; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS019428 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019428
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNuclear transcription factor Y subunit
Genome locationscaffold28:373042..376415
RNA-Seq ExpressionMS019428
SyntenyMS019428
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001289 - Nuclear transcription factor Y subunit A


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008442935.1 PREDICTED: nuclear transcription factor Y subunit A-10 [Cucumis melo]5.4e-16287.2Show/hide
Query:  MAPQTGYLKEHEGIVPNSLGQLSSSPARLWSAFGQGSQTIFGDFGQLKASSIEQLGSNGKEFTGAKQAAQVSEHGLEKVNTAPFSIYPGDCKNSVDAQKP
        MAPQTG LKEHE I+PNSLGQLS SPARLWSAFGQG Q+IFGDFGQ+KASSI+QLGSNGKEF G K   QV  HGL+K+NTAPFSIYPGD K S+DAQKP
Subjt:  MAPQTGYLKEHEGIVPNSLGQLSSSPARLWSAFGQGSQTIFGDFGQLKASSIEQLGSNGKEFTGAKQAAQVSEHGLEKVNTAPFSIYPGDCKNSVDAQKP

Query:  SPVFSLQSPLSEYHTRFELGFGQPVICANYPCMEQHYGILSAYGPQIPGRVMLPMSLTTDDGPIYVNAKQYHGIIRRRQIRAKAMMENRLARTRKPYMHE
        SPVFSLQSPL+EYH RFELGFGQP+IC NYP MEQHYGILSAYGPQIPGR+MLPMSLT+DDGPIYVNAKQYHGIIRRRQIRAKAMMEN+LARTRKPYMHE
Subjt:  SPVFSLQSPLSEYHTRFELGFGQPVICANYPCMEQHYGILSAYGPQIPGRVMLPMSLTTDDGPIYVNAKQYHGIIRRRQIRAKAMMENRLARTRKPYMHE

Query:  SRHLHAMRRPRGSGGRFLNTKNLKDGKISLESKKVDNVNLSESTGSQCSVVLQSESGTLNSPNEAKGRGFNLSSSEVPSMFSRGLQRFQISHLRPSMQSL
        SRHLHAMRRPRGSGGRFLNTKNLK+GK S+E KK+D VNLS+STGSQCSVVLQSESGTLNSPNEAKGRGF+LSSSEV S+FSRGLQRFQI+HL PS+ SL
Subjt:  SRHLHAMRRPRGSGGRFLNTKNLKDGKISLESKKVDNVNLSESTGSQCSVVLQSESGTLNSPNEAKGRGFNLSSSEVPSMFSRGLQRFQISHLRPSMQSL

Query:  AEIIDGGGHGMVLPKWVAAADNCCDLCV
        AEIIDGGGHGMVLPKWVAAADNCCDLCV
Subjt:  AEIIDGGGHGMVLPKWVAAADNCCDLCV

XP_022151376.1 nuclear transcription factor Y subunit A-10 [Momordica charantia]3.5e-18599.7Show/hide
Query:  MAPQTGYLKEHEGIVPNSLGQLSSSPARLWSAFGQGSQTIFGDFGQLKASSIEQLGSNGKEFTGAKQAAQVSEHGLEKVNTAPFSIYPGDCKNSVDAQKP
        MAPQTGYLKEHEGIVPNSLGQLSSSPARLWSAFGQGSQTIFGDFGQLKASSIEQLGSNGKEFTGAKQAAQVSEHGLEKVNTAPFSIYPGDCKNSVDAQKP
Subjt:  MAPQTGYLKEHEGIVPNSLGQLSSSPARLWSAFGQGSQTIFGDFGQLKASSIEQLGSNGKEFTGAKQAAQVSEHGLEKVNTAPFSIYPGDCKNSVDAQKP

Query:  SPVFSLQSPLSEYHTRFELGFGQPVICANYPCMEQHYGILSAYGPQIPGRVMLPMSLTTDDGPIYVNAKQYHGIIRRRQIRAKAMMENRLARTRKPYMHE
        SPVFSLQSPLSEYHTRFELGFGQPVICANYP MEQHYGILSAYGPQIPGRVMLPMSLTTDDGPIYVNAKQYHGIIRRRQIRAKAMMENRLARTRKPYMHE
Subjt:  SPVFSLQSPLSEYHTRFELGFGQPVICANYPCMEQHYGILSAYGPQIPGRVMLPMSLTTDDGPIYVNAKQYHGIIRRRQIRAKAMMENRLARTRKPYMHE

Query:  SRHLHAMRRPRGSGGRFLNTKNLKDGKISLESKKVDNVNLSESTGSQCSVVLQSESGTLNSPNEAKGRGFNLSSSEVPSMFSRGLQRFQISHLRPSMQSL
        SRHLHAMRRPRGSGGRFLNTKNLKDGKISLESKKVDNVNLSESTGSQCSVVLQSESGTLNSPNEAKGRGFNLSSSEVPSMFSRGLQRFQISHLRPSMQSL
Subjt:  SRHLHAMRRPRGSGGRFLNTKNLKDGKISLESKKVDNVNLSESTGSQCSVVLQSESGTLNSPNEAKGRGFNLSSSEVPSMFSRGLQRFQISHLRPSMQSL

