:  MESLPFS-SASMAYPAAALKIHAVALPNGFWETRNRCCVFPNLYSSFRTLKLPTGFTRKSAIVAAKKTHANTNKEDTHRSVPRPDESTRFFPEAVLLKEK
        M++L FS S+S AYP  +LK   +   NGFW +R+    FPN+ SSFRTL LPTGF RKSAIVAAKKT  NTNK+D+HRSVP+PDE+T FFPEAVLLKEK
Subjt:  MESLPFS-SASMAYPAAALKIHAVALPNGFWETRNRCCVFPNLYSSFRTLKLPTGFTRKSAIVAAKKTHANTNKEDTHRSVPRPDESTRFFPEAVLLKEK

Query:  RVAEDGKFLPEFADAEEEELYEYLNLQLESESKVEEMRHYEVVYLIHEKNAEEVETVNVKVQEFLREKKGKVWRLSDWGMRRLAYKIKKAKYAHYILMNF
        RVAEDG+FLPEFADAEEE+LYEYLNLQLESESKV +MRHYEVV+LIHEKNAEEVE+VN KVQ F+REKKGK+WRLSDWGMRRLAYKIKKA YAHYILMNF
Subjt:  RVAEDGKFLPEFADAEEEELYEYLNLQLESESKVEEMRHYEVVYLIHEKNAEEVETVNVKVQEFLREKKGKVWRLSDWGMRRLAYKIKKAKYAHYILMNF

Query:  ELEAKWINEFKSMLDMDERIIRHLVIKRDAAITEDCPPPPEFHTLRAGVD--DDSEEDEMDDYESEDEMDWDDEDEDEDELDDYGDDIEDGVIVVNTVDD
        ELEAKWINEFKSMLDMDER+IRHLVIKRDAAITEDCPPPPEFHTLRAG D  ++ EE++MDDY+SED +DWD     EDELDDYGDDIEDG+I+V     
Subjt:  ELEAKWINEFKSMLDMDERIIRHLVIKRDAAITEDCPPPPEFHTLRAGVD--DDSEEDEMDDYESEDEMDWDDEDEDEDELDDYGDDIEDGVIVVNTVDD

Query:  EDDDDDGGGSKAYKSAATGNRGSRN
          DDDD  GSKA KSAA GNRG RN
Subjt:  EDDDDDGGGSKAYKSAATGNRGSRN

XP_023006618.1 uncharacterized protein LOC111499293 isoform X2 [Cucurbita maxima]1.6e-11876.66Show/hide
Query:  MESLPFS-SASMAYPAAALKIHAVALPNGFWETRNRCCVFPNLYSSFRTLKLPTGFTRKSAIVAAKKTHANTNKEDTHRSVPRPDESTRFFPEAVLLKEK
        M++L FS S+S AYP  +LK   +   NGFW +R+    FPN+ SSFRTL LPTGF RKSAIVAAKKT  NTNK+D+HRSVP+PDE+T FFPEAVLLKEK
Subjt:  MESLPFS-SASMAYPAAALKIHAVALPNGFWETRNRCCVFPNLYSSFRTLKLPTGFTRKSAIVAAKKTHANTNKEDTHRSVPRPDESTRFFPEAVLLKEK

Query:  RVAEDGKFLPEFADAEEEELYEYLNLQLESESKVEEMRHYEVVYLIHEKNAEEVETVNVKVQEFLREKKGKVWRLSDWGMRRLAYKIKKAKYAHYILMNF
        RVAEDG+FLPEFADAEEE+LYEYLNLQLESESKV +MRHYEVV+LIHEKNAEEVE+VN KVQ F+REKKGK+WRLSDWGMRRLAYKIKKA YAHYILMNF
Subjt:  RVAEDGKFLPEFADAEEEELYEYLNLQLESESKVEEMRHYEVVYLIHEKNAEEVETVNVKVQEFLREKKGKVWRLSDWGMRRLAYKIKKAKYAHYILMNF

