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MS019365 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019365
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAuxin response factor
Genome locationscaffold611:654390..654488
RNA-Seq ExpressionMS019365
SyntenyMS019365
Gene Ontology termsNA
InterPro domainsIPR015300 - DNA-binding pseudobarrel domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PHT35177.1 Auxin response factor 4 [Capsicum baccatum]2.5e-0681.82Show/hide
Query:  FAGQPWRHLLTTGWSIFVGQKNLIYGGAVLFLR
        + GQP RHLLTTGWSIFVGQKNL+ G AVLFLR
Subjt:  FAGQPWRHLLTTGWSIFVGQKNLIYGGAVLFLR

PHU03845.1 Auxin response factor 4 [Capsicum chinense]2.5e-0681.82Show/hide
Query:  FAGQPWRHLLTTGWSIFVGQKNLIYGGAVLFLR
        + GQP RHLLTTGWSIFVGQKNL+ G AVLFLR
Subjt:  FAGQPWRHLLTTGWSIFVGQKNLIYGGAVLFLR

XP_016547815.1 PREDICTED: auxin response factor 4 [Capsicum annuum]2.5e-0681.82Show/hide
Query:  FAGQPWRHLLTTGWSIFVGQKNLIYGGAVLFLR
        + GQP RHLLTTGWSIFVGQKNL+ G AVLFLR
Subjt:  FAGQPWRHLLTTGWSIFVGQKNLIYGGAVLFLR

XP_028080896.1 auxin response factor 4-like [Camellia sinensis]4.2e-0683.87Show/hide
Query:  GQPWRHLLTTGWSIFVGQKNLIYGGAVLFLR
        GQ WRHLLTTGWSIFV QKNL+ G AVLFLR
Subjt:  GQPWRHLLTTGWSIFVGQKNLIYGGAVLFLR

XP_028080988.1 auxin response factor 4-like isoform X2 [Camellia sinensis]1.9e-0678.79Show/hide
Query:  FAGQPWRHLLTTGWSIFVGQKNLIYGGAVLFLR
        F+ QPWRHLLTTGWSIFV QKNL+ G AVL LR
Subjt:  FAGQPWRHLLTTGWSIFVGQKNLIYGGAVLFLR

TrEMBL top hitse value%identityAlignment
A0A1U8EWQ6 Auxin response factor1.2e-0681.82Show/hide
Query:  FAGQPWRHLLTTGWSIFVGQKNLIYGGAVLFLR
        + GQP RHLLTTGWSIFVGQKNL+ G AVLFLR
Subjt:  FAGQPWRHLLTTGWSIFVGQKNLIYGGAVLFLR

A0A2G2VQB8 Auxin response factor1.2e-0681.82Show/hide
Query:  FAGQPWRHLLTTGWSIFVGQKNLIYGGAVLFLR
        + GQP RHLLTTGWSIFVGQKNL+ G AVLFLR
Subjt:  FAGQPWRHLLTTGWSIFVGQKNLIYGGAVLFLR

A0A2G2YHS7 Auxin response factor1.2e-0681.82Show/hide
Query:  FAGQPWRHLLTTGWSIFVGQKNLIYGGAVLFLR
        + GQP RHLLTTGWSIFVGQKNL+ G AVLFLR
Subjt:  FAGQPWRHLLTTGWSIFVGQKNLIYGGAVLFLR

A0A2G3BBK1 Auxin response factor1.2e-0681.82Show/hide
Query:  FAGQPWRHLLTTGWSIFVGQKNLIYGGAVLFLR
        + GQP RHLLTTGWSIFVGQKNL+ G AVLFLR
Subjt:  FAGQPWRHLLTTGWSIFVGQKNLIYGGAVLFLR

A0A4Y7KXS9 Auxin response factor2.7e-0681.82Show/hide
Query:  FAGQPWRHLLTTGWSIFVGQKNLIYGGAVLFLR
        F GQP RHLLTTGWSIFV QKNL+ G AVLFLR
Subjt:  FAGQPWRHLLTTGWSIFVGQKNLIYGGAVLFLR

