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MS019416 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019416
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionFra a 1-associated protein
Genome locationscaffold28:259107..262610
RNA-Seq ExpressionMS019416
SyntenyMS019416
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136529.1 fra a 1-associated protein [Cucumis sativus]1.8e-6973.1Show/hide
Query:  MGWVWRDEPGESDSLAGD-------SGGSSGDRCSTRKVVKSQCRTEEVEPGKFVRKCERTEEILRDCVGRPVEVIQSNKEFTEEDVTDQVVNRSFS--S
        MGWVWRD+  +SDS A D       +  SS D CSTR VV+S C+TEEVEPGKFVRKCERTEEILRDC+GRP EVI+SNKE TEEDVTDQ+VNRSFS  S
Subjt:  MGWVWRDEPGESDSLAGD-------SGGSSGDRCSTRKVVKSQCRTEEVEPGKFVRKCERTEEILRDCVGRPVEVIQSNKEFTEEDVTDQVVNRSFS--S

Query:  GPSVHQPFGFPGLRSDIEAIERNLFGSMKGFFEAAEEIKNGFFGVLRDPHQF-IEESSSPSMRRGIPI-EDHEQRFFSKPNEHDSGHVDLSGLARDV
         PS H+P  FPGLRSDI+AIE++LFGSMKGFFEAAEEIKNGFFG LRDP  F  + SSS SMRRGIPI EDH+  FF  P E DSGHVDLSGLARDV
Subjt:  GPSVHQPFGFPGLRSDIEAIERNLFGSMKGFFEAAEEIKNGFFGVLRDPHQF-IEESSSPSMRRGIPI-EDHEQRFFSKPNEHDSGHVDLSGLARDV

XP_008442953.1 PREDICTED: uncharacterized protein LOC103486704 [Cucumis melo]4.1e-7475.77Show/hide
Query:  MGWVWRDEPGESDSLAGDSG-------GSSGDRCSTRKVVKSQCRTEEVEPGKFVRKCERTEEILRDCVGRPVEVIQSNKEFTEEDVTDQVVNRSFSSGP
        MGWVW D+ G+ DS A D          SS DRCSTR VV+S C+TEEVEPGKFVRKCERTEEILRDC+GRP EVIQSNKEFTEEDVTDQ+VNRSF  G 
Subjt:  MGWVWRDEPGESDSLAGDSG-------GSSGDRCSTRKVVKSQCRTEEVEPGKFVRKCERTEEILRDCVGRPVEVIQSNKEFTEEDVTDQVVNRSFSSGP

Query:  SVHQPFGFPGLRSDIEAIERNLFGSMKGFFEAAEEIKNGFFGVLRDPHQFIEESSSP-SMRRGIPIEDHEQRFFSKPNEHDSGHVDLSGLARDV
        S H+PF FPGLRSDI+AIE++LFGSMKGFFEAAEEIKNGFFG LRDP  F  +SSSP SMRRGIPIEDH+  FFS P E DSGHVDLSGLARDV
Subjt:  SVHQPFGFPGLRSDIEAIERNLFGSMKGFFEAAEEIKNGFFGVLRDPHQFIEESSSP-SMRRGIPIEDHEQRFFSKPNEHDSGHVDLSGLARDV

XP_022151462.1 uncharacterized protein LOC111019393 [Momordica charantia]5.3e-9897.31Show/hide
Query:  MGWVWRDEPGESDSLAGDSGGSSGDRCSTRKVVKSQCRTEEVEPGKFVRKCERTEEILRDCVGRPVEVIQSNKEFTEEDVTDQVVNRSFSSGPSVHQPFG
        MGWVWRDEPGESD LAGDSGGSSGDRCSTRKVVKSQCRTEEVEPGKFVRKCERTEEILRDCVGRPVEVIQSNKEFTEEDV DQVVNRSFSSG SVHQPFG
Subjt:  MGWVWRDEPGESDSLAGDSGGSSGDRCSTRKVVKSQCRTEEVEPGKFVRKCERTEEILRDCVGRPVEVIQSNKEFTEEDVTDQVVNRSFSSGPSVHQPFG