Query:  ELEAKWINEFKSMLDMDERIIRHLVIKRDAAITEDCPPPPEFHTLRAGVD--DDSEEDEMDDYESEDEMDWDDEDEDEDELDDYGDDIEDGVIVVNTVDD
        ELEAKWINEFKSMLDMDER+IRHLVIKRDAAITEDCPPPPEFHTLRAG D  ++ EE++MDDY+SED +DWD     EDELDDYGDDIEDG+I+V     
Subjt:  ELEAKWINEFKSMLDMDERIIRHLVIKRDAAITEDCPPPPEFHTLRAGVD--DDSEEDEMDDYESEDEMDWDDEDEDEDELDDYGDDIEDGVIVVNTVDD

Query:  EDDDDDGGGSKAYKSAA
          DDDD  GSKA KSAA
Subjt:  EDDDDDGGGSKAYKSAA

XP_023548157.1 coiled-coil domain-containing protein 1 [Cucurbita pepo subsp. pepo]1.4e-11774.7Show/hide
Query:  MESLPFS-SASMAYPAAALKIHAVALPNGFWETRNRCCVFPNLYSSFRTLKLPTGFTRKSAIVAAKKTHANTNKEDTHRSVPRPDESTRFFPEAVLLKEK
        M++L FS S+S AYP  +LK  ++   NGFW +R     FPN+ SSF TL  PTGF RKS +VAAKKT  N+NK+D HRSVP+PDE+T FFPEAVLLKEK
Subjt:  MESLPFS-SASMAYPAAALKIHAVALPNGFWETRNRCCVFPNLYSSFRTLKLPTGFTRKSAIVAAKKTHANTNKEDTHRSVPRPDESTRFFPEAVLLKEK

Query:  RVAEDGKFLPEFADAEEEELYEYLNLQLESESKVEEMRHYEVVYLIHEKNAEEVETVNVKVQEFLREKKGKVWRLSDWGMRRLAYKIKKAKYAHYILMNF
        RVAEDG+FLPEFADAEEE+LYEYLNLQLESESKV +MRHYEVV+LIHEKNAEEVE+VN KVQ F+REKKGK+WRLSDWGMRRLAYKIKKA YAHYILMNF
Subjt:  RVAEDGKFLPEFADAEEEELYEYLNLQLESESKVEEMRHYEVVYLIHEKNAEEVETVNVKVQEFLREKKGKVWRLSDWGMRRLAYKIKKAKYAHYILMNF

Query:  ELEAKWINEFKSMLDMDERIIRHLVIKRDAAITEDCPPPPEFHTLRAGVD--DDSEEDEMDDYESEDEMDWDDEDEDEDELDDYGDDIEDGVIVV--NTV
        ELEAKWINEFKSMLDMDER+IRHLVIKRDAAITEDCPPPPEFH+LRAG D  ++ EE++MDDY+SEDE+DWD     EDELDDYGDDIEDG+I+V  +  
Subjt:  ELEAKWINEFKSMLDMDERIIRHLVIKRDAAITEDCPPPPEFHTLRAGVD--DDSEEDEMDDYESEDEMDWDDEDEDEDELDDYGDDIEDGVIVV--NTV

Query:  DDEDDDDDGGGSKAYKSAATGNRGSRNR
        DD+DDDDD  GSKA KS+A G+R  RNR
Subjt:  DDEDDDDDGGGSKAYKSAATGNRGSRNR

TrEMBL top hitse value%identityAlignment
A0A1S3C7Q7 probable dual specificity protein phosphatase DDB_G02819631.4e-11071.12Show/hide
Query:  MESLPFSSASMAYPAAALKIH-AVALPNGFWETRN---RCCVFPNLYSSFRTLKLPTGFTRKSAIVAAKKTHANTNKEDTHRSVPRPDESTRFFPEAVLL
        M++L   S S +  + +  IH ++   N  +  RN       FPN+ SSF TL LPT F+RKS I+AAKKT+A  NK+D HRS+P+PDES  FFPEAVLL
Subjt:  MESLPFSSASMAYPAAALKIH-AVALPNGFWETRN---RCCVFPNLYSSFRTLKLPTGFTRKSAIVAAKKTHANTNKEDTHRSVPRPDESTRFFPEAVLL