Query:  AEIIDGGGHGMVLPKWVAAADNCCDLCV
        AEIIDGGGHGMVLPKWVAAADNCCDLCV
Subjt:  AEIIDGGGHGMVLPKWVAAADNCCDLCV

XP_022934917.1 nuclear transcription factor Y subunit A-10-like [Cucurbita moschata]3.2e-16286.06Show/hide
Query:  MAPQTGYLKEHEGIVPNSLGQLSSSPARLWSAFGQGSQTIFGDFGQLKASS-IEQLGSNGKEFTGAKQAAQVSEHGLEKVNTAPFSIYPGDCKNSVDAQK
        MAPQTGYLKEHEG+VPNSLGQLSSSPARLWS +GQG Q+ FGDFGQ+KASS I+QLGSNGKEFTG +QA QV+ HG EK+NTAPFSIYPGDCK SVD QK
Subjt:  MAPQTGYLKEHEGIVPNSLGQLSSSPARLWSAFGQGSQTIFGDFGQLKASS-IEQLGSNGKEFTGAKQAAQVSEHGLEKVNTAPFSIYPGDCKNSVDAQK

Query:  PSPVFSLQSPLSEYHTRFELGFGQPVICANYPCMEQHYGILSAYGPQIPGRVMLPMSLTTDDGPIYVNAKQYHGIIRRRQIRAKAMMENRLARTRKPYMH
        PSP+FSLQSPLSEYH RFELGFGQP++CANYP MEQHYGILSAY PQIPGR+MLPMSLTTDDGPIYVNAKQYHGIIRRR+IRAKAMMENRLA+TRKPYMH
Subjt:  PSPVFSLQSPLSEYHTRFELGFGQPVICANYPCMEQHYGILSAYGPQIPGRVMLPMSLTTDDGPIYVNAKQYHGIIRRRQIRAKAMMENRLARTRKPYMH

Query:  ESRHLHAMRRPRGSGGRFLNTKNLKDGKISLESKKVDNVNLSESTG-SQCSVVLQSESGTLNSPNEAKGRGFNLSSSEVPSMFSRGLQRFQISHLRPSMQ
        ESRHLHAMRRPRGSGGRFLNTKNLK+GK S+E KK++++NLS+STG SQCSVVLQSESG LNSPN  KGRGF+LSSSEV S FSRGLQRFQI+H  PSMQ
Subjt:  ESRHLHAMRRPRGSGGRFLNTKNLKDGKISLESKKVDNVNLSESTG-SQCSVVLQSESGTLNSPNEAKGRGFNLSSSEVPSMFSRGLQRFQISHLRPSMQ

Query:  SLAEIIDGGGHGMVLPKWVAAADNCCDLCV
        SLAEIIDGGGHGMVLPKWVAAADNCCDLCV
Subjt:  SLAEIIDGGGHGMVLPKWVAAADNCCDLCV

XP_023527628.1 nuclear transcription factor Y subunit A-10-like [Cucurbita pepo subsp. pepo]3.0e-16085.45Show/hide
Query:  MAPQTGYLKEHEGIVPNSLGQLSSSPARLWSAFGQGSQTIFGDFGQLKASS-IEQLGSNGKEFTGAKQAAQVSEHGLEKVNTAPFSIYPGDCKNSVDAQK
        MAPQTGYLKEHEG+VPNSLGQLSSSPARLWS +GQG Q+ FGDFGQ+KASS I+QLGSNGKEFTG +QA QV+ HG EK+NTAPFSIYPGDCK SVD QK
Subjt:  MAPQTGYLKEHEGIVPNSLGQLSSSPARLWSAFGQGSQTIFGDFGQLKASS-IEQLGSNGKEFTGAKQAAQVSEHGLEKVNTAPFSIYPGDCKNSVDAQK

Query:  PSPVFSLQSPLSEYHTRFELGFGQPVICANYPCMEQHYGILSAYGPQIPGRVMLPMSLTTDDGPIYVNAKQYHGIIRRRQIRAKAMMENRLARTRKPYMH
        PSP+FSLQSPLSEYH RFELGFGQP++CANYP MEQHYGILSAY PQIPGR+MLPMSLTTDDGPIYVNAKQYHGIIRRR+IRAKAMMENRLA+TRKPYMH
Subjt:  PSPVFSLQSPLSEYHTRFELGFGQPVICANYPCMEQHYGILSAYGPQIPGRVMLPMSLTTDDGPIYVNAKQYHGIIRRRQIRAKAMMENRLARTRKPYMH

Query:  ESRHLHAMRRPRGSGGRFLNTKNLKDGKISLESKKVDNVNLSESTG-SQCSVVLQSESGTLNSPNEAKGRGFNLSSSEVPSMFSRGLQRFQISHLRPSMQ
        ESRHLHAMRRPRGSGGRFLNTK LK+GK S+E KK +++NLS+STG SQCSVVLQSESG LNSPNE KGRGF+LSSSEV SM SRGLQ+FQI+ L PSMQ
Subjt:  ESRHLHAMRRPRGSGGRFLNTKNLKDGKISLESKKVDNVNLSESTG-SQCSVVLQSESGTLNSPNEAKGRGFNLSSSEVPSMFSRGLQRFQISHLRPSMQ

Query:  SLAEIIDGGGHGMVLPKWVAAADNCCDLCV
        SLAEIIDGGGHGMVLPKWVAA DNCCDLCV
Subjt:  SLAEIIDGGGHGMVLPKWVAAADNCCDLCV

XP_038906117.1 nuclear transcription factor Y subunit A-10-like [Benincasa hispida]5.2e-16588.72Show/hide
Query:  MAPQTGYLKEHEGIVPNSLGQLSSSPARLWSAFGQGSQTIFGDFGQLKASSIEQLGSNGKEFTGAKQAAQVSEHGLEKVNTAPFSIYPGDCKNSVDAQKP
        MAPQTGYLKEHEGIVPNSLGQLSSSPARLWSAFGQGSQ+IFGDFG +KASSIEQLGSNGKEF G+KQ A    HG EK+NTAPFSIYPGDCK S+DAQKP
Subjt:  MAPQTGYLKEHEGIVPNSLGQLSSSPARLWSAFGQGSQTIFGDFGQLKASSIEQLGSNGKEFTGAKQAAQVSEHGLEKVNTAPFSIYPGDCKNSVDAQKP