Query:  FPGLRSDIEAIERNLFGSMKGFFEAAEEIKNGFFGVLRDPHQFIEESSSPSMRRGIPIEDHEQRFFSKPNEHDSGHVDLSGLARDV
        FPGLRSDIEAIERNLFGSMKGFFEAAEEIKNGFFGVLRDPHQFIEESSSPSMRRGIPIEDHEQR FSKPNE DSGHVDLSGLARDV
Subjt:  FPGLRSDIEAIERNLFGSMKGFFEAAEEIKNGFFGVLRDPHQFIEESSSPSMRRGIPIEDHEQRFFSKPNEHDSGHVDLSGLARDV

XP_022940131.1 uncharacterized protein LOC111445845 [Cucurbita moschata]7.8e-6572.82Show/hide
Query:  MGWVWRDEPGESDSLAGD-------SGGSSGDRCSTRKVVKSQCRTEEVEPGKFVRKCERTEEILRDCVGRPVEVIQSNKEFTEEDVTDQVV-NRSFSSG
        MG VWR   GE DS AGD       S  SSGDRCSTRKVVKSQC+TEEVEPGKFVRKCERTEEILRDC+GRPVEVIQSN+EFTEEDVT++VV NRSFSSG
Subjt:  MGWVWRDEPGESDSLAGD-------SGGSSGDRCSTRKVVKSQCRTEEVEPGKFVRKCERTEEILRDCVGRPVEVIQSNKEFTEEDVTDQVV-NRSFSSG

Query:  PSVHQPFGFPGLRSDIEAIERNLFGSMKGFFEAAEEIKNGFFGVLRDPHQFIEE-SSSPSMRRGIPIEDHEQRFFSKPNEHDSGHVDLSGLARDV
         S +QPF FPGLRSDIEAIE +LFGSMKGFF+AAEEI+NGFFG  RDP  F  E SSSPSMR+               NE DSGHVDLSGLARDV
Subjt:  PSVHQPFGFPGLRSDIEAIERNLFGSMKGFFEAAEEIKNGFFGVLRDPHQFIEE-SSSPSMRRGIPIEDHEQRFFSKPNEHDSGHVDLSGLARDV

XP_038905970.1 fra a 1-associated protein [Benincasa hispida]4.0e-7779.38Show/hide
Query:  MGWVWRDEPGESDSLAGD-------SGGSSGDRCSTRKVVKSQCRTEEVEPGKFVRKCERTEEILRDCVGRPVEVIQSNKEFTEEDVTDQVVNRSFSSGP
        MGWVWRD+ GE DS A D       +  S  DRCSTRKVVKSQC+TEEVEPGKFVRKCERTEEILRDC+GRPVEVIQSNKEFTEEDVTDQ+VNRSFS G 
Subjt:  MGWVWRDEPGESDSLAGD-------SGGSSGDRCSTRKVVKSQCRTEEVEPGKFVRKCERTEEILRDCVGRPVEVIQSNKEFTEEDVTDQVVNRSFSSGP

Query:  SVHQPFGFPGLRSDIEAIERNLFGSMKGFFEAAEEIKNGFFGVLRDPHQF-IEESSSPSMRRGIPIEDHEQRFFSKPNEHDSGHVDLSGLARDV
        S H+PF FPGLRSDI+AIE++LFGSMKGFFEAAEEIKNGFFG LRDP  F  E SSSPSMRRGIPIEDHE  FFS   E DSGHVDLSGLARDV
Subjt:  SVHQPFGFPGLRSDIEAIERNLFGSMKGFFEAAEEIKNGFFGVLRDPHQF-IEESSSPSMRRGIPIEDHEQRFFSKPNEHDSGHVDLSGLARDV

TrEMBL top hitse value%identityAlignment
A0A0A0LGU7 Uncharacterized protein8.7e-7073.1Show/hide
Query:  MGWVWRDEPGESDSLAGD-------SGGSSGDRCSTRKVVKSQCRTEEVEPGKFVRKCERTEEILRDCVGRPVEVIQSNKEFTEEDVTDQVVNRSFS--S
        MGWVWRD+  +SDS A D       +  SS D CSTR VV+S C+TEEVEPGKFVRKCERTEEILRDC+GRP EVI+SNKE TEEDVTDQ+VNRSFS  S
Subjt:  MGWVWRDEPGESDSLAGD-------SGGSSGDRCSTRKVVKSQCRTEEVEPGKFVRKCERTEEILRDCVGRPVEVIQSNKEFTEEDVTDQVVNRSFS--S