Query:  KEKRVAEDGKFLPEFADAEEEELYEYLNLQLESESKVEEMRHYEVVYLIHEKNAEEVETVNVKVQEFLREKKGKVWRLSDWGMRRLAYKIKKAKYAHYIL
        KEK+VAEDG+FLPEFADAEEE+LYEYLNLQLESESKVE+MRHYEVV+LIHEKNAEEVE+V  KVQ FLREKKGKVWRLSDWGMRRLAYKIKKAKYAHYIL
Subjt:  KEKRVAEDGKFLPEFADAEEEELYEYLNLQLESESKVEEMRHYEVVYLIHEKNAEEVETVNVKVQEFLREKKGKVWRLSDWGMRRLAYKIKKAKYAHYIL

Query:  MNFELEAKWINEFKSMLDMDERIIRHLVIKRDAAITEDCPPPPEFHTLRAGV--DDDSEEDEMDDYESEDEMDWDDEDEDEDELDDYGDDIEDGVIVVNT
        MNFELEAKWINEFKSMLDMDER+IRHLVIKRD AITEDCPPPPEFHTLRAGV  DDD+EED+MDDY S DEMDWD    DEDELDDY D  +DG+I+V  
Subjt:  MNFELEAKWINEFKSMLDMDERIIRHLVIKRDAAITEDCPPPPEFHTLRAGV--DDDSEEDEMDDYESEDEMDWDDEDEDEDELDDYGDDIEDGVIVVNT

Query:  VDDEDDDDDGGGSKAYKSAATGNRGSRNR
           + D+DD   S   KS ATGN G RN+
Subjt:  VDDEDDDDDGGGSKAYKSAATGNRGSRNR

A0A6J1C9U0 putative vacuolar protein sorting-associated protein 13F7.3e-17399.39Show/hide
Query:  MESLPFSSASMAYPAAALKIHAVALPNGFWETRNRCCVFPNLYSSFRTLKLPTGFTRKSAIVAAKKTHANTNKEDTHRSVPRPDESTRFFPEAVLLKEKR
        MESLPFSSASMAYPAAALKIHAVALPNGFWETRNRCCVFPNLYSSFRTLKLPTGFTRKSAIVAAKKTHANTNKEDTHRSVPRPDESTRFFPEAVLLKEKR
Subjt:  MESLPFSSASMAYPAAALKIHAVALPNGFWETRNRCCVFPNLYSSFRTLKLPTGFTRKSAIVAAKKTHANTNKEDTHRSVPRPDESTRFFPEAVLLKEKR

Query:  VAEDGKFLPEFADAEEEELYEYLNLQLESESKVEEMRHYEVVYLIHEKNAEEVETVNVKVQEFLREKKGKVWRLSDWGMRRLAYKIKKAKYAHYILMNFE
        VAEDGKFLPEFADAEEEELYEYLNLQLESESKVEEMRHYEVVYLIHEKNAEEVETVNVKVQEFLREKKGKVWRLSDWGMRRLAYKIKKAKYAHYILMNFE
Subjt:  VAEDGKFLPEFADAEEEELYEYLNLQLESESKVEEMRHYEVVYLIHEKNAEEVETVNVKVQEFLREKKGKVWRLSDWGMRRLAYKIKKAKYAHYILMNFE

