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MS019433 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019433
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold28:415657..415800
RNA-Seq ExpressionMS019433
SyntenyMS019433
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5473466.1 hypothetical protein F2P56_010075, partial [Juglans regia]1.2e-0461.54Show/hide
Query:  FFSKGGRQTLIPSSLSNLPIYYMSLFKMPIGIANSLEKI
        + SK GR TLI S+LSNLP YY+SLF +P+G+AN +EK+
Subjt:  FFSKGGRQTLIPSSLSNLPIYYMSLFKMPIGIANSLEKI

KAG6631973.1 hypothetical protein CIPAW_13G126100 [Carya illinoinensis]1.4e-0564.1Show/hide
Query:  FFSKGGRQTLIPSSLSNLPIYYMSLFKMPIGIANSLEKI
        + SKGGR TLI S+LSNLP YY+SLF +P+G+AN +EK+
Subjt:  FFSKGGRQTLIPSSLSNLPIYYMSLFKMPIGIANSLEKI

KAG7992074.1 hypothetical protein I3843_02G109700 [Carya illinoinensis]8.9e-0566.67Show/hide
Query:  FFSKGGRQTLIPSSLSNLPIYYMSLFKMPIGIANSLEKI
        + SKGGR TLI S+LSNLP Y++SLF +P G+AN LEKI
Subjt:  FFSKGGRQTLIPSSLSNLPIYYMSLFKMPIGIANSLEKI

RVW36396.1 putative ribonuclease H protein [Vitis vinifera]8.9e-0554.17Show/hide
Query:  KDSSSVESSFFSKGGRQTLIPSSLSNLPIYYMSLFKMPIGIANSLEKI
        +++ S+E+SF SKGGR TLI S+L+++P+Y MSLF+MP  +A  LEK+
Subjt:  KDSSSVESSFFSKGGRQTLIPSSLSNLPIYYMSLFKMPIGIANSLEKI

XP_041011404.1 uncharacterized protein LOC121255192 [Juglans microcarpa x Juglans regia]6.8e-0561.54Show/hide
Query:  FFSKGGRQTLIPSSLSNLPIYYMSLFKMPIGIANSLEKI
        + SKGGR TLI S+LSNLP Y++SLF +P+ +ANS+EK+
Subjt:  FFSKGGRQTLIPSSLSNLPIYYMSLFKMPIGIANSLEKI

TrEMBL top hitse value%identityAlignment
A0A2N9FIJ9 Isopentenyl-diphosphate Delta-isomerase1.9e-0564.1Show/hide
Query:  FFSKGGRQTLIPSSLSNLPIYYMSLFKMPIGIANSLEKI
        + SKGGR TLI S+LSNLP YY+SLF +P+G+A+ +EKI
Subjt:  FFSKGGRQTLIPSSLSNLPIYYMSLFKMPIGIANSLEKI

A0A2N9HCE9 Uncharacterized protein2.5e-0566.67Show/hide
Query:  FFSKGGRQTLIPSSLSNLPIYYMSLFKMPIGIANSLEKI
        + SKGG+ TLI SSLSNLP YY+SLF +P G+AN LEK+
Subjt:  FFSKGGRQTLIPSSLSNLPIYYMSLFKMPIGIANSLEKI

A0A2N9J9F5 Reverse transcriptase domain-containing protein3.3e-0561.54Show/hide
Query:  FFSKGGRQTLIPSSLSNLPIYYMSLFKMPIGIANSLEKI
        + SKGGR TLI S+LSN+P YY+SLF +P+G+A+ +EKI
Subjt:  FFSKGGRQTLIPSSLSNLPIYYMSLFKMPIGIANSLEKI

A0A2N9JAZ9 Reverse transcriptase domain-containing protein3.3e-0561.54Show/hide
Query:  FFSKGGRQTLIPSSLSNLPIYYMSLFKMPIGIANSLEKI
        + SKGGR TLI S+LSN+P YY+SLF +P+G+A+ +EKI
Subjt:  FFSKGGRQTLIPSSLSNLPIYYMSLFKMPIGIANSLEKI

A0A7N2MKD6 Uncharacterized protein2.5e-0561.54Show/hide
Query:  FFSKGGRQTLIPSSLSNLPIYYMSLFKMPIGIANSLEKI
        + SKGGR TLI S+LSNLPIY++SLF +P+ +AN +EK+
Subjt:  FFSKGGRQTLIPSSLSNLPIYYMSLFKMPIGIANSLEKI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAAGACTCTTCAAGTGTGGAAAGCTCTTTTTTCTCCAAAGGAGGCCGCCAAACCCTCATTCCCTCCTCCCTCTCAAACCTTCCCATCTACTATATGTCCTTGTTTAAAAT
GCCAATTGGGATAGCAAATTCTTTGGAAAAAATC
mRNA sequenceShow/hide mRNA sequence
AAAGACTCTTCAAGTGTGGAAAGCTCTTTTTTCTCCAAAGGAGGCCGCCAAACCCTCATTCCCTCCTCCCTCTCAAACCTTCCCATCTACTATATGTCCTTGTTTAAAAT
GCCAATTGGGATAGCAAATTCTTTGGAAAAAATC
Protein sequenceShow/hide protein sequence
KDSSSVESSFFSKGGRQTLIPSSLSNLPIYYMSLFKMPIGIANSLEKI