Query:  SPVFSLQSPLSEYHTRFELGFGQPVICANYPCMEQHYGILSAYGPQIPGRVMLPMSLTTDDGPIYVNAKQYHGIIRRRQIRAKAMMENRLARTRKPYMHE
        SP+FSLQSPLSEYH RFELGFGQP+ICANYP MEQHYGILSA+GPQIPGR+MLPMSLT+DDGPIYVNAKQYHGIIRRRQIRAKAMMEN+LARTRKPYMHE
Subjt:  SPVFSLQSPLSEYHTRFELGFGQPVICANYPCMEQHYGILSAYGPQIPGRVMLPMSLTTDDGPIYVNAKQYHGIIRRRQIRAKAMMENRLARTRKPYMHE

Query:  SRHLHAMRRPRGSGGRFLNTKNLKDGKISLESKKVDNVNLSESTGSQCSVVLQSESGTLNSPNEAKGRGFNLSSSEVPSMFSRGLQRFQISHLRPSMQSL
        SRHLHAMRRPRGSGGRFLNTKNLK+GK S+E KK+D+VNLS+STGSQCSVVLQSESGTLNSPNEAKGRGF+LSSSEV S+F RGLQRFQI+HL PSM SL
Subjt:  SRHLHAMRRPRGSGGRFLNTKNLKDGKISLESKKVDNVNLSESTGSQCSVVLQSESGTLNSPNEAKGRGFNLSSSEVPSMFSRGLQRFQISHLRPSMQSL

Query:  AEIIDGGGHGMVLPKWVAAADNCCDLCV
        AEIIDGGGHGMVLPKWVAAADNCC+LCV
Subjt:  AEIIDGGGHGMVLPKWVAAADNCCDLCV

TrEMBL top hitse value%identityAlignment
A0A0A0LE75 Nuclear transcription factor Y subunit3.2e-16086.89Show/hide
Query:  MAPQTGYLKEHEGIVPNSLGQLSSSPARLWSAFGQGSQTIFGDFGQLKASSIEQLGSNGKEFTGAKQAAQVSEHGLEKVNTAPFSIYPGDCKNSVDAQKP
        MAPQTG LKEHE I+PNSLGQLS +PARLWSA GQGSQ+IFGDFGQ+KASSI QLGSNGKEF G K   QV  HGL+K+NTAPFSIYPGD K S+DAQKP
Subjt:  MAPQTGYLKEHEGIVPNSLGQLSSSPARLWSAFGQGSQTIFGDFGQLKASSIEQLGSNGKEFTGAKQAAQVSEHGLEKVNTAPFSIYPGDCKNSVDAQKP

Query:  SPVFSLQSPLSEYHTRFELGFGQPVICANYPCMEQHYGILSAYGPQIPGRVMLPMSLTTDDGPIYVNAKQYHGIIRRRQIRAKAMMENRLARTRKPYMHE
        SPVFSLQSPL+EYH RFELGFGQP+ICANYP M+QHYGILSAYGPQIPGR+MLPMSLT+DDGPIYVNAKQYHGIIRRRQIRAKAMMEN+LARTRKPYMHE
Subjt:  SPVFSLQSPLSEYHTRFELGFGQPVICANYPCMEQHYGILSAYGPQIPGRVMLPMSLTTDDGPIYVNAKQYHGIIRRRQIRAKAMMENRLARTRKPYMHE

Query:  SRHLHAMRRPRGSGGRFLNTKNLKDGKISLESKKVDNVNLSESTGSQCSVVLQSESGTLNSPNEAKGRGFNLSSSEVPSMFSRGLQRFQISHLRPSMQSL
        SRHLHAMRRPRGSGGRFLNTKNLK+GK S+E KK+D VNLS+STGSQCSVVLQSESGTLNSPNEAKGRGF+LSSSEV S+FSRGLQRFQI+HL PS+ SL
Subjt:  SRHLHAMRRPRGSGGRFLNTKNLKDGKISLESKKVDNVNLSESTGSQCSVVLQSESGTLNSPNEAKGRGFNLSSSEVPSMFSRGLQRFQISHLRPSMQSL

Query:  AEIIDGGGHGMVLPKWVAAADNCCDLCV
        AEIIDGGGHGMVLPKWVAAADNCCDLCV
Subjt:  AEIIDGGGHGMVLPKWVAAADNCCDLCV

A0A1S3B7N7 Nuclear transcription factor Y subunit2.6e-16287.2Show/hide
Query:  MAPQTGYLKEHEGIVPNSLGQLSSSPARLWSAFGQGSQTIFGDFGQLKASSIEQLGSNGKEFTGAKQAAQVSEHGLEKVNTAPFSIYPGDCKNSVDAQKP
        MAPQTG LKEHE I+PNSLGQLS SPARLWSAFGQG Q+IFGDFGQ+KASSI+QLGSNGKEF G K   QV  HGL+K+NTAPFSIYPGD K S+DAQKP
Subjt:  MAPQTGYLKEHEGIVPNSLGQLSSSPARLWSAFGQGSQTIFGDFGQLKASSIEQLGSNGKEFTGAKQAAQVSEHGLEKVNTAPFSIYPGDCKNSVDAQKP

Query:  SPVFSLQSPLSEYHTRFELGFGQPVICANYPCMEQHYGILSAYGPQIPGRVMLPMSLTTDDGPIYVNAKQYHGIIRRRQIRAKAMMENRLARTRKPYMHE
        SPVFSLQSPL+EYH RFELGFGQP+IC NYP MEQHYGILSAYGPQIPGR+MLPMSLT+DDGPIYVNAKQYHGIIRRRQIRAKAMMEN+LARTRKPYMHE
Subjt:  SPVFSLQSPLSEYHTRFELGFGQPVICANYPCMEQHYGILSAYGPQIPGRVMLPMSLTTDDGPIYVNAKQYHGIIRRRQIRAKAMMENRLARTRKPYMHE