Query:  LEAKWINEFKSMLDMDERIIRHLVIKRDAAITEDCPPPPEFHTLRAGVDDDSEEDEMDDYESEDEMDWD--DEDEDEDELDDYGDDIEDGVIVVNTVDDE
        LEAKWINEFKSMLDMDERIIRHLVIKRDAAITEDCPPPPEFHTLRAGVDDDSEEDEMDDYESEDEMDWD  DEDEDEDELDDYGDDIEDGVIVVNTVDDE
Subjt:  LEAKWINEFKSMLDMDERIIRHLVIKRDAAITEDCPPPPEFHTLRAGVDDDSEEDEMDDYESEDEMDWD--DEDEDEDELDDYGDDIEDGVIVVNTVDDE

Query:  DDDDDGGGSKAYKSAATGNRGSRNRRSE
        DDDDDGGGSKAYKSAATGNRGSRNRRSE
Subjt:  DDDDDGGGSKAYKSAATGNRGSRNRRSE

A0A6J1H5G0 putative vacuolar protein sorting-associated protein 13F8.8e-11874.55Show/hide
Query:  MESLPF--SSASMAYPAAALKIHAVALPNGFWETRNRCCVFPNLYSSFRTLKLPTGFTRKSAIVAAKKTHANTNKEDTHRSVPRPDESTRFFPEAVLLKE
        M++L F  S +S AYP  +LK   +   NGFW +R     FPN+ SSFRTL LPTGF RKS +VAAKKT  N+NK+D HRSVP+PDE+T FFPEAVLLKE
Subjt:  MESLPF--SSASMAYPAAALKIHAVALPNGFWETRNRCCVFPNLYSSFRTLKLPTGFTRKSAIVAAKKTHANTNKEDTHRSVPRPDESTRFFPEAVLLKE

Query:  KRVAEDGKFLPEFADAEEEELYEYLNLQLESESKVEEMRHYEVVYLIHEKNAEEVETVNVKVQEFLREKKGKVWRLSDWGMRRLAYKIKKAKYAHYILMN
        KRVAEDG+FLPEFADAEEE+LYEYLNLQLESESKV +MRHYEVV+LIHEKNAEEVE+VN KV  F+REKKGK+WRLSDWGMRRLAYKIKKA YAHYILMN
Subjt:  KRVAEDGKFLPEFADAEEEELYEYLNLQLESESKVEEMRHYEVVYLIHEKNAEEVETVNVKVQEFLREKKGKVWRLSDWGMRRLAYKIKKAKYAHYILMN

Query:  FELEAKWINEFKSMLDMDERIIRHLVIKRDAAITEDCPPPPEFHTLRAGVD--DDSEEDEMDDYESEDEMDWDDEDEDEDELDDYGDDIEDGVIVVNTVD
        FELEAKWINEFKSMLDMDER+IRHLVIKRDAAITEDCPPPPEFHTLRAG D  ++ EE++MDDY+SEDE+DWD     EDELDDYGDDIEDG+I+V    
Subjt:  FELEAKWINEFKSMLDMDERIIRHLVIKRDAAITEDCPPPPEFHTLRAGVD--DDSEEDEMDDYESEDEMDWDDEDEDEDELDDYGDDIEDGVIVVNTVD

Query:  DEDDDDDGGGSKAYKSAATGNRGSRNRRSE
        D DDDDD  GSKA KS+A G+R  RNR  E
Subjt:  DEDDDDDGGGSKAYKSAATGNRGSRNRRSE

A0A6J1KWC1 uncharacterized protein LOC111499293 isoform X12.5e-12076.62Show/hide
Query:  MESLPFS-SASMAYPAAALKIHAVALPNGFWETRNRCCVFPNLYSSFRTLKLPTGFTRKSAIVAAKKTHANTNKEDTHRSVPRPDESTRFFPEAVLLKEK
        M++L FS S+S AYP  +LK   +   NGFW +R+    FPN+ SSFRTL LPTGF RKSAIVAAKKT  NTNK+D+HRSVP+PDE+T FFPEAVLLKEK
Subjt:  MESLPFS-SASMAYPAAALKIHAVALPNGFWETRNRCCVFPNLYSSFRTLKLPTGFTRKSAIVAAKKTHANTNKEDTHRSVPRPDESTRFFPEAVLLKEK