Query:  GPSVHQPFGFPGLRSDIEAIERNLFGSMKGFFEAAEEIKNGFFGVLRDPHQF-IEESSSPSMRRGIPI-EDHEQRFFSKPNEHDSGHVDLSGLARDV
         PS H+P  FPGLRSDI+AIE++LFGSMKGFFEAAEEIKNGFFG LRDP  F  + SSS SMRRGIPI EDH+  FF  P E DSGHVDLSGLARDV
Subjt:  GPSVHQPFGFPGLRSDIEAIERNLFGSMKGFFEAAEEIKNGFFGVLRDPHQF-IEESSSPSMRRGIPI-EDHEQRFFSKPNEHDSGHVDLSGLARDV

A0A1S3B6X7 uncharacterized protein LOC1034867042.0e-7475.77Show/hide
Query:  MGWVWRDEPGESDSLAGDSG-------GSSGDRCSTRKVVKSQCRTEEVEPGKFVRKCERTEEILRDCVGRPVEVIQSNKEFTEEDVTDQVVNRSFSSGP
        MGWVW D+ G+ DS A D          SS DRCSTR VV+S C+TEEVEPGKFVRKCERTEEILRDC+GRP EVIQSNKEFTEEDVTDQ+VNRSF  G 
Subjt:  MGWVWRDEPGESDSLAGDSG-------GSSGDRCSTRKVVKSQCRTEEVEPGKFVRKCERTEEILRDCVGRPVEVIQSNKEFTEEDVTDQVVNRSFSSGP

Query:  SVHQPFGFPGLRSDIEAIERNLFGSMKGFFEAAEEIKNGFFGVLRDPHQFIEESSSP-SMRRGIPIEDHEQRFFSKPNEHDSGHVDLSGLARDV
        S H+PF FPGLRSDI+AIE++LFGSMKGFFEAAEEIKNGFFG LRDP  F  +SSSP SMRRGIPIEDH+  FFS P E DSGHVDLSGLARDV
Subjt:  SVHQPFGFPGLRSDIEAIERNLFGSMKGFFEAAEEIKNGFFGVLRDPHQFIEESSSP-SMRRGIPIEDHEQRFFSKPNEHDSGHVDLSGLARDV

A0A6J1DDK9 uncharacterized protein LOC1110193932.6e-9897.31Show/hide
Query:  MGWVWRDEPGESDSLAGDSGGSSGDRCSTRKVVKSQCRTEEVEPGKFVRKCERTEEILRDCVGRPVEVIQSNKEFTEEDVTDQVVNRSFSSGPSVHQPFG
        MGWVWRDEPGESD LAGDSGGSSGDRCSTRKVVKSQCRTEEVEPGKFVRKCERTEEILRDCVGRPVEVIQSNKEFTEEDV DQVVNRSFSSG SVHQPFG
Subjt:  MGWVWRDEPGESDSLAGDSGGSSGDRCSTRKVVKSQCRTEEVEPGKFVRKCERTEEILRDCVGRPVEVIQSNKEFTEEDVTDQVVNRSFSSGPSVHQPFG

Query:  FPGLRSDIEAIERNLFGSMKGFFEAAEEIKNGFFGVLRDPHQFIEESSSPSMRRGIPIEDHEQRFFSKPNEHDSGHVDLSGLARDV
        FPGLRSDIEAIERNLFGSMKGFFEAAEEIKNGFFGVLRDPHQFIEESSSPSMRRGIPIEDHEQR FSKPNE DSGHVDLSGLARDV
Subjt:  FPGLRSDIEAIERNLFGSMKGFFEAAEEIKNGFFGVLRDPHQFIEESSSPSMRRGIPIEDHEQRFFSKPNEHDSGHVDLSGLARDV

A0A6J1FHK7 uncharacterized protein LOC1114458453.8e-6572.82Show/hide
Query:  MGWVWRDEPGESDSLAGD-------SGGSSGDRCSTRKVVKSQCRTEEVEPGKFVRKCERTEEILRDCVGRPVEVIQSNKEFTEEDVTDQVV-NRSFSSG
        MG VWR   GE DS AGD       S  SSGDRCSTRKVVKSQC+TEEVEPGKFVRKCERTEEILRDC+GRPVEVIQSN+EFTEEDVT++VV NRSFSSG
Subjt:  MGWVWRDEPGESDSLAGD-------SGGSSGDRCSTRKVVKSQCRTEEVEPGKFVRKCERTEEILRDCVGRPVEVIQSNKEFTEEDVTDQVV-NRSFSSG