Query:  SRHLHAMRRPRGSGGRFLNTKNLKDGKISLESKKVDNVNLSESTGSQCSVVLQSESGTLNSPNEAKGRGFNLSSSEVPSMFSRGLQRFQISHLRPSMQSL
        SRHLHAMRRPRGSGGRFLNTKNLK+GK S+E KK+D VNLS+STGSQCSVVLQSESGTLNSPNEAKGRGF+LSSSEV S+FSRGLQRFQI+HL PS+ SL
Subjt:  SRHLHAMRRPRGSGGRFLNTKNLKDGKISLESKKVDNVNLSESTGSQCSVVLQSESGTLNSPNEAKGRGFNLSSSEVPSMFSRGLQRFQISHLRPSMQSL

Query:  AEIIDGGGHGMVLPKWVAAADNCCDLCV
        AEIIDGGGHGMVLPKWVAAADNCCDLCV
Subjt:  AEIIDGGGHGMVLPKWVAAADNCCDLCV

A0A6J1DDB6 Nuclear transcription factor Y subunit1.7e-18599.7Show/hide
Query:  MAPQTGYLKEHEGIVPNSLGQLSSSPARLWSAFGQGSQTIFGDFGQLKASSIEQLGSNGKEFTGAKQAAQVSEHGLEKVNTAPFSIYPGDCKNSVDAQKP
        MAPQTGYLKEHEGIVPNSLGQLSSSPARLWSAFGQGSQTIFGDFGQLKASSIEQLGSNGKEFTGAKQAAQVSEHGLEKVNTAPFSIYPGDCKNSVDAQKP
Subjt:  MAPQTGYLKEHEGIVPNSLGQLSSSPARLWSAFGQGSQTIFGDFGQLKASSIEQLGSNGKEFTGAKQAAQVSEHGLEKVNTAPFSIYPGDCKNSVDAQKP

Query:  SPVFSLQSPLSEYHTRFELGFGQPVICANYPCMEQHYGILSAYGPQIPGRVMLPMSLTTDDGPIYVNAKQYHGIIRRRQIRAKAMMENRLARTRKPYMHE
        SPVFSLQSPLSEYHTRFELGFGQPVICANYP MEQHYGILSAYGPQIPGRVMLPMSLTTDDGPIYVNAKQYHGIIRRRQIRAKAMMENRLARTRKPYMHE
Subjt:  SPVFSLQSPLSEYHTRFELGFGQPVICANYPCMEQHYGILSAYGPQIPGRVMLPMSLTTDDGPIYVNAKQYHGIIRRRQIRAKAMMENRLARTRKPYMHE

Query:  SRHLHAMRRPRGSGGRFLNTKNLKDGKISLESKKVDNVNLSESTGSQCSVVLQSESGTLNSPNEAKGRGFNLSSSEVPSMFSRGLQRFQISHLRPSMQSL
        SRHLHAMRRPRGSGGRFLNTKNLKDGKISLESKKVDNVNLSESTGSQCSVVLQSESGTLNSPNEAKGRGFNLSSSEVPSMFSRGLQRFQISHLRPSMQSL
Subjt:  SRHLHAMRRPRGSGGRFLNTKNLKDGKISLESKKVDNVNLSESTGSQCSVVLQSESGTLNSPNEAKGRGFNLSSSEVPSMFSRGLQRFQISHLRPSMQSL

Query:  AEIIDGGGHGMVLPKWVAAADNCCDLCV
        AEIIDGGGHGMVLPKWVAAADNCCDLCV
Subjt:  AEIIDGGGHGMVLPKWVAAADNCCDLCV

A0A6J1F452 Nuclear transcription factor Y subunit1.5e-16286.06Show/hide
Query:  MAPQTGYLKEHEGIVPNSLGQLSSSPARLWSAFGQGSQTIFGDFGQLKASS-IEQLGSNGKEFTGAKQAAQVSEHGLEKVNTAPFSIYPGDCKNSVDAQK
        MAPQTGYLKEHEG+VPNSLGQLSSSPARLWS +GQG Q+ FGDFGQ+KASS I+QLGSNGKEFTG +QA QV+ HG EK+NTAPFSIYPGDCK SVD QK
Subjt:  MAPQTGYLKEHEGIVPNSLGQLSSSPARLWSAFGQGSQTIFGDFGQLKASS-IEQLGSNGKEFTGAKQAAQVSEHGLEKVNTAPFSIYPGDCKNSVDAQK

Query:  PSPVFSLQSPLSEYHTRFELGFGQPVICANYPCMEQHYGILSAYGPQIPGRVMLPMSLTTDDGPIYVNAKQYHGIIRRRQIRAKAMMENRLARTRKPYMH
        PSP+FSLQSPLSEYH RFELGFGQP++CANYP MEQHYGILSAY PQIPGR+MLPMSLTTDDGPIYVNAKQYHGIIRRR+IRAKAMMENRLA+TRKPYMH
Subjt:  PSPVFSLQSPLSEYHTRFELGFGQPVICANYPCMEQHYGILSAYGPQIPGRVMLPMSLTTDDGPIYVNAKQYHGIIRRRQIRAKAMMENRLARTRKPYMH