Query:  RVAEDGKFLPEFADAEEEELYEYLNLQLESESKVEEMRHYEVVYLIHEKNAEEVETVNVKVQEFLREKKGKVWRLSDWGMRRLAYKIKKAKYAHYILMNF
        RVAEDG+FLPEFADAEEE+LYEYLNLQLESESKV +MRHYEVV+LIHEKNAEEVE+VN KVQ F+REKKGK+WRLSDWGMRRLAYKIKKA YAHYILMNF
Subjt:  RVAEDGKFLPEFADAEEEELYEYLNLQLESESKVEEMRHYEVVYLIHEKNAEEVETVNVKVQEFLREKKGKVWRLSDWGMRRLAYKIKKAKYAHYILMNF

Query:  ELEAKWINEFKSMLDMDERIIRHLVIKRDAAITEDCPPPPEFHTLRAGVD--DDSEEDEMDDYESEDEMDWDDEDEDEDELDDYGDDIEDGVIVVNTVDD
        ELEAKWINEFKSMLDMDER+IRHLVIKRDAAITEDCPPPPEFHTLRAG D  ++ EE++MDDY+SED +DWD     EDELDDYGDDIEDG+I+V     
Subjt:  ELEAKWINEFKSMLDMDERIIRHLVIKRDAAITEDCPPPPEFHTLRAGVD--DDSEEDEMDDYESEDEMDWDDEDEDEDELDDYGDDIEDGVIVVNTVDD

Query:  EDDDDDGGGSKAYKSAATGNRGSRN
          DDDD  GSKA KSAA GNRG RN
Subjt:  EDDDDDGGGSKAYKSAATGNRGSRN

A0A6J1L5G1 uncharacterized protein LOC111499293 isoform X27.9e-11976.66Show/hide
Query:  MESLPFS-SASMAYPAAALKIHAVALPNGFWETRNRCCVFPNLYSSFRTLKLPTGFTRKSAIVAAKKTHANTNKEDTHRSVPRPDESTRFFPEAVLLKEK
        M++L FS S+S AYP  +LK   +   NGFW +R+    FPN+ SSFRTL LPTGF RKSAIVAAKKT  NTNK+D+HRSVP+PDE+T FFPEAVLLKEK
Subjt:  MESLPFS-SASMAYPAAALKIHAVALPNGFWETRNRCCVFPNLYSSFRTLKLPTGFTRKSAIVAAKKTHANTNKEDTHRSVPRPDESTRFFPEAVLLKEK

Query:  RVAEDGKFLPEFADAEEEELYEYLNLQLESESKVEEMRHYEVVYLIHEKNAEEVETVNVKVQEFLREKKGKVWRLSDWGMRRLAYKIKKAKYAHYILMNF
        RVAEDG+FLPEFADAEEE+LYEYLNLQLESESKV +MRHYEVV+LIHEKNAEEVE+VN KVQ F+REKKGK+WRLSDWGMRRLAYKIKKA YAHYILMNF
Subjt:  RVAEDGKFLPEFADAEEEELYEYLNLQLESESKVEEMRHYEVVYLIHEKNAEEVETVNVKVQEFLREKKGKVWRLSDWGMRRLAYKIKKAKYAHYILMNF