Query:  PSVHQPFGFPGLRSDIEAIERNLFGSMKGFFEAAEEIKNGFFGVLRDPHQFIEE-SSSPSMRRGIPIEDHEQRFFSKPNEHDSGHVDLSGLARDV
         S +QPF FPGLRSDIEAIE +LFGSMKGFF+AAEEI+NGFFG  RDP  F  E SSSPSMR+               NE DSGHVDLSGLARDV
Subjt:  PSVHQPFGFPGLRSDIEAIERNLFGSMKGFFEAAEEIKNGFFGVLRDPHQFIEE-SSSPSMRRGIPIEDHEQRFFSKPNEHDSGHVDLSGLARDV

A0A6J1KVN4 uncharacterized protein LOC1114986066.4e-6572.82Show/hide
Query:  MGWVWRDEPGESDSLAGD-------SGGSSGDRCSTRKVVKSQCRTEEVEPGKFVRKCERTEEILRDCVGRPVEVIQSNKEFTEEDVTDQVV-NRSFSSG
        MG VWR   GE DS AGD       S  SSGDRCSTRKVVKSQC+TEEVEPGKFVRKCERTEEILRDC+GRPVEVIQSN+EFTEEDVT++VV NRSFSSG
Subjt:  MGWVWRDEPGESDSLAGD-------SGGSSGDRCSTRKVVKSQCRTEEVEPGKFVRKCERTEEILRDCVGRPVEVIQSNKEFTEEDVTDQVV-NRSFSSG

Query:  PSVHQPFGFPGLRSDIEAIERNLFGSMKGFFEAAEEIKNGFFGVLRDPHQFIEE-SSSPSMRRGIPIEDHEQRFFSKPNEHDSGHVDLSGLARDV
         S +QPF FPGLRSDIEAIE +LFGSMKGFF+AAEEI+NGFFG  RDP  F  E SSSPSMR+               NE DSGHVDLSGLARDV
Subjt:  PSVHQPFGFPGLRSDIEAIERNLFGSMKGFFEAAEEIKNGFFGVLRDPHQFIEE-SSSPSMRRGIPIEDHEQRFFSKPNEHDSGHVDLSGLARDV

SwissProt top hitse value%identityAlignment
W5X2N3 Fra a 1-associated protein8.4e-5458.03Show/hide
Query:  MGWVWRDEPGE----SDSLAGDSGGSSGDRCSTRKVVKSQCRTEEVEPGKFVRKCERTEEILRDCVGRPVEVIQSNKEFTEEDVTDQVVNRSFSSGPSVH
        MGWVW+D+  +    + S A  S    GDRCSTRKVV++QC+TEEVEPGKF+RKCE+TEE+LRDCVGRP+EV+QSNKE+TE+DVTDQV+  S S G + +
Subjt:  MGWVWRDEPGE----SDSLAGDSGGSSGDRCSTRKVVKSQCRTEEVEPGKFVRKCERTEEILRDCVGRPVEVIQSNKEFTEEDVTDQVVNRSFSSGPSVH

Query:  QPFGFPGLRSDIEAIERNLFGSMKGFFEAAEEIKNGFFGVLRDPHQFIE--ESSSPSMRRGIPIEDHEQ-RFFSKPNEHDSGHVDLSGLARDV
          F FPGL+ DI+ IE N  G +  FFEAAE++KNGFF     PH F E   +S PS RR IPI+   Q   F K     SG VDLSGLARDV
Subjt:  QPFGFPGLRSDIEAIERNLFGSMKGFFEAAEEIKNGFFGVLRDPHQFIE--ESSSPSMRRGIPIEDHEQ-RFFSKPNEHDSGHVDLSGLARDV