Query:  ESRHLHAMRRPRGSGGRFLNTKNLKDGKISLESKKVDNVNLSESTG-SQCSVVLQSESGTLNSPNEAKGRGFNLSSSEVPSMFSRGLQRFQISHLRPSMQ
        ESRHLHAMRRPRGSGGRFLNTKNLK+GK S+E KK++++NLS+STG SQCSVVLQSESG LNSPN  KGRGF+LSSSEV S FSRGLQRFQI+H  PSMQ
Subjt:  ESRHLHAMRRPRGSGGRFLNTKNLKDGKISLESKKVDNVNLSESTG-SQCSVVLQSESGTLNSPNEAKGRGFNLSSSEVPSMFSRGLQRFQISHLRPSMQ

Query:  SLAEIIDGGGHGMVLPKWVAAADNCCDLCV
        SLAEIIDGGGHGMVLPKWVAAADNCCDLCV
Subjt:  SLAEIIDGGGHGMVLPKWVAAADNCCDLCV

A0A6J1IY51 Nuclear transcription factor Y subunit1.2e-15985.45Show/hide
Query:  MAPQTGYLKEHEGIVPNSLGQLSSSPARLWSAFGQGSQTIFGDFGQLKASS-IEQLGSNGKEFTGAKQAAQVSEHGLEKVNTAPFSIYPGDCKNSVDAQK
        MAPQTGYLKEHEG+VPNSLGQLSSSPARLWS +GQG Q+ FGDFGQLKASS I+QLGSNGKEFTG +QA QV+ HG EK+NTAPFSIYPGDCK SVD QK
Subjt:  MAPQTGYLKEHEGIVPNSLGQLSSSPARLWSAFGQGSQTIFGDFGQLKASS-IEQLGSNGKEFTGAKQAAQVSEHGLEKVNTAPFSIYPGDCKNSVDAQK

Query:  PSPVFSLQSPLSEYHTRFELGFGQPVICANYPCMEQHYGILSAYGPQIPGRVMLPMSLTTDDGPIYVNAKQYHGIIRRRQIRAKAMMENRLARTRKPYMH
        PSP+FSLQSPLSEYH RFELGFGQP++CANYP MEQHYGILSAY PQIPGR+MLPMSLTTDDGPIYVNAKQYHGIIRRR+IRAKAMMENRLA+TRKPYMH
Subjt:  PSPVFSLQSPLSEYHTRFELGFGQPVICANYPCMEQHYGILSAYGPQIPGRVMLPMSLTTDDGPIYVNAKQYHGIIRRRQIRAKAMMENRLARTRKPYMH

Query:  ESRHLHAMRRPRGSGGRFLNTKNLKDGKISLESKKVDNVNLSESTG-SQCSVVLQSESGTLNSPNEAKGRGFNLSSSEVPSMFSRGLQRFQISHLRPSMQ
        ESRHLHAMRRPRGSGGRFLNTK LK+GK S+E KK++++NLS+STG SQCSVVLQSESG LNSPNE KGRGF+LSSSEV SMFSRGLQRFQI+HL PS Q
Subjt:  ESRHLHAMRRPRGSGGRFLNTKNLKDGKISLESKKVDNVNLSESTG-SQCSVVLQSESGTLNSPNEAKGRGFNLSSSEVPSMFSRGLQRFQISHLRPSMQ

Query:  SLAEIIDGGGHGMVLPKWVAAADNCCDLCV
        S  EIIDGG HGMVLPKWVAAADNC DLCV
Subjt:  SLAEIIDGGGHGMVLPKWVAAADNCCDLCV

SwissProt top hitse value%identityAlignment
Q8LFU0 Nuclear transcription factor Y subunit A-102.4e-4346.47Show/hide
Query:  FGQLKASSIEQLGSNGKEFTGAKQAAQVSEHGL--EKVNTAPFSIYPGDCKNSVDAQKPSPVFSLQSPLSEYHTRFELGFGQPVICANYPCMEQHYGILS
        FG    ++    G     FTG K     +E G+  ++ +T  F+  PG  K+S D  KP   F++QS        FE GF QP++   +P +EQ+YG++S
Subjt:  FGQLKASSIEQLGSNGKEFTGAKQAAQVSEHGL--EKVNTAPFSIYPGDCKNSVDAQKPSPVFSLQSPLSEYHTRFELGFGQPVICANYPCMEQHYGILS

Query:  AYGPQ-IPGRVMLPMSL-TTDDGPIYVNAKQYHGIIRRRQIRAKAMMENRLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKDGKISLESKKVDNVN
        AYG Q   GRVM+P+ + T +DG IYVN+KQYHGIIRRRQ RAKA    +L+R RKPYMH SRHLHAMRRPRGSGGRFLNTK              D   
Subjt:  AYGPQ-IPGRVMLPMSL-TTDDGPIYVNAKQYHGIIRRRQIRAKAMMENRLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKDGKISLESKKVDNVN

Query:  LSESTGSQCSVVLQSESGTLNSPNEAKGRGFNLSSSEVPSM
         S+ + SQ S V   E+ T+NS  EA     NLS S V SM
Subjt:  LSESTGSQCSVVLQSESGTLNSPNEAKGRGFNLSSSEVPSM

Q8VY64 Nuclear transcription factor Y subunit A-41.6e-2051.4Show/hide
Query:  LSAYGPQIPGRVMLPMSLTTDDGPIYVNAKQYHGIIRRRQIRAKAMMENRLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKDGKISLESKKVDNVN
        L   G Q PG   +P+     + P++VNAKQYHGI+RRRQ RAK    NR  + +KPYMHESRHLHA+RRPRG GGRFLN K  ++G    E +   + N
Subjt:  LSAYGPQIPGRVMLPMSLTTDDGPIYVNAKQYHGIIRRRQIRAKAMMENRLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKDGKISLESKKVDNVN

Query:  LSESTGS
         SE++ S
Subjt:  LSESTGS

Q93ZH2 Nuclear transcription factor Y subunit A-35.5e-2458.25Show/hide
Query:  EQHYG--ILSAYGPQ-----------IPGRVMLPMSLTTDDGPIYVNAKQYHGIIRRRQIRAKAMMENRLARTRKPYMHESRHLHAMRRPRGSGGRFLNT
        + HYG  + + Y PQ           IPGRV LP  LT  D P++VNAKQYH I+RRRQ RAK   +N+L R RKPY+HESRH+HA++RPRGSGGRFLNT
Subjt:  EQHYG--ILSAYGPQ-----------IPGRVMLPMSLTTDDGPIYVNAKQYHGIIRRRQIRAKAMMENRLARTRKPYMHESRHLHAMRRPRGSGGRFLNT

Query:  KNL
        K L
Subjt:  KNL

Q9LNP6 Nuclear transcription factor Y subunit A-82.5e-2138.71Show/hide
Query:  EQHYGIL--SAYGPQIP------GRVMLPMSLTTDDGPIYVNAKQYHGIIRRRQIRAKAMMENRLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKD
        + H+G L  +AY PQ         RV LP  L  ++ P++VNAKQ+H I+RRRQ RAK   +N+L + RKPY+HESRH+HA++RPRGSGGRFLNTK L++
Subjt:  EQHYGIL--SAYGPQIP------GRVMLPMSLTTDDGPIYVNAKQYHGIIRRRQIRAKAMMENRLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKD

Query:  GKISLESKKVDNVNLSESTGSQCSVVLQSESGTLNSPNEAKGRGFNLSSSEVPSMFSRGLQRFQISHLRPSMQSLAEIIDGGGHGM
           S + K+   +    +TG+    VL     + +       R    S+S+  ++F  G   F IS   PS  +    + G  + M
Subjt:  GKISLESKKVDNVNLSESTGSQCSVVLQSESGTLNSPNEAKGRGFNLSSSEVPSMFSRGLQRFQISHLRPSMQSLAEIIDGGGHGM

Q9M9X4 Nuclear transcription factor Y subunit A-29.3e-4039.26Show/hide
Query:  GQLSSSPARLWSAFGQ---GSQTIFGDFGQLKASSIEQLGSNGKEFTGAKQAAQVSEHGLEKVNTAPFSIYPGDCKNSVDAQKP-SPVFSLQSPLSEYHT
        G  S+     W+AFG      +++ GD        +  +G  G+       +A              FS+  GD K+     KP    FS+QSP      
Subjt:  GQLSSSPARLWSAFGQ---GSQTIFGDFGQLKASSIEQLGSNGKEFTGAKQAAQVSEHGLEKVNTAPFSIYPGDCKNSVDAQKP-SPVFSLQSPLSEYHT

Query:  RFELGFGQPVICANYPCME-QHYGILSAYGPQIPGRVMLPMSLTTDDGPIYVNAKQYHGIIRRRQIRAKAM----MENRLARTRKPYMHESRHLHAMRRP
          ELGF QP I   YP  E Q+YG++SAYG Q   RVMLP+++ T+D  IYVN+KQYHGIIRRRQ RAKA      +   +R RKPYMH SRHLHA+RRP
Subjt:  RFELGFGQPVICANYPCME-QHYGILSAYGPQIPGRVMLPMSLTTDDGPIYVNAKQYHGIIRRRQIRAKAM----MENRLARTRKPYMHESRHLHAMRRP

Query:  RGSGGRFLNTK--NLKDGKISLE----SKKVDNVNLSESTGSQCSVVLQSESGTLNSPNEAKGRGFNLSSSEVPSMFSRGLQRFQISHLRPSMQSLAEII
        RGSGGRFLNTK  NL++   + +    S ++ +    + + SQ S V+  E+GT+N  N     G N+S SEV SM            L   + SL    
Subjt:  RGSGGRFLNTK--NLKDGKISLE----SKKVDNVNLSESTGSQCSVVLQSESGTLNSPNEAKGRGFNLSSSEVPSMFSRGLQRFQISHLRPSMQSLAEII

Query:  DGGGHGMVLP-KWVAAA----DNCCD
             GMV+P KW+AAA    + CC+
Subjt:  DGGGHGMVLP-KWVAAA----DNCCD

Arabidopsis top hitse value%identityAlignment
AT1G72830.1 nuclear factor Y, subunit A33.9e-2558.25Show/hide
Query:  EQHYG--ILSAYGPQ-----------IPGRVMLPMSLTTDDGPIYVNAKQYHGIIRRRQIRAKAMMENRLARTRKPYMHESRHLHAMRRPRGSGGRFLNT
        + HYG  + + Y PQ           IPGRV LP  LT  D P++VNAKQYH I+RRRQ RAK   +N+L R RKPY+HESRH+HA++RPRGSGGRFLNT
Subjt:  EQHYG--ILSAYGPQ-----------IPGRVMLPMSLTTDDGPIYVNAKQYHGIIRRRQIRAKAMMENRLARTRKPYMHESRHLHAMRRPRGSGGRFLNT

Query:  KNL
        K L
Subjt:  KNL

AT3G05690.1 nuclear factor Y, subunit A26.6e-4139.26Show/hide
Query:  GQLSSSPARLWSAFGQ---GSQTIFGDFGQLKASSIEQLGSNGKEFTGAKQAAQVSEHGLEKVNTAPFSIYPGDCKNSVDAQKP-SPVFSLQSPLSEYHT
        G  S+     W+AFG      +++ GD        +  +G  G+       +A              FS+  GD K+     KP    FS+QSP      
Subjt:  GQLSSSPARLWSAFGQ---GSQTIFGDFGQLKASSIEQLGSNGKEFTGAKQAAQVSEHGLEKVNTAPFSIYPGDCKNSVDAQKP-SPVFSLQSPLSEYHT