Query:  ELEAKWINEFKSMLDMDERIIRHLVIKRDAAITEDCPPPPEFHTLRAGVD--DDSEEDEMDDYESEDEMDWDDEDEDEDELDDYGDDIEDGVIVVNTVDD
        ELEAKWINEFKSMLDMDER+IRHLVIKRDAAITEDCPPPPEFHTLRAG D  ++ EE++MDDY+SED +DWD     EDELDDYGDDIEDG+I+V     
Subjt:  ELEAKWINEFKSMLDMDERIIRHLVIKRDAAITEDCPPPPEFHTLRAGVD--DDSEEDEMDDYESEDEMDWDDEDEDEDELDDYGDDIEDGVIVVNTVDD

Query:  EDDDDDGGGSKAYKSAA
          DDDD  GSKA KSAA
Subjt:  EDDDDDGGGSKAYKSAA

SwissProt top hitse value%identityAlignment
A9KFL5 30S ribosomal protein S68.4e-1744.9Show/hide
Query:  MRHYEVVYLIHEKNAEEVETVNVKVQEFLREKKGKVWRLSDWGMRRLAYKIKKAKYAHYILMNFELEAKWINEFKSMLDMDERIIRHLVIKRDAAITE
        MRHYE+V L+H   + +V  +  + Q  ++EK GKV RL DWG R+LAY I K   AHY+LMN E +   I+E ++    ++ +IR L++KRD AIT+
Subjt:  MRHYEVVYLIHEKNAEEVETVNVKVQEFLREKKGKVWRLSDWGMRRLAYKIKKAKYAHYILMNFELEAKWINEFKSMLDMDERIIRHLVIKRDAAITE

A9ND53 30S ribosomal protein S68.4e-1744.9Show/hide
Query:  MRHYEVVYLIHEKNAEEVETVNVKVQEFLREKKGKVWRLSDWGMRRLAYKIKKAKYAHYILMNFELEAKWINEFKSMLDMDERIIRHLVIKRDAAITE
        MRHYE+V L+H   + +V  +  + Q  ++EK GKV RL DWG R+LAY I K   AHY+LMN E +   I+E ++    ++ +IR L++KRD AIT+
Subjt:  MRHYEVVYLIHEKNAEEVETVNVKVQEFLREKKGKVWRLSDWGMRRLAYKIKKAKYAHYILMNFELEAKWINEFKSMLDMDERIIRHLVIKRDAAITE

B6J0J6 30S ribosomal protein S68.4e-1744.9Show/hide
Query:  MRHYEVVYLIHEKNAEEVETVNVKVQEFLREKKGKVWRLSDWGMRRLAYKIKKAKYAHYILMNFELEAKWINEFKSMLDMDERIIRHLVIKRDAAITE
        MRHYE+V L+H   + +V  +  + Q  ++EK GKV RL DWG R+LAY I K   AHY+LMN E +   I+E ++    ++ +IR L++KRD AIT+
Subjt:  MRHYEVVYLIHEKNAEEVETVNVKVQEFLREKKGKVWRLSDWGMRRLAYKIKKAKYAHYILMNFELEAKWINEFKSMLDMDERIIRHLVIKRDAAITE

B6J6T7 30S ribosomal protein S68.4e-1744.9Show/hide
Query:  MRHYEVVYLIHEKNAEEVETVNVKVQEFLREKKGKVWRLSDWGMRRLAYKIKKAKYAHYILMNFELEAKWINEFKSMLDMDERIIRHLVIKRDAAITE
        MRHYE+V L+H   + +V  +  + Q  ++EK GKV RL DWG R+LAY I K   AHY+LMN E +   I+E ++    ++ +IR L++KRD AIT+
Subjt:  MRHYEVVYLIHEKNAEEVETVNVKVQEFLREKKGKVWRLSDWGMRRLAYKIKKAKYAHYILMNFELEAKWINEFKSMLDMDERIIRHLVIKRDAAITE