Arabidopsis top hitse value%identityAlignment
AT2G35900.1 unknown protein4.3e-4550.25Show/hide
Query:  MGWVWRDEPGES-------DSLAGDSGGSSGDRCSTRKVVKSQCRTEEVEPGKFVRKCERTEEILRDCVGRPVEVIQSNKEFTEEDVTDQVVNRS-FSSG
        MGW+W D+   S       D   GDS  ++ + CST  VV+SQC+TEEVEPGKFVRKC++TEEILR C G+P EV+QSN E TEEDVTDQ+V RS   + 
Subjt:  MGWVWRDEPGES-------DSLAGDSGGSSGDRCSTRKVVKSQCRTEEVEPGKFVRKCERTEEILRDCVGRPVEVIQSNKEFTEEDVTDQVVNRS-FSSG

Query:  PSVHQPFGFPGLRSDIEAIERNLFGSMKGFFEAAEEIKNGFFGVLRDPHQFIEESSSPSMRR-GIPIEDHEQRFFSKPNE------HDSGHVDLSGLARD
             P  FPGLR D++AIER+    MK FF+AAEE+ +  F ++ D H        PS RR GIPIE+H +    + +E      H SG +DLSGLA+D
Subjt:  PSVHQPFGFPGLRSDIEAIERNLFGSMKGFFEAAEEIKNGFFGVLRDPHQFIEESSSPSMRR-GIPIEDHEQRFFSKPNE------HDSGHVDLSGLARD

Query:  V
        V
Subjt:  V


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATGGGTTTGGAGAGACGAGCCCGGCGAATCGGATTCACTTGCCGGCGACAGCGGTGGGTCGTCCGGCGATCGATGTTCTACCAGAAAGGTGGTGAAGTCGCAGTG
CAGGACCGAGGAGGTTGAGCCCGGAAAGTTCGTCAGGAAGTGCGAGAGAACCGAGGAGATTCTCAGGGACTGCGTCGGACGGCCGGTTGAAGTGATACAATCCAACAAGG
AATTTACAGAAGAGGATGTTACAGATCAGGTGGTCAATAGGTCATTCTCGTCAGGACCATCCGTACATCAACCATTTGGTTTCCCTGGGCTCCGTAGTGACATTGAAGCC
ATCGAGCGCAATCTCTTCGGTAGCATGAAGGGGTTCTTTGAAGCAGCTGAAGAGATCAAGAATGGTTTCTTTGGTGTTCTTAGAGATCCACACCAATTCATTGAAGAGTC
ATCCTCCCCATCAATGAGACGAGGAATACCCATCGAGGATCACGAGCAAAGGTTCTTCTCTAAACCCAACGAGCACGATTCTGGGCACGTTGACCTATCAGGATTGGCCA
GGGATGTC
mRNA sequenceShow/hide mRNA sequence
ATGGGATGGGTTTGGAGAGACGAGCCCGGCGAATCGGATTCACTTGCCGGCGACAGCGGTGGGTCGTCCGGCGATCGATGTTCTACCAGAAAGGTGGTGAAGTCGCAGTG
CAGGACCGAGGAGGTTGAGCCCGGAAAGTTCGTCAGGAAGTGCGAGAGAACCGAGGAGATTCTCAGGGACTGCGTCGGACGGCCGGTTGAAGTGATACAATCCAACAAGG
AATTTACAGAAGAGGATGTTACAGATCAGGTGGTCAATAGGTCATTCTCGTCAGGACCATCCGTACATCAACCATTTGGTTTCCCTGGGCTCCGTAGTGACATTGAAGCC
ATCGAGCGCAATCTCTTCGGTAGCATGAAGGGGTTCTTTGAAGCAGCTGAAGAGATCAAGAATGGTTTCTTTGGTGTTCTTAGAGATCCACACCAATTCATTGAAGAGTC
ATCCTCCCCATCAATGAGACGAGGAATACCCATCGAGGATCACGAGCAAAGGTTCTTCTCTAAACCCAACGAGCACGATTCTGGGCACGTTGACCTATCAGGATTGGCCA
GGGATGTC
Protein sequenceShow/hide protein sequence
MGWVWRDEPGESDSLAGDSGGSSGDRCSTRKVVKSQCRTEEVEPGKFVRKCERTEEILRDCVGRPVEVIQSNKEFTEEDVTDQVVNRSFSSGPSVHQPFGFPGLRSDIEA
IERNLFGSMKGFFEAAEEIKNGFFGVLRDPHQFIEESSSPSMRRGIPIEDHEQRFFSKPNEHDSGHVDLSGLARDV