Query:  RFELGFGQPVICANYPCME-QHYGILSAYGPQIPGRVMLPMSLTTDDGPIYVNAKQYHGIIRRRQIRAKAM----MENRLARTRKPYMHESRHLHAMRRP
          ELGF QP I   YP  E Q+YG++SAYG Q   RVMLP+++ T+D  IYVN+KQYHGIIRRRQ RAKA      +   +R RKPYMH SRHLHA+RRP
Subjt:  RFELGFGQPVICANYPCME-QHYGILSAYGPQIPGRVMLPMSLTTDDGPIYVNAKQYHGIIRRRQIRAKAM----MENRLARTRKPYMHESRHLHAMRRP

Query:  RGSGGRFLNTK--NLKDGKISLE----SKKVDNVNLSESTGSQCSVVLQSESGTLNSPNEAKGRGFNLSSSEVPSMFSRGLQRFQISHLRPSMQSLAEII
        RGSGGRFLNTK  NL++   + +    S ++ +    + + SQ S V+  E+GT+N  N     G N+S SEV SM            L   + SL    
Subjt:  RGSGGRFLNTK--NLKDGKISLE----SKKVDNVNLSESTGSQCSVVLQSESGTLNSPNEAKGRGFNLSSSEVPSMFSRGLQRFQISHLRPSMQSLAEII

Query:  DGGGHGMVLP-KWVAAA----DNCCD
             GMV+P KW+AAA    + CC+
Subjt:  DGGGHGMVLP-KWVAAA----DNCCD

AT5G06510.1 nuclear factor Y, subunit A101.7e-4446.47Show/hide
Query:  FGQLKASSIEQLGSNGKEFTGAKQAAQVSEHGL--EKVNTAPFSIYPGDCKNSVDAQKPSPVFSLQSPLSEYHTRFELGFGQPVICANYPCMEQHYGILS
        FG    ++    G     FTG K     +E G+  ++ +T  F+  PG  K+S D  KP   F++QS        FE GF QP++   +P +EQ+YG++S
Subjt:  FGQLKASSIEQLGSNGKEFTGAKQAAQVSEHGL--EKVNTAPFSIYPGDCKNSVDAQKPSPVFSLQSPLSEYHTRFELGFGQPVICANYPCMEQHYGILS

Query:  AYGPQ-IPGRVMLPMSL-TTDDGPIYVNAKQYHGIIRRRQIRAKAMMENRLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKDGKISLESKKVDNVN
        AYG Q   GRVM+P+ + T +DG IYVN+KQYHGIIRRRQ RAKA    +L+R RKPYMH SRHLHAMRRPRGSGGRFLNTK              D   
Subjt:  AYGPQ-IPGRVMLPMSL-TTDDGPIYVNAKQYHGIIRRRQIRAKAMMENRLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKDGKISLESKKVDNVN

Query:  LSESTGSQCSVVLQSESGTLNSPNEAKGRGFNLSSSEVPSM
         S+ + SQ S V   E+ T+NS  EA     NLS S V SM
Subjt:  LSESTGSQCSVVLQSESGTLNSPNEAKGRGFNLSSSEVPSM

AT5G06510.2 nuclear factor Y, subunit A101.7e-4446.47Show/hide
Query:  FGQLKASSIEQLGSNGKEFTGAKQAAQVSEHGL--EKVNTAPFSIYPGDCKNSVDAQKPSPVFSLQSPLSEYHTRFELGFGQPVICANYPCMEQHYGILS
        FG    ++    G     FTG K     +E G+  ++ +T  F+  PG  K+S D  KP   F++QS        FE GF QP++   +P +EQ+YG++S
Subjt:  FGQLKASSIEQLGSNGKEFTGAKQAAQVSEHGL--EKVNTAPFSIYPGDCKNSVDAQKPSPVFSLQSPLSEYHTRFELGFGQPVICANYPCMEQHYGILS

Query:  AYGPQ-IPGRVMLPMSL-TTDDGPIYVNAKQYHGIIRRRQIRAKAMMENRLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKDGKISLESKKVDNVN
        AYG Q   GRVM+P+ + T +DG IYVN+KQYHGIIRRRQ RAKA    +L+R RKPYMH SRHLHAMRRPRGSGGRFLNTK              D   
Subjt:  AYGPQ-IPGRVMLPMSL-TTDDGPIYVNAKQYHGIIRRRQIRAKAMMENRLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKDGKISLESKKVDNVN

Query:  LSESTGSQCSVVLQSESGTLNSPNEAKGRGFNLSSSEVPSM
         S+ + SQ S V   E+ T+NS  EA     NLS S V SM
Subjt:  LSESTGSQCSVVLQSESGTLNSPNEAKGRGFNLSSSEVPSM

AT5G06510.3 nuclear factor Y, subunit A104.3e-4051.55Show/hide
Query:  GDCKNSVDAQKPSPVFSLQSPLSEYHTRFELGFGQPVICANYPCMEQHYGILSAYGPQ-IPGRVMLPMSL-TTDDGPIYVNAKQYHGIIRRRQIRAKAMM
        G  K+S D  KP   F++QS        FE GF QP++   +P +EQ+YG++SAYG Q   GRVM+P+ + T +DG IYVN+KQYHGIIRRRQ RAKA  
Subjt:  GDCKNSVDAQKPSPVFSLQSPLSEYHTRFELGFGQPVICANYPCMEQHYGILSAYGPQ-IPGRVMLPMSL-TTDDGPIYVNAKQYHGIIRRRQIRAKAMM