Q0VMF9 30S ribosomal protein S63.8e-1741.58Show/hide
Query:  MRHYEVVYLIHEKNAEEVETVNVKVQEFLREKKGKVWRLSDWGMRRLAYKIKKAKYAHYILMNFELEAKWINEFKSMLDMDERIIRHLVIKRDAAITEDC
        MRHYEVV+L+H   +E+V  +  +    + + KG + R+ DWG R+LAY I K   AHY+++N E + + + E ++    ++ +IRHLVI+RD AITE  
Subjt:  MRHYEVVYLIHEKNAEEVETVNVKVQEFLREKKGKVWRLSDWGMRRLAYKIKKAKYAHYILMNFELEAKWINEFKSMLDMDERIIRHLVIKRDAAITEDC

Query:  P
        P
Subjt:  P

Arabidopsis top hitse value%identityAlignment
AT3G17170.1 Translation elongation factor EF1B/ribosomal protein S6 family protein4.7e-7157.89Show/hide
Query:  IVAAKKTHANTNKEDTHRSVPRPDESTRFFPEAVLLKEKRVAEDGKFLPEFADAEEEELYEYLNLQLESESKVEEMRHYEVVYLIHEKNAEEVETVNVKV
        + AAKK    + K+D H    RPDE+T  FPE++LLKEK++ E+G  LPEFADAEE+ELY++L+LQL+S+   E MRHYEVVYLIHEK+AEEVE++N KV
Subjt:  IVAAKKTHANTNKEDTHRSVPRPDESTRFFPEAVLLKEKRVAEDGKFLPEFADAEEEELYEYLNLQLESESKVEEMRHYEVVYLIHEKNAEEVETVNVKV

Query:  QEFLREKKGKVWRLSDWGMRRLAYKIKKAKYAHYILMNFELEAKWINEFKSMLDMDERIIRHLVIKRDAAITEDCPPPPEFHTLRAGVD--DDSEEDEMD
        Q++L+EKKGKVWR SDWGMRRLAYKI+KA+ AHYILMNFE+EAK++NEFK +LD DER+IRHLV+KRD AITEDCPPPPEFH++RAG +  DD EE+E++
Subjt:  QEFLREKKGKVWRLSDWGMRRLAYKIKKAKYAHYILMNFELEAKWINEFKSMLDMDERIIRHLVIKRDAAITEDCPPPPEFHTLRAGVD--DDSEEDEMD