SwissProt top hitse value%identityAlignment
O23661 Auxin response factor 38.8e-0769.7Show/hide
Query:  FAGQPWRHLLTTGWSIFVGQKNLIYGGAVLFLR
        + GQP RHLLTTGWS FV +K L+ G AVLFLR
Subjt:  FAGQPWRHLLTTGWSIFVGQKNLIYGGAVLFLR

Q5JMM1 Auxin response factor 31.2e-0669.7Show/hide
Query:  FAGQPWRHLLTTGWSIFVGQKNLIYGGAVLFLR
        + GQP RHLLTTGWS FV +K L+ G AVLFLR
Subjt:  FAGQPWRHLLTTGWSIFVGQKNLIYGGAVLFLR

Q8L7G0 Auxin response factor 11.2e-0666.67Show/hide
Query:  FAGQPWRHLLTTGWSIFVGQKNLIYGGAVLFLR
        F GQP RHLLTTGWS+FV  K L+ G A +FLR
Subjt:  FAGQPWRHLLTTGWSIFVGQKNLIYGGAVLFLR

Q8S985 Auxin response factor 158.8e-0769.7Show/hide
Query:  FAGQPWRHLLTTGWSIFVGQKNLIYGGAVLFLR
        + GQP RHLLTTGWS FV +K L+ G AVLFLR
Subjt:  FAGQPWRHLLTTGWSIFVGQKNLIYGGAVLFLR

Q9ZTX9 Auxin response factor 41.6e-0878.79Show/hide
Query:  FAGQPWRHLLTTGWSIFVGQKNLIYGGAVLFLR
        + GQP RHLLTTGWSIFV QKNL+ G AVLFLR
Subjt:  FAGQPWRHLLTTGWSIFVGQKNLIYGGAVLFLR

Arabidopsis top hitse value%identityAlignment
AT1G59750.1 auxin response factor 18.2e-0866.67Show/hide
Query:  FAGQPWRHLLTTGWSIFVGQKNLIYGGAVLFLR
        F GQP RHLLTTGWS+FV  K L+ G A +FLR
Subjt:  FAGQPWRHLLTTGWSIFVGQKNLIYGGAVLFLR

AT1G59750.2 auxin response factor 18.2e-0866.67Show/hide
Query:  FAGQPWRHLLTTGWSIFVGQKNLIYGGAVLFLR
        F GQP RHLLTTGWS+FV  K L+ G A +FLR
Subjt:  FAGQPWRHLLTTGWSIFVGQKNLIYGGAVLFLR

AT1G59750.3 auxin response factor 18.2e-0866.67Show/hide
Query:  FAGQPWRHLLTTGWSIFVGQKNLIYGGAVLFLR
        F GQP RHLLTTGWS+FV  K L+ G A +FLR
Subjt:  FAGQPWRHLLTTGWSIFVGQKNLIYGGAVLFLR

AT2G33860.1 Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related6.3e-0869.7Show/hide
Query:  FAGQPWRHLLTTGWSIFVGQKNLIYGGAVLFLR
        + GQP RHLLTTGWS FV +K L+ G AVLFLR
Subjt:  FAGQPWRHLLTTGWSIFVGQKNLIYGGAVLFLR

AT5G60450.1 auxin response factor 41.1e-0978.79Show/hide
Query:  FAGQPWRHLLTTGWSIFVGQKNLIYGGAVLFLR
        + GQP RHLLTTGWSIFV QKNL+ G AVLFLR
Subjt:  FAGQPWRHLLTTGWSIFVGQKNLIYGGAVLFLR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTTGCAGGTCAACCTTGGCGGCATCTGCTCACTACTGGGTGGAGTATTTTTGTTGGCCAAAAGAATCTTATTTATGGGGGTGCAGTGCTCTTTCTAAGG
mRNA sequenceShow/hide mRNA sequence
TTTGCAGGTCAACCTTGGCGGCATCTGCTCACTACTGGGTGGAGTATTTTTGTTGGCCAAAAGAATCTTATTTATGGGGGTGCAGTGCTCTTTCTAAGG
Protein sequenceShow/hide protein sequence
FAGQPWRHLLTTGWSIFVGQKNLIYGGAVLFLR