Query:  ENRLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKDGKISLESKKVDNVNLSESTGSQCSVVLQSESGTLNSPNEAKGRGFNLSSSEVPSM
          +L+R RKPYMH SRHLHAMRRPRGSGGRFLNTK              D    S+ + SQ S V   E+ T+NS  EA     NLS S V SM
Subjt:  ENRLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKDGKISLESKKVDNVNLSESTGSQCSVVLQSESGTLNSPNEAKGRGFNLSSSEVPSM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACCACAAACTGGGTATTTGAAAGAACATGAAGGAATTGTCCCCAATTCCCTTGGTCAGTTGTCATCTTCTCCTGCTCGTCTGTGGAGTGCCTTTGGGCAGGGTTC
CCAAACAATTTTTGGGGATTTTGGTCAGCTCAAGGCTTCCTCCATTGAACAACTTGGGAGTAATGGGAAGGAGTTTACTGGTGCAAAACAAGCTGCCCAGGTTTCTGAGC
ATGGTTTGGAGAAAGTGAACACAGCCCCATTTTCCATCTATCCTGGTGACTGTAAGAATTCTGTGGATGCCCAAAAACCTTCACCAGTTTTCTCCCTGCAATCGCCCTTG
TCAGAATATCATACTCGTTTTGAGCTCGGATTTGGCCAGCCTGTGATATGTGCAAATTATCCTTGCATGGAACAGCATTATGGCATCCTCTCTGCTTATGGACCTCAAAT
ACCAGGACGGGTTATGCTGCCAATGAGTTTAACAACTGATGATGGACCTATTTATGTGAATGCAAAGCAGTACCACGGAATCATTAGGCGCAGGCAGATCCGTGCCAAGG
CAATGATGGAGAACAGGCTTGCAAGAACTCGTAAGCCATATATGCACGAATCACGTCATCTGCACGCGATGCGTCGTCCACGGGGATCTGGTGGCCGTTTCTTGAACACG
AAGAATCTGAAAGATGGGAAAATTTCTTTGGAATCAAAGAAGGTTGATAATGTGAACCTTTCTGAGTCAACTGGTTCCCAATGTTCTGTAGTTCTGCAGTCAGAGAGTGG
AACTTTGAACTCCCCAAATGAAGCAAAGGGGAGAGGTTTCAATCTCTCGAGTTCTGAGGTGCCAAGCATGTTCTCGAGGGGACTGCAACGTTTTCAAATCAGCCATCTCA
GACCATCGATGCAGTCACTGGCAGAGATCATTGATGGAGGAGGGCATGGCATGGTTCTGCCCAAATGGGTTGCAGCAGCTGACAACTGCTGCGACCTTTGTGTT
mRNA sequenceShow/hide mRNA sequence
ATGGCACCACAAACTGGGTATTTGAAAGAACATGAAGGAATTGTCCCCAATTCCCTTGGTCAGTTGTCATCTTCTCCTGCTCGTCTGTGGAGTGCCTTTGGGCAGGGTTC
CCAAACAATTTTTGGGGATTTTGGTCAGCTCAAGGCTTCCTCCATTGAACAACTTGGGAGTAATGGGAAGGAGTTTACTGGTGCAAAACAAGCTGCCCAGGTTTCTGAGC
ATGGTTTGGAGAAAGTGAACACAGCCCCATTTTCCATCTATCCTGGTGACTGTAAGAATTCTGTGGATGCCCAAAAACCTTCACCAGTTTTCTCCCTGCAATCGCCCTTG
TCAGAATATCATACTCGTTTTGAGCTCGGATTTGGCCAGCCTGTGATATGTGCAAATTATCCTTGCATGGAACAGCATTATGGCATCCTCTCTGCTTATGGACCTCAAAT
ACCAGGACGGGTTATGCTGCCAATGAGTTTAACAACTGATGATGGACCTATTTATGTGAATGCAAAGCAGTACCACGGAATCATTAGGCGCAGGCAGATCCGTGCCAAGG
CAATGATGGAGAACAGGCTTGCAAGAACTCGTAAGCCATATATGCACGAATCACGTCATCTGCACGCGATGCGTCGTCCACGGGGATCTGGTGGCCGTTTCTTGAACACG
AAGAATCTGAAAGATGGGAAAATTTCTTTGGAATCAAAGAAGGTTGATAATGTGAACCTTTCTGAGTCAACTGGTTCCCAATGTTCTGTAGTTCTGCAGTCAGAGAGTGG
AACTTTGAACTCCCCAAATGAAGCAAAGGGGAGAGGTTTCAATCTCTCGAGTTCTGAGGTGCCAAGCATGTTCTCGAGGGGACTGCAACGTTTTCAAATCAGCCATCTCA
GACCATCGATGCAGTCACTGGCAGAGATCATTGATGGAGGAGGGCATGGCATGGTTCTGCCCAAATGGGTTGCAGCAGCTGACAACTGCTGCGACCTTTGTGTT
Protein sequenceShow/hide protein sequence
MAPQTGYLKEHEGIVPNSLGQLSSSPARLWSAFGQGSQTIFGDFGQLKASSIEQLGSNGKEFTGAKQAAQVSEHGLEKVNTAPFSIYPGDCKNSVDAQKPSPVFSLQSPL
SEYHTRFELGFGQPVICANYPCMEQHYGILSAYGPQIPGRVMLPMSLTTDDGPIYVNAKQYHGIIRRRQIRAKAMMENRLARTRKPYMHESRHLHAMRRPRGSGGRFLNT
KNLKDGKISLESKKVDNVNLSESTGSQCSVVLQSESGTLNSPNEAKGRGFNLSSSEVPSMFSRGLQRFQISHLRPSMQSLAEIIDGGGHGMVLPKWVAAADNCCDLCV