Query:  DYESEDEMDWDDEDEDEDELDDYGDDIEDGVIVVNTVDDEDDDDDGGGSKAYKSAATGNRGSRNRR
          E EDE + +DE ED D ++   DD  + V+V+   ++E ++++ G S+  +       G R  R
Subjt:  DYESEDEMDWDDEDEDEDELDDYGDDIEDGVIVVNTVDDEDDDDDGGGSKAYKSAATGNRGSRNRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTCTCTGCCTTTCTCCTCTGCTTCTATGGCTTATCCTGCTGCTGCTTTAAAGATTCACGCTGTGGCTCTTCCAAATGGCTTCTGGGAAACGCGAAACCGTTGCTG
TGTTTTTCCGAACCTATACTCTTCCTTTCGCACTCTGAAGCTACCAACTGGATTTACAAGAAAATCCGCCATTGTCGCCGCAAAGAAGACCCATGCTAACACTAACAAGG
AAGATACTCACCGCTCCGTACCCAGACCTGATGAGTCTACGCGGTTTTTCCCTGAAGCTGTCCTGCTTAAGGAGAAAAGGGTTGCAGAAGATGGTAAATTCCTCCCTGAG
TTTGCTGATGCGGAAGAAGAAGAGCTTTATGAATATTTGAACCTTCAGTTGGAAAGTGAATCGAAAGTTGAAGAAATGCGTCACTATGAGGTGGTCTATTTAATTCATGA
GAAGAATGCAGAAGAGGTCGAGACTGTAAATGTGAAAGTTCAAGAGTTTTTAAGGGAGAAGAAAGGGAAGGTATGGAGACTGAGTGATTGGGGAATGCGAAGACTTGCAT
ACAAGATAAAGAAAGCTAAATATGCACATTACATATTGATGAATTTTGAACTGGAAGCCAAATGGATTAATGAATTTAAGAGCATGTTAGATATGGATGAAAGAATAATT
CGACATCTTGTGATTAAGAGAGATGCTGCTATCACAGAAGATTGCCCTCCACCTCCCGAGTTTCACACCCTTCGTGCAGGCGTAGATGATGACAGTGAAGAAGATGAGAT
GGATGATTATGAGAGCGAGGATGAAATGGATTGGGATGATGAGGATGAGGATGAGGATGAGTTGGATGATTATGGTGATGACATTGAGGATGGGGTTATTGTCGTCAACA
CTGTTGACGATGAGGATGACGATGATGATGGGGGCGGGAGTAAGGCGTACAAATCAGCTGCTACAGGCAACAGAGGCTCGAGAAATAGGAGAAGTGAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGTCTCTGCCTTTCTCCTCTGCTTCTATGGCTTATCCTGCTGCTGCTTTAAAGATTCACGCTGTGGCTCTTCCAAATGGCTTCTGGGAAACGCGAAACCGTTGCTG
TGTTTTTCCGAACCTATACTCTTCCTTTCGCACTCTGAAGCTACCAACTGGATTTACAAGAAAATCCGCCATTGTCGCCGCAAAGAAGACCCATGCTAACACTAACAAGG
AAGATACTCACCGCTCCGTACCCAGACCTGATGAGTCTACGCGGTTTTTCCCTGAAGCTGTCCTGCTTAAGGAGAAAAGGGTTGCAGAAGATGGTAAATTCCTCCCTGAG
TTTGCTGATGCGGAAGAAGAAGAGCTTTATGAATATTTGAACCTTCAGTTGGAAAGTGAATCGAAAGTTGAAGAAATGCGTCACTATGAGGTGGTCTATTTAATTCATGA
GAAGAATGCAGAAGAGGTCGAGACTGTAAATGTGAAAGTTCAAGAGTTTTTAAGGGAGAAGAAAGGGAAGGTATGGAGACTGAGTGATTGGGGAATGCGAAGACTTGCAT
ACAAGATAAAGAAAGCTAAATATGCACATTACATATTGATGAATTTTGAACTGGAAGCCAAATGGATTAATGAATTTAAGAGCATGTTAGATATGGATGAAAGAATAATT
CGACATCTTGTGATTAAGAGAGATGCTGCTATCACAGAAGATTGCCCTCCACCTCCCGAGTTTCACACCCTTCGTGCAGGCGTAGATGATGACAGTGAAGAAGATGAGAT
GGATGATTATGAGAGCGAGGATGAAATGGATTGGGATGATGAGGATGAGGATGAGGATGAGTTGGATGATTATGGTGATGACATTGAGGATGGGGTTATTGTCGTCAACA
CTGTTGACGATGAGGATGACGATGATGATGGGGGCGGGAGTAAGGCGTACAAATCAGCTGCTACAGGCAACAGAGGCTCGAGAAATAGGAGAAGTGAG
Protein sequenceShow/hide protein sequence
MESLPFSSASMAYPAAALKIHAVALPNGFWETRNRCCVFPNLYSSFRTLKLPTGFTRKSAIVAAKKTHANTNKEDTHRSVPRPDESTRFFPEAVLLKEKRVAEDGKFLPE
FADAEEEELYEYLNLQLESESKVEEMRHYEVVYLIHEKNAEEVETVNVKVQEFLREKKGKVWRLSDWGMRRLAYKIKKAKYAHYILMNFELEAKWINEFKSMLDMDERII
RHLVIKRDAAITEDCPPPPEFHTLRAGVDDDSEEDEMDDYESEDEMDWDDEDEDEDELDDYGDDIEDGVIVVNTVDDEDDDDDGGGSKAYKSAATGNRGSRNRRSE